RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, human

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-210	ENST00000507965	FOXE1	O00358	373 aa	Predicted RBP	4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	PPP6C	O00743	305 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	EIF3H	O15372	352 aa	Known RBP eCLIP	4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	SEC14L5	O43304	696 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	ZSCAN12	O43309	604 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	CTIF	O43310	598 aa	Known RBP	4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	SCO2	O43819	266 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	UGDH	O60701	494 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	SEMA3D	O95025	777 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	CLDN9	O95484	217 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	PDYN	P01213	254 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	ALDOA	P04075	364 aa	Known RBP	4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	TSPAN8	P19075	237 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	CRYGS	P22914	178 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	CRABP2	P29373	138 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	SRD5A2	P31213	254 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	STX2	P32856	288 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	ALDH9A1	P49189	494 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	MAPK12	P53778	367 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	GAS1	P54826	345 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	CLDN15	P56746	228 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	B3GALT5-AS1	P59052	145 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	NANOS3	P60323	173 aa	Known RBP	4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	GNG11	P61952	73 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	ILF2	Q12905	390 aa	Known RBP	4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	SF3B4	Q15427	424 aa	Known RBP eCLIP	4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	UAP1	Q16222	522 aa	Predicted RBP	4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	LSM12	Q3MHD2	195 aa	Known RBP	4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	ZNF628	Q5EBL2	1059 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	CCNYL2	Q5T2Q4	361 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	FRG2	Q64ET8	278 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	TTC19	Q6DKK2	380 aa	Predicted RBP	4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	SLC30A6	Q6NXT4	461 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	TMEM81	Q6P7N7	255 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	ZNF474	Q6S9Z5	364 aa	Predicted RBP	4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	ENPP6	Q6UWR7	440 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	NUP54	Q7Z3B4	507 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	LRRC75A-AS1	Q8N1F1	130 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	METTL4	Q8N3J2	472 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	C1orf162	Q8NEQ5	155 aa	Predicted RBP	4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	OR4F6	Q8NGB9	312 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	OR4N2	Q8NGD1	307 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	OR5M1	Q8NGP8	315 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	OR9A2	Q8NGT5	310 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	FIG4	Q92562	907 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	KAT2A	Q92830	837 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	EFHD2	Q96C19	240 aa	Predicted RBP	4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	STARD4	Q96DR4	205 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	PHF21B	Q96EK2	531 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	SLC35A4	Q96G79	324 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	ZNF845	Q96IR2	970 aa	Predicted RBP	4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	ZNF681	Q96N22	645 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	ZFP3	Q96NJ6	502 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	FAM111A	Q96PZ2	611 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	LRRC37B	Q96QE4	947 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	FRG2B	Q96QU4	278 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	SERPINI1	Q99574	410 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	NAPG	Q99747	312 aa	Predicted RBP	4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	ERP44	Q9BS26	406 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	RTN4R	Q9BZR6	473 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	PIGM	Q9H3S5	423 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	FLRT3	Q9NZU0	649 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	XPR1	Q9UBH6	696 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	TRPS1	Q9UHF7	1281 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	ZNF180	Q9UJW8	692 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	SLC12A4	Q9UP95	1085 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	EIF3L	Q9Y262	564 aa	Known RBP	4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	ACOT9	Q9Y305	439 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	SAR1B	Q9Y6B6	198 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	ABCA2	Q9BZC7	2435 aa		4.98	□□□□□ -1.61
ATXN3-210	ENST00000507965	TCRBV5S2	A0A599	114 aa		4.97	□□□□□ -1.61
ATXN3-210	ENST00000507965	C1orf226	A1L170	272 aa		4.97	□□□□□ -1.61
ATXN3-210	ENST00000507965	GOLGA6L10	A6NI86	522 aa		4.97	□□□□□ -1.61
ATXN3-210	ENST00000507965	OR6C70	A6NIJ9	312 aa		4.97	□□□□□ -1.61
ATXN3-210	ENST00000507965	SLC22A20	A6NK97	555 aa		4.97	□□□□□ -1.61
ATXN3-210	ENST00000507965		H3BML4	177 aa		4.97	□□□□□ -1.61
ATXN3-210	ENST00000507965	CASK	O14936	926 aa		4.97	□□□□□ -1.61
ATXN3-210	ENST00000507965	T	O15178	435 aa		4.97	□□□□□ -1.61
ATXN3-210	ENST00000507965	ACOX3	O15254	700 aa		4.97	□□□□□ -1.61
ATXN3-210	ENST00000507965	ARHGEF9	O43307	516 aa		4.97	□□□□□ -1.61
ATXN3-210	ENST00000507965	GMFG	O60234	142 aa		4.97	□□□□□ -1.61
ATXN3-210	ENST00000507965	ZIC3	O60481	467 aa		4.97	□□□□□ -1.61
ATXN3-210	ENST00000507965	TSPAN2	O60636	221 aa		4.97	□□□□□ -1.61
ATXN3-210	ENST00000507965	REM1	O75628	298 aa		4.97	□□□□□ -1.61
ATXN3-210	ENST00000507965	CBR3	O75828	277 aa		4.97	□□□□□ -1.61
ATXN3-210	ENST00000507965	KLHL2	O95198	593 aa		4.97	□□□□□ -1.61
ATXN3-210	ENST00000507965	PLAU	P00749	431 aa		4.97	□□□□□ -1.61
ATXN3-210	ENST00000507965	CGA	P01215	116 aa		4.97	□□□□□ -1.61
ATXN3-210	ENST00000507965	RPS17	P08708	135 aa	Known RBP	4.97	□□□□□ -1.61
ATXN3-210	ENST00000507965	GSTA2	P09210	222 aa		4.97	□□□□□ -1.61
ATXN3-210	ENST00000507965	CT45A8	P0DMV1	189 aa		4.97	□□□□□ -1.61
ATXN3-210	ENST00000507965	CT45A9	P0DMV2	189 aa		4.97	□□□□□ -1.61
ATXN3-210	ENST00000507965	POU2F1	P14859	743 aa		4.97	□□□□□ -1.61
ATXN3-210	ENST00000507965	CHN1	P15882	459 aa		4.97	□□□□□ -1.61
ATXN3-210	ENST00000507965	NAGA	P17050	411 aa		4.97	□□□□□ -1.61
ATXN3-210	ENST00000507965	CSNK2A2	P19784	350 aa	Predicted RBP	4.97	□□□□□ -1.61
ATXN3-210	ENST00000507965	DPP4	P27487	766 aa		4.97	□□□□□ -1.61
ATXN3-210	ENST00000507965	GCK	P35557	465 aa		4.97	□□□□□ -1.61
ATXN3-210	ENST00000507965	UGT2B10	P36537	528 aa		4.97	□□□□□ -1.61
ATXN3-210	ENST00000507965	CD79B	P40259	229 aa		4.97	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms