RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 MMP27Q9H306 513 aa16■□□□□ 0.15
TRAPPC11-204ENST00000505676 ZNF223Q9UK11 482 aaPredicted RBP16■□□□□ 0.15
TRAPPC11-204ENST00000505676 EFCAB7A8K855 629 aa15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 NPIPB9F8W1W9 429 aa15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 GNSP15586 552 aa15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 HTR2AP28223 471 aa15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 NCS1P62166 190 aa15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 DGAT2L6Q6ZPD8 337 aa15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 GID4Q8IVV7 300 aa15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 SLC34A3Q8N130 599 aa15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 SLC41A2Q96JW4 573 aa15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 ART5Q96L15 291 aa15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 DUSP23Q9BVJ7 150 aa15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 OR10A5Q9H207 317 aa15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 UCKL1Q9NWZ5 548 aa15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 SUSD2Q9UGT4 822 aa15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 MRTO4Q9UKD2 239 aaKnown RBP15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 SLC35A3Q9Y2D2 325 aa15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 A0A0B4J2E0 115 aa15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 A0A1B0GX12 115 aa15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 TMEM129A0AVI4 362 aa15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 SURF4O15260 269 aa15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 LYPD3O95274 346 aa15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 BMP7P18075 431 aa15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 NR4A1P22736 598 aa15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 GADD45AP24522 165 aa15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 LIMK1P53667 647 aa15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 PSPHP78330 225 aa15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 GPR135Q8IZ08 494 aa15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 ANKK1Q8NFD2 765 aa15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 OR8D4Q8NGM9 314 aa15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 SH3YL1Q96HL8 342 aaPredicted RBP15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 PRR14Q9BWN1 585 aa15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 CBLCQ9ULV8 474 aa15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 TDRD6O60522 2096 aaKnown RBP15.99■□□□□ 0.15
TRAPPC11-204ENST00000505676 CENPVL1A0A0U1RR11 272 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 H3BMH7 237 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 TGFBR3LH3BV60 316 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 POLR1CO15160 346 aaPredicted RBP15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 SDC3O75056 442 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 MAT1AQ00266 395 aaKnown RBP15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 HOXC5Q00444 222 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 DSG2Q14126 1118 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 NXNL2Q5VZ03 156 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 BMP8AQ7Z5Y6 402 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 OR52I1Q8NGK6 324 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 SLC46A1Q96NT5 459 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 CNPPD1Q9BV87 410 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 JAM3Q9BX67 310 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 RBCK1Q9BYM8 510 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 SPRTNQ9H040 489 aaPredicted RBP15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 FBXO34Q9NWN3 711 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 COLQQ9Y215 455 aaPredicted RBP15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 C19orf67A6NJJ6 358 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 IFNA16P05015 189 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 SSTR4P31391 388 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 GCGRP47871 477 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 MTNR1AP48039 350 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 DCAF7P61962 342 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 PDZK1Q5T2W1 519 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 TUBA3EQ6PEY2 450 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 ZNF615Q8N8J6 731 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 OR6Q1Q8NGQ2 317 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 FNDC8Q8TC99 324 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 LRFN5Q96NI6 719 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 ELF4Q99607 663 aaPredicted RBP15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 NDC1Q9BTX1 674 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 SLIRPQ9GZT3 109 aaKnown RBP15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 DSN1Q9H410 356 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 SIDT1Q9NXL6 827 aaKnown RBP15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 DNAJB12Q9NXW2 375 aaKnown RBP15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 SERTAD3Q9UJW9 196 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 ERVK-19Q9WJR5 959 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 OR10H1Q9Y4A9 318 aa15.98■□□□□ 0.15
TRAPPC11-204ENST00000505676 SOX1O00570 391 aaPredicted RBP15.97■□□□□ 0.15
TRAPPC11-204ENST00000505676 HCN1O60741 890 aa15.97■□□□□ 0.15
TRAPPC11-204ENST00000505676 HSMCR30P0CW71 290 aa15.97■□□□□ 0.15
TRAPPC11-204ENST00000505676 PSMA1P25786 263 aaKnown RBP15.97■□□□□ 0.15
TRAPPC11-204ENST00000505676 ADH7P40394 386 aa15.97■□□□□ 0.15
TRAPPC11-204ENST00000505676 GPR4P46093 362 aa15.97■□□□□ 0.15
TRAPPC11-204ENST00000505676 LSM11P83369 360 aaKnown RBP eCLIP15.97■□□□□ 0.15
TRAPPC11-204ENST00000505676 SQSTM1Q13501 440 aa15.97■□□□□ 0.15
TRAPPC11-204ENST00000505676 C16orf87Q6PH81 154 aa15.97■□□□□ 0.15
TRAPPC11-204ENST00000505676 ZNF527Q8NB42 609 aa15.97■□□□□ 0.15
TRAPPC11-204ENST00000505676 C16orf52Q8NHV5 167 aa15.97■□□□□ 0.15
TRAPPC11-204ENST00000505676 FANK1Q8TC84 345 aa15.97■□□□□ 0.15
TRAPPC11-204ENST00000505676 ZNF426Q9BUY5 554 aa15.97■□□□□ 0.15
TRAPPC11-204ENST00000505676 AKIP1Q9NQ31 210 aa15.97■□□□□ 0.15
TRAPPC11-204ENST00000505676 LANCL2Q9NS86 450 aa15.97■□□□□ 0.15
TRAPPC11-204ENST00000505676 H2AFY2Q9P0M6 372 aaPredicted RBP15.97■□□□□ 0.15
TRAPPC11-204ENST00000505676 DSCR3O14972 297 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 YKT6O15498 198 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 CSO75390 466 aaKnown RBP15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 PRG2P13727 222 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 SOX6P35712 828 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 GPR143P51810 404 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 OR1D5P58170 312 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 LSM3P62310 102 aaKnown RBP15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 BTG2P78543 158 aa15.96■□□□□ 0.15
TRAPPC11-204ENST00000505676 TSTQ16762 297 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms