RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 CRYL1Q9Y2S2 319 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 SLC6A5Q9Y345 797 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 SAMHD1Q9Y3Z3 626 aaKnown RBP4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 ALG5Q9Y673 324 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 V9GYH0 126 aa4.25□□□□□ -1.73
PDLIM5-211ENST00000508531 NAV1Q8NEY1 1877 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 LOC100506127A0A0U1RQW1 187 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 TCRBV7S3A2A0A539 114 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 FAM234BA2RU67 622 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 RAB19A4D1S5 217 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 POM121BA6NF01 834 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 IFITM10A6NMD0 228 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 A8MV72 311 aaPredicted RBP4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 PDCD5O14737 125 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 MDM4O15151 490 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 LYRM1O43325 122 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 B4GAT1O43505 415 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 KIAA0513O60268 411 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 PQBP1O60828 265 aaKnown RBP4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 SEC22BO75396 215 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 SCO1O75880 301 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 PAK4O96013 591 aaPredicted RBP4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 GLUD1P00367 558 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 CALCAP01258 141 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 IFNA2P01563 188 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 MT-ND1P03886 318 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 HEXAP06865 529 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 ACAA1P09110 424 aaPredicted RBP4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 SLC2A1P11166 492 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 PIPP12273 146 aaPredicted RBP4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 ZNF250P15622 560 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 GGT1P19440 569 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 PVALBP20472 110 aaPredicted RBP4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 UBA1P22314 1058 aaKnown RBP4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 GPX3P22352 226 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 GADD45AP24522 165 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 MT3P25713 68 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 ALDH4A1P30038 563 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 LCN1P31025 176 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 YWHABP31946 246 aaKnown RBP4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 GLUD2P49448 558 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 CDH4P55283 916 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 CDH6P55285 790 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 GMFBP60983 142 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 RAB10P61026 200 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 IL1RL1Q01638 556 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 DHODHQ02127 395 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 CYP24A1Q07973 514 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 ZNF543Q08ER8 600 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 TCP10Q12799 353 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 ILF3Q12906 894 aaKnown RBP eCLIP4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 CHAF1BQ13112 559 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 DMP1Q13316 513 aaPredicted RBP4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 FGFBP1Q14512 234 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 KRT33BQ14525 404 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 SMCO1Q147U7 214 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 NFATC4Q14934 902 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 TRAM2Q15035 370 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 CHRNA6Q15825 494 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 CTU2Q2VPK5 515 aaKnown RBP4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 GLYR1Q49A26 553 aaPredicted RBP4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 PTPN20Q4JDL3 420 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 NHLRC3Q5JS37 347 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 AVPI1Q5T686 147 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 AADACL4Q5VUY2 407 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 MEDAGQ5VYS4 303 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 RNLSQ5VYX0 342 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 SAXO2Q658L1 398 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 RPL13AP3Q6NVV1 102 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 DENND1BQ6P3S1 775 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 HAGHLQ6PII5 290 aaPredicted RBP4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 USP17L6PQ6QN14 398 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 C19orf48Q6RUI8 117 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 SPESP1Q6UW49 350 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 SLC39A5Q6ZMH5 540 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 C3P1Q6ZMU1 363 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 C15orf39Q6ZRI6 1047 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 SSX9Q7RTT3 188 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 DNAJB7Q7Z6W7 309 aaPredicted RBP4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 COMTD1Q86VU5 262 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 TMC8Q8IU68 726 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 PSTKQ8IV42 348 aaKnown RBP4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 SLC44A2Q8IWA5 706 aaPredicted RBP4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 CCDC117Q8IWD4 279 aaPredicted RBP4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 SPATA6LQ8N4H0 392 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 RTL3Q8N8U3 475 aaKnown RBP4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 C7orf57Q8NEG2 295 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 TRPV1Q8NER1 839 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 OR2T4Q8NH00 348 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 METTL6Q8TCB7 284 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 ZNF675Q8TD23 568 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 GPR151Q8TDV0 419 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 SFT2D1Q8WV19 159 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 ASZ1Q8WWH4 475 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 CRYGNQ8WXF5 182 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 RIT1Q92963 219 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 L3HYPDHQ96EM0 354 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 SCMH1Q96GD3 660 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 DIRAS2Q96HU8 199 aa4.24□□□□□ -1.73
PDLIM5-211ENST00000508531 NARS2Q96I59 477 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms