RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 TGIF1Q15583 401 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 LRRC23Q53EV4 343 aaPredicted RBP3.08□□□□□ -1.92
SMC4-225ENST00000497203 ATAD3CQ5T2N8 411 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 ZNF57Q68EA5 555 aaPredicted RBP3.08□□□□□ -1.92
SMC4-225ENST00000497203 SYT10Q6XYQ8 523 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 APTXQ7Z2E3 356 aaKnown RBP3.08□□□□□ -1.92
SMC4-225ENST00000497203 CADM2Q8N3J6 435 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 CLDN19Q8N6F1 224 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 C15orf54Q8N8G6 183 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 SYT14Q8NB59 555 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 FBXO30Q8TB52 745 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 CNIH3Q8TBE1 160 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 AENQ8WTP8 325 aaKnown RBP3.08□□□□□ -1.92
SMC4-225ENST00000497203 CCT8L2Q96SF2 557 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 ERP44Q9BS26 406 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 RHOJQ9H4E5 214 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 PNO1Q9NRX1 252 aaKnown RBP3.08□□□□□ -1.92
SMC4-225ENST00000497203 C6orf203Q9P0P8 240 aaPredicted RBP3.08□□□□□ -1.92
SMC4-225ENST00000497203 RNF14Q9UBS8 474 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 SLC2A6Q9UGQ3 507 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 SAMD4AQ9UPU9 718 aaKnown RBP3.08□□□□□ -1.92
SMC4-225ENST00000497203 L3MBTL1Q9Y468 752 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 ATP10DQ9P241 1426 aa3.08□□□□□ -1.92
SMC4-225ENST00000497203 SAGE2PA6NJ88 616 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 B4DXG7 233 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 GPR89AB7ZAQ6 455 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 K7EQM0 130 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 B3GAT3O94766 335 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 DUSP14O95147 198 aaKnown RBP3.07□□□□□ -1.92
SMC4-225ENST00000497203 H2BFMP0C1H6 154 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 GPR89BP0CG08 455 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 PGCP20142 388 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 TPSB2P20231 275 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 IGHV1-2P23083 117 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 CA8P35219 290 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 RGS4P49798 205 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 EFNA3P52797 238 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 AP3M2P53677 418 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 KRTAP10-3P60369 221 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 RPL32P62910 135 aaKnown RBP3.07□□□□□ -1.92
SMC4-225ENST00000497203 RPL8P62917 257 aaKnown RBP3.07□□□□□ -1.92
SMC4-225ENST00000497203 VLDLRP98155 873 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 OTUD4Q01804 1114 aaKnown RBP3.07□□□□□ -1.92
SMC4-225ENST00000497203 SPIBQ01892 262 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 ASAH1Q13510 395 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 TPSAB1Q15661 275 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 NDUFA9Q16795 377 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 QRICH1Q2TAL8 776 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 GLYR1Q49A26 553 aaPredicted RBP3.07□□□□□ -1.92
SMC4-225ENST00000497203 MARC1Q5VT66 337 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 PVRIGQ6DKI7 326 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 ACSM5Q6NUN0 579 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 FAHD2BQ6P2I3 314 aaPredicted RBP3.07□□□□□ -1.92
SMC4-225ENST00000497203 P2RY8Q86VZ1 359 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 SERPINA9Q86WD7 417 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 NAXDQ8IW45 347 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 C9orf40Q8IXQ3 194 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 OR9A4Q8NGU2 314 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 CCDC26Q8TAB7 109 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 TRMT10AQ8TBZ6 339 aaKnown RBP3.07□□□□□ -1.92
SMC4-225ENST00000497203 ADAMTS16Q8TE57 1224 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 TRUB1Q8WWH5 349 aaKnown RBP3.07□□□□□ -1.92
SMC4-225ENST00000497203 CTNNBL1Q8WYA6 563 aaPredicted RBP3.07□□□□□ -1.92
SMC4-225ENST00000497203 OSTF1Q92882 214 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 FAHD2AQ96GK7 314 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 C7orf34Q96L11 122 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 TTC25Q96NG3 672 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 SIGLEC12Q96PQ1 595 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 OR5B2Q96R09 309 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 ZNF607Q96SK3 696 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 DPH7Q9BTV6 452 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 CRNKL1Q9BZJ0 848 aaKnown RBP3.07□□□□□ -1.92
SMC4-225ENST00000497203 NT5C3AQ9H0P0 336 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 PPDPFQ9H3Y8 114 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 GNG12Q9UBI6 72 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 CHRNA9Q9UGM1 479 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 NAALAD2Q9Y3Q0 740 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 OARD1Q9Y530 152 aa3.07□□□□□ -1.92
SMC4-225ENST00000497203 C15orf38-AP3S2A0A0A6YYH1 394 aa3.06□□□□□ -1.92
SMC4-225ENST00000497203 NPIPA7E9PJI5 369 aa3.06□□□□□ -1.92
SMC4-225ENST00000497203 NEBLO76041 1014 aa3.06□□□□□ -1.92
SMC4-225ENST00000497203 TM7SF2O76062 418 aa3.06□□□□□ -1.92
SMC4-225ENST00000497203 NOL4O94818 638 aa3.06□□□□□ -1.92
SMC4-225ENST00000497203 SLC35E2P0CK97 266 aa3.06□□□□□ -1.92
SMC4-225ENST00000497203 NPIPA8P0DM63 369 aa3.06□□□□□ -1.92
SMC4-225ENST00000497203 SERPINA2P20848 420 aa3.06□□□□□ -1.92
SMC4-225ENST00000497203 PTBP1P26599 531 aaKnown RBP eCLIP3.06□□□□□ -1.92
SMC4-225ENST00000497203 BDKRB1P46663 353 aa3.06□□□□□ -1.92
SMC4-225ENST00000497203 SLC25A30Q5SVS4 291 aa3.06□□□□□ -1.92
SMC4-225ENST00000497203 SPATA46Q5T0L3 261 aa3.06□□□□□ -1.92
SMC4-225ENST00000497203 SLC22A10Q63ZE4 541 aa3.06□□□□□ -1.92
SMC4-225ENST00000497203 TMEM225Q6GV28 225 aa3.06□□□□□ -1.92
SMC4-225ENST00000497203 SPINK14Q6IE38 97 aa3.06□□□□□ -1.92
SMC4-225ENST00000497203 FAM43BQ6ZT52 329 aaPredicted RBP3.06□□□□□ -1.92
SMC4-225ENST00000497203 ACOT1Q86TX2 421 aa3.06□□□□□ -1.92
SMC4-225ENST00000497203 VASH2Q86V25 355 aa3.06□□□□□ -1.92
SMC4-225ENST00000497203 TBC1D21Q8IYX1 336 aa3.06□□□□□ -1.92
SMC4-225ENST00000497203 OR10A7Q8NGE5 316 aa3.06□□□□□ -1.92
SMC4-225ENST00000497203 M1APQ8TC57 530 aa3.06□□□□□ -1.92
SMC4-225ENST00000497203 RANBP9Q96S59 729 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms