RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 LSM11P83369 360 aaKnown RBP eCLIP4.83□□□□□ -1.64
CLDND1-208ENST00000503004 CDK3Q00526 305 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 CSTF1Q05048 431 aaKnown RBP4.83□□□□□ -1.64
CLDND1-208ENST00000503004 DPTQ07507 201 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 ST3GAL4Q11206 333 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 RPA4Q13156 261 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 GPR19Q15760 415 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 ZNF630Q2M218 657 aaPredicted RBP4.83□□□□□ -1.64
CLDND1-208ENST00000503004 TMEM44Q2T9K0 475 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 WSCD2Q2TBF2 565 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 FAM76BQ5HYJ3 339 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 CRB2Q5IJ48 1285 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 KHDRBS2Q5VWX1 349 aaKnown RBP4.83□□□□□ -1.64
CLDND1-208ENST00000503004 USP53Q70EK8 1073 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 WDR53Q7Z5U6 358 aaPredicted RBP4.83□□□□□ -1.64
CLDND1-208ENST00000503004 PDZD3Q86UT5 571 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 LAX1Q8IWV1 398 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 LINC01555Q8NAE3 123 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 TMIEQ8NEW7 156 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 OR5D16Q8NGK9 328 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 GEMIN6Q8WXD5 167 aaKnown RBP4.83□□□□□ -1.64
CLDND1-208ENST00000503004 FGF13Q92913 245 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 TCEAL3Q969E4 200 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 TM4SF18Q96CE8 201 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 TMEM19Q96HH6 336 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 ZNF514Q96K75 400 aaPredicted RBP4.83□□□□□ -1.64
CLDND1-208ENST00000503004 LINC00615Q96LM1 132 aaPredicted RBP4.83□□□□□ -1.64
CLDND1-208ENST00000503004 IL4I1Q96RQ9 567 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 VRK1Q99986 396 aaPredicted RBP4.83□□□□□ -1.64
CLDND1-208ENST00000503004 MED18Q9BUE0 208 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 NLNQ9BYT8 704 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 ABCB9Q9NP78 766 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 LHX9Q9NQ69 397 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 MBNL1Q9NR56 388 aaKnown RBP4.83□□□□□ -1.64
CLDND1-208ENST00000503004 CTPS2Q9NRF8 586 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 UFSP2Q9NUQ7 469 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 MS4A12Q9NXJ0 267 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 ASH2LQ9UBL3 628 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 MLXQ9UH92 298 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 UBQLN2Q9UHD9 624 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 PURGQ9UJV8 347 aaKnown RBP4.83□□□□□ -1.64
CLDND1-208ENST00000503004 HCN2Q9UL51 889 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 GPR34Q9UPC5 381 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 POFUT2Q9Y2G5 429 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 BRWD1Q9NSI6 2320 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 PNMA8CA0A1B0GUJ8 204 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 A0A1W2PPL8 197 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 TCRBV16S1A1N1A0A5B0 115 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 OR52A4PA6NMU1 304 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 ZNF729A6NN14 1252 aaPredicted RBP4.83□□□□□ -1.64
CLDND1-208ENST00000503004 C2orf74A8MZ97 194 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 FABP7O15540 132 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 OR1F1O43749 312 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 AKAP8O43823 692 aaKnown RBP4.83□□□□□ -1.64
CLDND1-208ENST00000503004 DPM1O60762 260 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 APOL3O95236 402 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 TGM6O95932 706 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 IFNW1P05000 195 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 RB1P06400 928 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 RD3LP0DJH9 198 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 ARAFP10398 606 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 ACP5P13686 325 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 ANXA8P13928 327 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 GABRB1P18505 474 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 COL9A1P20849 921 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 CD72P21854 359 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 S100PP25815 95 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 DRD3P35462 400 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 RAD52P43351 418 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 TAS2R38P59533 333 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 RBBP4Q09028 425 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 MAB21L1Q13394 359 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 SEC23BQ15437 767 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 MED22Q15528 200 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 ZNF79Q15937 498 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 SYPL1Q16563 259 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 TMEM240Q5SV17 173 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 FAM109BQ6ICB4 259 aaPredicted RBP4.83□□□□□ -1.64
CLDND1-208ENST00000503004 SLC25A25Q6KCM7 469 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 REEP3Q6NUK4 255 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 TCTN3Q6NUS6 607 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 BHLHB9Q6PI77 547 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 DEF8Q6ZN54 512 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 BCDIN3DQ7Z5W3 292 aaKnown RBP4.83□□□□□ -1.64
CLDND1-208ENST00000503004 ZNF605Q86T29 641 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 COMTD1Q86VU5 262 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 DCUN1D3Q8IWE4 304 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 KRT78Q8N1N4 520 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 STX19Q8N4C7 294 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 B3GNT7Q8NFL0 401 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 KBTBD8Q8NFY9 601 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 GPR32P1Q8NGA4 272 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 OR11H4Q8NGC9 324 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 OR4D11Q8NGI4 311 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 OR8D4Q8NGM9 314 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 OR5K2Q8NHB8 316 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 ZNF675Q8TD23 568 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 WFIKKN2Q8TEU8 576 aa4.83□□□□□ -1.64
CLDND1-208ENST00000503004 ZNF431Q8TF32 576 aaPredicted RBP4.83□□□□□ -1.64
CLDND1-208ENST00000503004 SLC39A7Q92504 469 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms