RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 EFHC1Q5JVL4 640 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 DCAF12Q5T6F0 453 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 DDI2Q5TDH0 399 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 EEF1A1P5Q5VTE0 462 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 AGAP7PQ5VUJ5 663 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 WSCD1Q658N2 575 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 FAM171BQ6P995 826 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 TTC23LQ6PF05 361 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 BHLHB9Q6PI77 547 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 UNQ6126/PRO20091Q6UXV3 157 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 MOB3BQ86TA1 216 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 PLD3Q8IV08 490 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 VRK3Q8IV63 474 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 RBMXL3Q8N7X1 1067 aaKnown RBP5.36□□□□□ -1.55
BRCA1-224ENST00000497488 C8orf46Q8TAG6 207 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 C17orf50Q8WW18 174 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 ARNTL2Q8WYA1 636 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 SMG7Q92540 1137 aaKnown RBP5.36□□□□□ -1.55
BRCA1-224ENST00000497488 MRPL24Q96A35 216 aaKnown RBP5.36□□□□□ -1.55
BRCA1-224ENST00000497488 PNPLA2Q96AD5 504 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 MTBPQ96DY7 904 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 ELMO2Q96JJ3 720 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 ART5Q96L15 291 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 C12orf42Q96LP6 360 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 AGAP4Q96P64 663 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 SLC30A2Q9BRI3 323 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 TTYH2Q9BSA4 534 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 SLC25A33Q9BSK2 321 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 RPP25Q9BUL9 199 aaKnown RBP5.36□□□□□ -1.55
BRCA1-224ENST00000497488 ROGDIQ9GZN7 287 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 SLC25A51Q9H1U9 297 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 PNO1Q9NRX1 252 aaKnown RBP5.36□□□□□ -1.55
BRCA1-224ENST00000497488 STX18Q9P2W9 335 aaKnown RBP5.36□□□□□ -1.55
BRCA1-224ENST00000497488 MBD2Q9UBB5 411 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 ANAPC7Q9UJX3 599 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 MAN1B1Q9UKM7 699 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 PRDM4Q9UKN5 801 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 IKZF2Q9UKS7 526 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 NPIPA1Q9UND3 350 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 GAB2Q9UQC2 676 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 MYO3BQ8WXR4 1341 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 ADAMTS20P59510 1910 aa5.36□□□□□ -1.55
BRCA1-224ENST00000497488 RGPD5Q99666 1765 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 CRB1P82279 1406 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 NSD3Q9BZ95 1437 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 TMEM272A0A1B0GTI8 110 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 LRP5LA4QPB2 252 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 ANXA9O76027 345 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 NDUFB8O95169 186 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 TPM3P06753 285 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 ADORA3P0DMS8 318 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 NEFHP12036 1026 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 PGCP20142 388 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 EFNA1P20827 205 aaPredicted RBP5.35□□□□□ -1.55
BRCA1-224ENST00000497488 LCN1P31025 176 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 FHITP49789 147 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 PLTPP55058 493 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 CDH11P55287 796 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 TUBA3CQ13748 450 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 ITIH4Q14624 930 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 ATXN7L3Q14CW9 347 aaPredicted RBP5.35□□□□□ -1.55
BRCA1-224ENST00000497488 ZNF124Q15973 351 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 SNAI3Q3KNW1 292 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 FGD3Q5JSP0 725 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 FNBP1LQ5T0N5 605 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 LCE3BQ5TA77 95 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 AP1ARQ63HQ0 302 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 SLC8B1Q6J4K2 584 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 TUBA3EQ6PEY2 450 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 HSDL2Q6YN16 418 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 GPR142Q7Z601 462 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 FJX1Q86VR8 437 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 KRTAP1-3Q8IUG1 177 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 PGBD5Q8N414 524 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 OR2T12Q8NG77 320 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 OR5M9Q8NGP3 310 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 OR1L6Q8NGR2 347 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 OR13C3Q8NGS6 347 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 LRRC20Q8TCA0 184 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 CERS2Q96G23 380 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 C17orf77Q96MU5 243 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 TRNT1Q96Q11 434 aaKnown RBP5.35□□□□□ -1.55
BRCA1-224ENST00000497488 IL4I1Q96RQ9 567 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 TUBGCP2Q9BSJ2 902 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 ILKAPQ9H0C8 392 aaPredicted RBP5.35□□□□□ -1.55
BRCA1-224ENST00000497488 FAM49AQ9H0Q0 323 aaPredicted RBP5.35□□□□□ -1.55
BRCA1-224ENST00000497488 RHBGQ9H310 441 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 CPVLQ9H3G5 476 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 SMYD3Q9H7B4 428 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 MAN2C1Q9NTJ4 1040 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 STOX2Q9P2F5 926 aaPredicted RBP5.35□□□□□ -1.55
BRCA1-224ENST00000497488 CTSFQ9UBX1 484 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 SIX4Q9UIU6 781 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 PRPF19Q9UMS4 504 aaKnown RBP5.35□□□□□ -1.55
BRCA1-224ENST00000497488 STARD10Q9Y365 291 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 MAD1L1Q9Y6D9 718 aa5.35□□□□□ -1.55
BRCA1-224ENST00000497488 LTN1O94822 1766 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 LRRC37A3O60309 1634 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 FAM74A7A6NL05 159 aa5.34□□□□□ -1.55
BRCA1-224ENST00000497488 PRRG2O14669 202 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms