RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 ASPMQ8IZT6 3477 aa9.55□□□□□ -0.88
TPM3-217ENST00000504663 SERINC4A6NH21 518 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 H0YJX3 145 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 PPM1BO75688 479 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 HPP00738 406 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 CD63P08962 238 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 ITGAMP11215 1152 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 WT1P19544 449 aaPredicted RBP9.54□□□□□ -0.88
TPM3-217ENST00000504663 TBXA2RP21731 343 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 MST1P26927 711 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 LCN1P31025 176 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 DNAJA1P31689 397 aaKnown RBP9.54□□□□□ -0.88
TPM3-217ENST00000504663 PTGDSP41222 190 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 RFX3P48380 749 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 DAPP51397 102 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 GAS1P54826 345 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 PLCXD2Q0VAA5 305 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 CHAF1BQ13112 559 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 SKP2Q13309 424 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 PIN1Q13526 163 aaPredicted RBP9.54□□□□□ -0.88
TPM3-217ENST00000504663 DAG1Q14118 895 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 GANABQ14697 944 aaKnown RBP9.54□□□□□ -0.88
TPM3-217ENST00000504663 SSPNQ14714 243 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 LARS2Q15031 903 aaKnown RBP9.54□□□□□ -0.88
TPM3-217ENST00000504663 TGIF1Q15583 401 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 DECR1Q16698 335 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 EXOC3L2Q2M3D2 409 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 CMPK2Q5EBM0 449 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 WDR88Q6ZMY6 472 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 DEF8Q6ZN54 512 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 CYP4Z1Q86W10 505 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 SVOPLQ8N434 492 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 PSMF1Q92530 271 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 EME1Q96AY2 570 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 NRBF2Q96F24 287 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 NODALQ96S42 347 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 ZNF347Q96SE7 839 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 MBOAT4Q96T53 435 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 ZNF184Q99676 751 aaPredicted RBP9.54□□□□□ -0.88
TPM3-217ENST00000504663 PRSS27Q9BQR3 290 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 C9orf16Q9BUW7 83 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 SMURF2Q9HAU4 748 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 ZNF160Q9HCG1 818 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 RHCGQ9UBD6 479 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 MYOTQ9UBF9 498 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 FBXL4Q9UKA2 621 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 CDV3Q9UKY7 258 aaKnown RBP9.54□□□□□ -0.88
TPM3-217ENST00000504663 TMA7Q9Y2S6 64 aaKnown RBP9.54□□□□□ -0.88
TPM3-217ENST00000504663 OR10H1Q9Y4A9 318 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 U3KQV3 271 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 PCNX3Q9H6A9 2034 aa9.54□□□□□ -0.88
TPM3-217ENST00000504663 A0A1W2PQD3 144 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 DCDC2BA2VCK2 349 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 OR6C70A6NIJ9 312 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 WWP2O00308 870 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 AP3D1O14617 1153 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 ADAMDEC1O15204 470 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 FMO6PO60774 539 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 MITFO75030 526 aaPredicted RBP9.53□□□□□ -0.88
TPM3-217ENST00000504663 ZFAND5O76080 213 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 HPRP00739 348 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 GKN3PP0CG01 181 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 LIFP15018 202 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 IL7RP16871 459 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 ZNF23P17027 643 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 ITGA2P17301 1181 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 ATP6V1C1P21283 382 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 PRKACGP22612 351 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 CBLP22681 906 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 OTX2P32243 289 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 ALDH3A2P51648 485 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 PNLIPRP2P54317 469 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 PSMD4P55036 377 aaKnown RBP9.53□□□□□ -0.88
TPM3-217ENST00000504663 CDH12P55289 794 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 RGS8P57771 180 aaPredicted RBP9.53□□□□□ -0.88
TPM3-217ENST00000504663 FBXW4P57775 412 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 PSPHP78330 225 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 SPIBQ01892 262 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 ATP1A4Q13733 1029 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 EXT1Q16394 746 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 BTBD16Q32M84 506 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 EIPR1Q53HC9 387 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 NHSL2Q5HYW2 709 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 WLSQ5T9L3 541 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 KDM4DQ6B0I6 523 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 H3F3CQ6NXT2 135 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 ZBTB49Q6ZSB9 765 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 CHERPQ8IWX8 916 aaKnown RBP9.53□□□□□ -0.88
TPM3-217ENST00000504663 CMIPQ8IY22 773 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 GALNT4Q8N4A0 578 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 CATSPER1Q8NEC5 780 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 SLC7A13Q8TCU3 470 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 GRHL3Q8TE85 626 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 THAP3Q8WTV1 239 aaPredicted RBP9.53□□□□□ -0.88
TPM3-217ENST00000504663 DNAJC9Q8WXX5 260 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 SLC35B4Q969S0 331 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 NACC2Q96BF6 587 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 ZNF570Q96NI8 536 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 RASL10BQ96S79 203 aa9.53□□□□□ -0.88
TPM3-217ENST00000504663 ADOQ96SZ5 270 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms