RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 CALCRP30988 508 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 TIA1P31483 386 aaKnown RBP eCLIP2.82□□□□□ -1.96
TCOF1-208ENST00000506063 GALNSP34059 522 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 EFNB2P52799 333 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 PLA2G16P53816 162 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 NRG3P56975 720 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 SESN2P58004 480 aaPredicted RBP2.82□□□□□ -1.96
TCOF1-208ENST00000506063 BASP1P80723 227 aaKnown RBP2.82□□□□□ -1.96
TCOF1-208ENST00000506063 MRPS11P82912 194 aaKnown RBP2.82□□□□□ -1.96
TCOF1-208ENST00000506063 PLIN5Q00G26 463 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 PAX2Q02962 417 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 PAX8Q06710 450 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 CUL1Q13616 776 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 GLYR1Q49A26 553 aaPredicted RBP2.82□□□□□ -1.96
TCOF1-208ENST00000506063 ARL13AQ5H913 290 aaPredicted RBP2.82□□□□□ -1.96
TCOF1-208ENST00000506063 ZNF311Q5JNZ3 666 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 TMEM201Q5SNT2 666 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 AVPI1Q5T686 147 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 TSTD2Q5T7W7 516 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 PRAMEF9Q5VWM5 478 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 UGT3A1Q6NUS8 523 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 PPP1R21Q6ZMI0 780 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 LHFPL2Q6ZUX7 228 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 RAPH1Q70E73 1250 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 GSTA5Q7RTV2 222 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 MYPOPQ86VE0 399 aaPredicted RBP2.82□□□□□ -1.96
TCOF1-208ENST00000506063 LRRC6Q86X45 466 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 GAS2L3Q86XJ1 694 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 TMEM139Q8IV31 216 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 PARP8Q8N3A8 854 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 OTUD6BQ8N6M0 293 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 GBP7Q8N8V2 638 aaPredicted RBP2.82□□□□□ -1.96
TCOF1-208ENST00000506063 LRRC57Q8N9N7 239 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 PAPD5Q8NDF8 572 aaKnown RBP2.82□□□□□ -1.96
TCOF1-208ENST00000506063 OR2L5Q8NG80 312 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 OR2V1Q8NHB1 315 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 FBXO30Q8TB52 745 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 ACTL9Q8TC94 416 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 WIPF2Q8TF74 440 aaPredicted RBP2.82□□□□□ -1.96
TCOF1-208ENST00000506063 LINC00476Q8WZB0 136 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 RDH5Q92781 318 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 RIT1Q92963 219 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 UPRTQ96BW1 309 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 RAB39BQ96DA2 213 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 SLC47A1Q96FL8 570 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 SLC35A4Q96G79 324 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 SNF8Q96H20 258 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 ZNF300Q96RE9 604 aaPredicted RBP2.82□□□□□ -1.96
TCOF1-208ENST00000506063 TCF12Q99081 682 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 MCMBPQ9BTE3 642 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 HEMGNQ9BXL5 484 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 ITPAQ9BY32 194 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 LACRTQ9GZZ8 138 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 OR10A5Q9H207 317 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 ZNF442Q9H7R0 627 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 CNTD2Q9H8S5 307 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 LRRC40Q9H9A6 602 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 CXorf21Q9HAI6 301 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 MED11Q9P086 117 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 RIMKLBQ9ULI2 386 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 PACSIN2Q9UNF0 486 aaPredicted RBP2.82□□□□□ -1.96
TCOF1-208ENST00000506063 TFR2Q9UP52 801 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 PDE10AQ9Y233 779 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 EFR3BQ9Y2G0 817 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 ZKSCAN5Q9Y2L8 839 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 INSIG2Q9Y5U4 225 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 AUP1Q9Y679 476 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 POMT1Q9Y6A1 747 aa2.82□□□□□ -1.96
TCOF1-208ENST00000506063 IGLV3-32A0A0A0MS00 114 aa2.81□□□□□ -1.96
TCOF1-208ENST00000506063 TRAV40A0A0B4J280 105 aa2.81□□□□□ -1.96
TCOF1-208ENST00000506063 SH3PXD2BA1X283 911 aa2.81□□□□□ -1.96
TCOF1-208ENST00000506063 CTAGE9A4FU28 777 aa2.81□□□□□ -1.96
TCOF1-208ENST00000506063 ERI2A8K979 691 aaKnown RBP2.81□□□□□ -1.96
TCOF1-208ENST00000506063 E9PQ18 207 aa2.81□□□□□ -1.96
TCOF1-208ENST00000506063 AP3B1O00203 1094 aa2.81□□□□□ -1.96
TCOF1-208ENST00000506063 RTCAO00442 366 aaKnown RBP2.81□□□□□ -1.96
TCOF1-208ENST00000506063 CLGNO14967 610 aa2.81□□□□□ -1.96
TCOF1-208ENST00000506063 PFDN6O15212 129 aa2.81□□□□□ -1.96
TCOF1-208ENST00000506063 PSMD3O43242 534 aa2.81□□□□□ -1.96
TCOF1-208ENST00000506063 EFNA2O43921 213 aa2.81□□□□□ -1.96
TCOF1-208ENST00000506063 SYNGR4O95473 234 aa2.81□□□□□ -1.96
TCOF1-208ENST00000506063 IGHV3-9P01782 118 aa2.81□□□□□ -1.96
TCOF1-208ENST00000506063 IGHV4-59P01825 116 aa2.81□□□□□ -1.96
TCOF1-208ENST00000506063 FGGP02679 453 aa2.81□□□□□ -1.96
TCOF1-208ENST00000506063 GSNP06396 782 aa2.81□□□□□ -1.96
TCOF1-208ENST00000506063 F7P08709 466 aaPredicted RBP2.81□□□□□ -1.96
TCOF1-208ENST00000506063 CTAGE8P0CG41 777 aa2.81□□□□□ -1.96
TCOF1-208ENST00000506063 MPC1LP0DKB6 136 aa2.81□□□□□ -1.96
TCOF1-208ENST00000506063 PPIAL4GP0DN37 164 aa2.81□□□□□ -1.96
TCOF1-208ENST00000506063 MTHFD2P13995 350 aa2.81□□□□□ -1.96
TCOF1-208ENST00000506063 CCND1P24385 295 aa2.81□□□□□ -1.96
TCOF1-208ENST00000506063 ATP5A1P25705 553 aaKnown RBP2.81□□□□□ -1.96
TCOF1-208ENST00000506063 LMO1P25800 156 aa2.81□□□□□ -1.96
TCOF1-208ENST00000506063 RBL1P28749 1068 aa2.81□□□□□ -1.96
TCOF1-208ENST00000506063 CD80P33681 288 aa2.81□□□□□ -1.96
TCOF1-208ENST00000506063 THBS4P35443 961 aa2.81□□□□□ -1.96
TCOF1-208ENST00000506063 PPARGP37231 505 aaPredicted RBP2.81□□□□□ -1.96
TCOF1-208ENST00000506063 FDFT1P37268 417 aa2.81□□□□□ -1.96
TCOF1-208ENST00000506063 TTPAP49638 278 aa2.81□□□□□ -1.96
TCOF1-208ENST00000506063 HNRNPH2P55795 449 aaKnown RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms