RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 CRISP1P54107 249 aa16.41■□□□□ 0.22
CHRNA4-206ENST00000498043 EMP2P54851 167 aa16.41■□□□□ 0.22
CHRNA4-206ENST00000498043 PSMD4P55036 377 aaKnown RBP16.41■□□□□ 0.22
CHRNA4-206ENST00000498043 NR1H2P55055 460 aa16.41■□□□□ 0.22
CHRNA4-206ENST00000498043 ESRRGP62508 458 aa16.41■□□□□ 0.22
CHRNA4-206ENST00000498043 SMN1Q16637 294 aaKnown RBP16.41■□□□□ 0.22
CHRNA4-206ENST00000498043 FAM199XQ6PEV8 388 aaPredicted RBP16.41■□□□□ 0.22
CHRNA4-206ENST00000498043 SLC29A4Q7RTT9 530 aa16.41■□□□□ 0.22
CHRNA4-206ENST00000498043 GATSQ8NAP1 163 aa16.41■□□□□ 0.22
CHRNA4-206ENST00000498043 SLC39A1Q9NY26 324 aa16.41■□□□□ 0.22
CHRNA4-206ENST00000498043 TEX51A0A1B0GUA7 166 aa16.4■□□□□ 0.22
CHRNA4-206ENST00000498043 TRAPPC13A5PLN9 417 aa16.4■□□□□ 0.22
CHRNA4-206ENST00000498043 SYNDIG1LA6NDD5 238 aa16.4■□□□□ 0.22
CHRNA4-206ENST00000498043 IL33O95760 270 aa16.4■□□□□ 0.22
CHRNA4-206ENST00000498043 ONECUT2O95948 504 aa16.4■□□□□ 0.22
CHRNA4-206ENST00000498043 SLC5A2P31639 672 aa16.4■□□□□ 0.22
CHRNA4-206ENST00000498043 CCKBRP32239 447 aa16.4■□□□□ 0.22
CHRNA4-206ENST00000498043 NR0B1P51843 470 aaKnown RBP16.4■□□□□ 0.22
CHRNA4-206ENST00000498043 TUBA4AP68366 448 aa16.4■□□□□ 0.22
CHRNA4-206ENST00000498043 C1orf94Q6P1W5 598 aa16.4■□□□□ 0.22
CHRNA4-206ENST00000498043 RRM2BQ7LG56 351 aa16.4■□□□□ 0.22
CHRNA4-206ENST00000498043 GRHL3Q8TE85 626 aa16.4■□□□□ 0.22
CHRNA4-206ENST00000498043 APH1BQ8WW43 257 aa16.4■□□□□ 0.22
CHRNA4-206ENST00000498043 ACOT11Q8WXI4 607 aaPredicted RBP16.4■□□□□ 0.22
CHRNA4-206ENST00000498043 FAM46AQ96IP4 442 aaKnown RBP16.4■□□□□ 0.22
CHRNA4-206ENST00000498043 CMKLR1Q99788 373 aa16.4■□□□□ 0.22
CHRNA4-206ENST00000498043 TMEM9BQ9NQ34 198 aa16.4■□□□□ 0.22
CHRNA4-206ENST00000498043 FBXO8Q9NRD0 319 aa16.4■□□□□ 0.22
CHRNA4-206ENST00000498043 BLOC1S6Q9UL45 172 aa16.4■□□□□ 0.22
CHRNA4-206ENST00000498043 SAGE2PA6NJ88 616 aa16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 ZAR1LA6NP61 321 aa16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 KRT20P35900 424 aa16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 DESI1Q6ICB0 168 aa16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 WDR88Q6ZMY6 472 aa16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 PRICKLE2Q7Z3G6 844 aa16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 GRAMD2AQ8IUY3 354 aa16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 APLFQ8IW19 511 aaPredicted RBP16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 SUMF1Q8NBK3 374 aa16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 PIGXQ8TBF5 258 aa16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 ADOQ96SZ5 270 aa16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 LIN28AQ9H9Z2 209 aaKnown RBP16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 IMPAD1Q9NX62 359 aa16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 TUBA8Q9NY65 449 aaPredicted RBP16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 SERINC4A6NH21 518 aa16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 FMO6PO60774 539 aa16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 ABCB7O75027 752 aa16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 CBFA2T3O75081 653 aa16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 WBP4O75554 376 aaKnown RBP16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 OR6B1O95007 311 aa16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 CSTAP01040 98 aa16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 DCAF7P61962 342 aa16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 ALDH6A1Q02252 535 aaKnown RBP16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 MRPL14Q6P1L8 145 aaKnown RBP16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 NRMQ8IXM6 262 aa16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 MR1Q95460 341 aa16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 C8orf44Q96CB5 159 aa16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 PRSS27Q9BQR3 290 aa16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 ZNF559Q9BR84 538 aa16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 SLC26A1Q9H2B4 701 aa16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 PAK1IP1Q9NWT1 392 aaPredicted RBP16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 LOXL2Q9Y4K0 774 aa16.39■□□□□ 0.21
CHRNA4-206ENST00000498043 TRIM64CA6NLI5 447 aa16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 OR6C76A6NM76 312 aa16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 PTGES3LE9PB15 166 aa16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 UTS2O95399 124 aa16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 TP53P04637 393 aaPredicted RBP16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 HPGDP15428 266 aa16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 IL12BP29460 328 aa16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 IFNGR2P38484 337 aa16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 GPR4P46093 362 aa16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 GPR143P51810 404 aa16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 PIGFQ07326 219 aa16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 PLCXD2Q0VAA5 305 aa16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 TOP3AQ13472 1001 aaPredicted RBP16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 PAPD4Q6PIY7 484 aaKnown RBP16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 ZNF773Q6PK81 442 aa16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 B3GNT7Q8NFL0 401 aa16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 ZNF566Q969W8 418 aa16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 RHNO1Q9BSD3 238 aa16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 POLR2J2Q9GZM3 115 aaKnown RBP16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 UBQLN4Q9NRR5 601 aa16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 AKAP7Q9P0M2 348 aaPredicted RBP16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 GPN3Q9UHW5 284 aaPredicted RBP16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 ZNF223Q9UK11 482 aaPredicted RBP16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 PMS2P1A4D2B8 440 aa16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 ICOSLGO75144 302 aa16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 REM1O75628 298 aa16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 KLK3P07288 261 aaPredicted RBP16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 CCDC159P0C7I6 412 aa16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 ETV5P41161 510 aa16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 ACAA2P42765 397 aaKnown RBP16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 OMPP47874 163 aa16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 GABARAPL2P60520 117 aa16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 CDC42P60953 191 aa16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 KLHL26Q53HC5 615 aa16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 FAM198BQ6UWH4 519 aa16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 MBOAT2Q6ZWT7 520 aa16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 CCDC103Q8IW40 242 aa16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 CMIPQ8IY22 773 aa16.38■□□□□ 0.21
CHRNA4-206ENST00000498043 IQCF1Q8N6M8 205 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms