RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 GVQW1Q8N7I0 195 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 LRTM2Q8N967 370 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 OR8J1Q8NGP2 316 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 RPLP0P6Q8NHW5 317 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 NANPQ8TBE9 248 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 TRMT10AQ8TBZ6 339 aaKnown RBP2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 SLC2A14Q8TDB8 520 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 TSEN15Q8WW01 171 aaKnown RBP2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 ZNRF4Q8WWF5 429 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 DNAJB3Q8WWF6 145 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 PIGCQ92535 297 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 PHYHIPQ92561 330 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 SMARCD2Q92925 531 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 SLC35C1Q96A29 364 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 C11orf24Q96F05 449 aaPredicted RBP2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 C18orf12Q96KH6 178 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 C3orf30Q96M34 536 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 MBOAT7Q96N66 472 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 UHRF2Q96PU4 802 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 QTRT1Q9BXR0 403 aaKnown RBP2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 ERVK-6Q9BXR3 956 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 PARD6BQ9BYG5 372 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 RIOX1Q9H6W3 641 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 EGLN3Q9H6Z9 239 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 FANCEQ9HB96 536 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 PALMDQ9NP74 551 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 A4GALTQ9NPC4 353 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 YAE1D1Q9NRH1 226 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 TBC1D13Q9NVG8 400 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 RNF14Q9UBS8 474 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 SATB2Q9UPW6 733 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 OR10H1Q9Y4A9 318 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 ATG4BQ9Y4P1 393 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 DMRT1Q9Y5R6 373 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 ETV7Q9Y603 341 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 AP4B1Q9Y6B7 739 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 NAV1Q8NEY1 1877 aa2.14□□□□□ -2.07
CKS1BP2-201ENST00000497342 EVPLQ92817 2033 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 GREB1LQ9C091 1923 aaPredicted RBP2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 PLXND1Q9Y4D7 1925 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 LOC100653049A0A140TA62 436 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 A0A1W2PNU3 283 aaPredicted RBP2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 GSAPA4D1B5 854 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 ASPDHA6ND91 283 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 ANKRD61A6NGH8 418 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 LRRIQ4A6NIV6 560 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 YJEFN3A6XGL0 299 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 A8MUI8 341 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 NPIPA2E9PIF3 369 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 NPIPB8E9PQR5 432 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 LMO7DNF2Z398 122 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 ARPC3O15145 178 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 SLC22A2O15244 555 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 ALOX15BO15296 676 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 RNF113AO15541 343 aaKnown RBP2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 MLNRO43193 412 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 KIF5CO60282 957 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 KCNJ13O60928 360 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 SAP30O75446 220 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 KRT34O76011 436 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 LY6G6DO95868 133 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 KRT14P02533 472 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 MT-ND2P03891 347 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 FAM157CP0CG43 387 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 IGHV4-38-2P0DP08 117 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 COX6B1P14854 86 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 DAOP14920 347 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 AMD1P17707 334 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 HNF1AP20823 631 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 TBXA2RP21731 343 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 GPX3P22352 226 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 GJB2P29033 226 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 CASQ1P31415 396 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 UGT1A5P35504 534 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 CETN2P41208 172 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 NPY2RP49146 381 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 FHITP49789 147 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 PDLIM4P50479 330 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 SGSHP51688 502 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 IST1P53990 364 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 PRRX1P54821 245 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 NAPAP54920 295 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 GEMP55040 296 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 MYL7Q01449 175 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 POU3F1Q03052 451 aaPredicted RBP2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 DMPKQ09013 629 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 ENPP2Q13822 863 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 ELAVL3Q14576 367 aaKnown RBP2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 RBMS2Q15434 407 aaKnown RBP2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 EXT1Q16394 746 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 CARTPTQ16568 116 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 TPD52L1Q16890 204 aaPredicted RBP2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 HSDL1Q3SXM5 330 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 Q4G0T1 1027 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 ASPRV1Q53RT3 343 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 ZNF542PQ5EBM4 170 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 PPM1LQ5SGD2 360 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 LDLRAP1Q5SW96 308 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 ATF7IP2Q5U623 682 aa2.13□□□□□ -2.07
CKS1BP2-201ENST00000497342 LIPKQ5VXJ0 399 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms