RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	SLC22A8	Q8TCC7	542 aa		11.15	□□□□□ -0.62
MATR3-231	ENST00000502394	NRG4	Q8WWG1	115 aa		11.15	□□□□□ -0.62
MATR3-231	ENST00000502394	CNOT9	Q92600	299 aa	Known RBP	11.15	□□□□□ -0.62
MATR3-231	ENST00000502394	TTC9	Q92623	222 aa		11.15	□□□□□ -0.62
MATR3-231	ENST00000502394	FGF11	Q92914	225 aa		11.15	□□□□□ -0.62
MATR3-231	ENST00000502394	FAM122A	Q96E09	287 aa		11.15	□□□□□ -0.62
MATR3-231	ENST00000502394	CENPN	Q96H22	339 aa	Predicted RBP	11.15	□□□□□ -0.62
MATR3-231	ENST00000502394	DHRS1	Q96LJ7	313 aa		11.15	□□□□□ -0.62
MATR3-231	ENST00000502394	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	11.15	□□□□□ -0.62
MATR3-231	ENST00000502394	RLIM	Q9NVW2	624 aa		11.15	□□□□□ -0.62
MATR3-231	ENST00000502394	DNAJB12	Q9NXW2	375 aa	Known RBP	11.15	□□□□□ -0.62
MATR3-231	ENST00000502394	VNN3	Q9NY84	501 aa		11.15	□□□□□ -0.62
MATR3-231	ENST00000502394	DNAJB9	Q9UBS3	223 aa		11.15	□□□□□ -0.62
MATR3-231	ENST00000502394	SLC9A8	Q9Y2E8	581 aa		11.15	□□□□□ -0.62
MATR3-231	ENST00000502394	YARS2	Q9Y2Z4	477 aa	Known RBP	11.15	□□□□□ -0.62
MATR3-231	ENST00000502394	SH3GLB1	Q9Y371	365 aa		11.15	□□□□□ -0.62
MATR3-231	ENST00000502394		J3KTA2	159 aa		11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	FFAR1	O14842	300 aa		11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	EFS	O43281	561 aa		11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	FRS3	O43559	492 aa		11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	ADAM11	O75078	769 aa		11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	ITGA10	O75578	1167 aa		11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	CST1	P01037	141 aa		11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	IFNW1	P05000	195 aa		11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	RHCE	P18577	417 aa		11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	KRT20	P35900	424 aa		11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	TMED10	P49755	219 aa	Known RBP	11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	GAS1	P54826	345 aa		11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	FBXW4	P57775	412 aa		11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	AIMP2	Q13155	320 aa	Known RBP	11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	CD226	Q15762	336 aa		11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	SNCB	Q16143	134 aa		11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	OGFRL1	Q5TC84	451 aa	Predicted RBP	11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	OR2T5	Q6IEZ7	315 aa		11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	TMEM81	Q6P7N7	255 aa		11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	NUP54	Q7Z3B4	507 aa		11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	EPHX4	Q8IUS5	362 aa		11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	SLC5A8	Q8N695	610 aa		11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	OR2T29	Q8NH02	315 aa		11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	BRIX1	Q8TDN6	353 aa	Known RBP	11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	THAP4	Q8WY91	577 aa		11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	SPACA9	Q96E40	222 aa	Predicted RBP	11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	FER1L6-AS2	Q96M78	137 aa		11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	NODAL	Q96S42	347 aa		11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	ZNF347	Q96SE7	839 aa		11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	RTN4R	Q9BZR6	473 aa		11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	CDCP1	Q9H5V8	836 aa		11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	CACYBP	Q9HB71	228 aa	Known RBP	11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	SH2D2A	Q9NP31	389 aa		11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	STOML1	Q9UBI4	398 aa		11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	A4GNT	Q9UNA3	340 aa		11.14	□□□□□ -0.63
MATR3-231	ENST00000502394	DOCK10	Q96BY6	2186 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	ZNF891	A8MT65	544 aa	Predicted RBP	11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	NKX2-8	O15522	239 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	OIP5	O43482	229 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	HS6ST1	O60243	411 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	FMO6P	O60774	539 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	OR6B1	O95007	311 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	DIRAS1	O95057	198 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	ITGA2	P17301	1181 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	FUT4	P22083	530 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	EVI2B	P34910	448 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	PTGDS	P41222	190 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	SOX3	P41225	446 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	ACAA2	P42765	397 aa	Known RBP	11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	ID4	P47928	161 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	LIMS1	P48059	325 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	HMGA2	P52926	109 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	SKP2	Q13309	424 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	FCRLB	Q6BAA4	426 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	OPN5	Q6U736	354 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	DND1	Q8IYX4	353 aa	Known RBP	11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	ZNF527	Q8NB42	609 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	ZNF248	Q8NDW4	579 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	PIK3C3	Q8NEB9	887 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	OR4C15	Q8NGM1	316 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	VANGL1	Q8TAA9	524 aa	Predicted RBP	11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	GRHL3	Q8TE85	626 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	KCNE4	Q8WWG9	221 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	THOC3	Q96J01	351 aa	Known RBP	11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	PIP5K1A	Q99755	562 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	FUZ	Q9BT04	418 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	BDH2	Q9BUT1	245 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	DPH1	Q9BZG8	443 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	SEMA6A	Q9H2E6	1030 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	ZBTB20	Q9HC78	741 aa	Predicted RBP	11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	ATP13A2	Q9NQ11	1180 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	EXOSC3	Q9NQT5	275 aa	Known RBP	11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	KLHL28	Q9NXS3	571 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	SLC35A3	Q9Y2D2	325 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	NIN	Q8N4C6	2090 aa		11.13	□□□□□ -0.63
MATR3-231	ENST00000502394	SPTBN4	Q9H254	2564 aa		11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	MED13	Q9UHV7	2174 aa		11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	SCD	O00767	359 aa		11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	LYPD3	O95274	346 aa		11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	CSTA	P01040	98 aa		11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	ADRB1	P08588	477 aa		11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	PRG2	P13727	222 aa		11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	HTR2A	P28223	471 aa		11.12	□□□□□ -0.63
MATR3-231	ENST00000502394	PEX2	P28328	305 aa		11.12	□□□□□ -0.63

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