RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	BNC2	Q6ZN30	1099 aa	Predicted RBP	13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	CCDC80	Q76M96	950 aa		13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	ARPIN	Q7Z6K5	226 aa		13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	SIAH3	Q8IW03	269 aa		13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	CISD2	Q8N5K1	135 aa	Known RBP	13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	ZNF614	Q8N883	585 aa		13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	FADS6	Q8N9I5	356 aa		13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	ZFP62	Q8NB50	900 aa	Predicted RBP	13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	OR2M3	Q8NG83	312 aa		13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	OR52P1P	Q8NH57	321 aa		13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	BBS10	Q8TAM1	723 aa		13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	SH3YL1	Q96HL8	342 aa	Predicted RBP	13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	TMEM41A	Q96HV5	264 aa		13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	JSRP1	Q96MG2	331 aa	Predicted RBP	13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	SH3GL1	Q99961	368 aa		13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	FAM173A	Q9BQD7	235 aa		13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	DOHH	Q9BU89	302 aa		13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	PRR14	Q9BWN1	585 aa		13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	TTTY12	Q9BZ98	90 aa		13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	C1orf21	Q9H246	121 aa		13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	DSN1	Q9H410	356 aa		13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	ALG2	Q9H553	416 aa		13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	MTHFD2L	Q9H903	347 aa	Predicted RBP	13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	SPAG4	Q9NPE6	437 aa		13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	POLE3	Q9NRF9	147 aa		13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	MRTO4	Q9UKD2	239 aa	Known RBP	13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	ABCG2	Q9UNQ0	655 aa		13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	ZNF443	Q9Y2A4	671 aa	Predicted RBP	13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	CARD8	Q9Y2G2	431 aa		13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	KLF13	Q9Y2Y9	288 aa	Predicted RBP	13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	PCDHGB6	Q9Y5F9	930 aa		13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	LIPG	Q9Y5X9	500 aa		13.26	□□□□□ -0.29
MATR3-238	ENST00000512107	IGLV3-32	A0A0A0MS00	114 aa		13.25	□□□□□ -0.29
MATR3-238	ENST00000512107		A0A1W2PQD3	144 aa		13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	ELOVL7	A1L3X0	281 aa		13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	SHISA8	B8ZZ34	492 aa		13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	AP3D1	O14617	1153 aa		13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	HS6ST1	O60243	411 aa		13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	SOX30	O94993	753 aa		13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	PABPC4L	P0CB38	370 aa	Known RBP	13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	PRG2	P13727	222 aa		13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	HSD17B1	P14061	328 aa		13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	GGT1	P19440	569 aa		13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	TNFRSF1B	P20333	461 aa		13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	LCN1	P31025	176 aa		13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	PSMD4	P55036	377 aa	Known RBP	13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	HOXC5	Q00444	222 aa		13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	RBBP4	Q09028	425 aa		13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	KLRB1	Q12918	225 aa		13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	TOMM34	Q15785	309 aa	Predicted RBP	13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	DUSP7	Q16829	419 aa		13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	ZNF324B	Q6AW86	544 aa	Predicted RBP	13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	RPUSD3	Q6P087	351 aa	Known RBP	13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	PGM2L1	Q6PCE3	622 aa		13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	TSPYL5	Q86VY4	417 aa	Predicted RBP	13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	HPS6	Q86YV9	775 aa		13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	LACC1	Q8IV20	430 aa		13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	TMEM251	Q8N6I4	163 aa		13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	TEX19	Q8NA77	164 aa		13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	SMYD1	Q8NB12	490 aa		13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	FAM71C	Q8NEG0	241 aa		13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	UTP4	Q969X6	686 aa	Known RBP	13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	KCTD14	Q9BQ13	255 aa	Predicted RBP	13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	BTBD10	Q9BSF8	475 aa		13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	THTPA	Q9BU02	230 aa		13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	UBQLN3	Q9H347	655 aa		13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	THUMPD1	Q9NXG2	353 aa	Known RBP	13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	SUCO	Q9UBS9	1254 aa	Known RBP	13.25	□□□□□ -0.29
MATR3-238	ENST00000512107	C5orf58	C9J3I9	102 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	CXCR6	O00574	342 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	SCD	O00767	359 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	GSC2	O15499	205 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	NDUFB5	O43674	189 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	TPST2	O60704	377 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	GKN3P	P0CG01	181 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	ATP6V1B2	P21281	511 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	FUT4	P22083	530 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	TCEA1	P23193	301 aa	Known RBP	13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	HTR1E	P28566	365 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	MAGEA5	P43359	124 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	MLLT10	P55197	1068 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	KCNJ2	P63252	427 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	KCNJ10	P78508	379 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	GABPB1	Q06547	395 aa	Predicted RBP	13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	SKP2	Q13309	424 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	SNTA1	Q13424	505 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	MRPL2	Q5T653	305 aa	Known RBP	13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	PRAMEF8	Q5VWM4	474 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	PRAMEF7	Q5VXH5	474 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	TIGD3	Q6B0B8	471 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	ARSK	Q6UWY0	536 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	ASRGL1	Q7L266	308 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	RBM45	Q8IUH3	476 aa	Known RBP	13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	FAM86B1	Q8N7N1	296 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	TMEM178A	Q8NBL3	297 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	OR5M1	Q8NGP8	315 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	PHOSPHO1	Q8TCT1	267 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	WDR60	Q8WVS4	1066 aa		13.24	□□□□□ -0.29
MATR3-238	ENST00000512107	SNRNP40	Q96DI7	357 aa	Known RBP	13.24	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms