RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 CD27P26842 260 aa12.09□□□□□ -0.47
GARNL3-220ENST00000496711 PLAURQ03405 335 aa12.09□□□□□ -0.47
GARNL3-220ENST00000496711 TDGQ13569 410 aa12.09□□□□□ -0.47
GARNL3-220ENST00000496711 ZNF613Q6PF04 617 aa12.09□□□□□ -0.47
GARNL3-220ENST00000496711 HSDL2Q6YN16 418 aa12.09□□□□□ -0.47
GARNL3-220ENST00000496711 SHFQ7M4L6 423 aa12.09□□□□□ -0.47
GARNL3-220ENST00000496711 ZAR1Q86SH2 424 aa12.09□□□□□ -0.47
GARNL3-220ENST00000496711 LAPTM4BQ86VI4 370 aa12.09□□□□□ -0.47
GARNL3-220ENST00000496711 LYSMD2Q8IV50 215 aa12.09□□□□□ -0.47
GARNL3-220ENST00000496711 PFN4Q8NHR9 129 aa12.09□□□□□ -0.47
GARNL3-220ENST00000496711 RNF217Q8TC41 542 aa12.09□□□□□ -0.47
GARNL3-220ENST00000496711 MAP3K3Q99759 626 aa12.09□□□□□ -0.47
GARNL3-220ENST00000496711 LMAN1LQ9HAT1 526 aa12.09□□□□□ -0.47
GARNL3-220ENST00000496711 SIDT1Q9NXL6 827 aaKnown RBP12.09□□□□□ -0.47
GARNL3-220ENST00000496711 IL20RAQ9UHF4 553 aa12.09□□□□□ -0.47
GARNL3-220ENST00000496711 DOLKQ9UPQ8 538 aa12.09□□□□□ -0.47
GARNL3-220ENST00000496711 TMEM5Q9Y2B1 443 aa12.09□□□□□ -0.47
GARNL3-220ENST00000496711 TGFBR3LH3BV60 316 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 FOXS1O43638 330 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 ZGLP1P0C6A0 271 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 LIMS3P0CW19 117 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 LIMS4P0CW20 117 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 MAKP20794 623 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 S1PR1P21453 382 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 DRD5P21918 477 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 CD38P28907 300 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 HTR1FP30939 366 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 RPS19P39019 145 aaKnown RBP12.08□□□□□ -0.48
GARNL3-220ENST00000496711 SLC1A3P43003 542 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 RFX3P48380 749 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 IGLV3-21P80748 117 aaPredicted RBP12.08□□□□□ -0.48
GARNL3-220ENST00000496711 PSG6Q00889 435 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 STX4Q12846 297 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 DNASE1L3Q13609 305 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 AMZ1Q400G9 498 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 SPANXN2Q5MJ10 180 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 PDZK1Q5T2W1 519 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 RPL13AP3Q6NVV1 102 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 SLC22A16Q86VW1 577 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 ZNF595Q8IYB9 648 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 ZNF687Q8N1G0 1237 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 ZNF614Q8N883 585 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 LMX1AQ8TE12 382 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 TM9SF4Q92544 642 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 UFD1Q92890 307 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 RIT1Q92963 219 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 PEX11GQ96HA9 241 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 CEP19Q96LK0 163 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 HS6ST2Q96MM7 605 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 CD180Q99467 661 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 KCNS3Q9BQ31 491 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.08□□□□□ -0.48
GARNL3-220ENST00000496711 UBQLN3Q9H347 655 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 TMEM27Q9HBJ8 222 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 C20orf141Q9NUB4 165 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 TXNL4BQ9NX01 149 aaKnown RBP12.08□□□□□ -0.48
GARNL3-220ENST00000496711 CA14Q9ULX7 337 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 UGT2A1Q9Y4X1 527 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 CSNK1G3Q9Y6M4 447 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 A0A1W2PR77 199 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 HRO43593 1189 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 CTNSO60931 367 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 NSA2O95478 260 aaKnown RBP12.08□□□□□ -0.48
GARNL3-220ENST00000496711 SLC2A10O95528 541 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 MLLT3P42568 568 aaPredicted RBP12.08□□□□□ -0.48
GARNL3-220ENST00000496711 EMDP50402 254 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 RORCP51449 518 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 FXYD6P3P58550 94 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 TPBGQ13641 420 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 DSG2Q14126 1118 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 GAS6Q14393 721 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 LRIT3Q3SXY7 679 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 CXXC5Q7LFL8 322 aaKnown RBP12.08□□□□□ -0.48
GARNL3-220ENST00000496711 CCDC190Q86UF4 302 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 GRAMD2AQ8IUY3 354 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 GID4Q8IVV7 300 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 CDK20Q8IZL9 346 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 BBS1Q8NFJ9 593 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 OR6C4Q8NGE1 309 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 GATAD2BQ8WXI9 593 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 RBM18Q96H35 190 aaKnown RBP12.08□□□□□ -0.48
GARNL3-220ENST00000496711 SLC38A3Q99624 504 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 ARHGAP9Q9BRR9 750 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 TTYH1Q9H313 450 aaPredicted RBP12.08□□□□□ -0.48
GARNL3-220ENST00000496711 HINT3Q9NQE9 182 aaKnown RBP12.08□□□□□ -0.48
GARNL3-220ENST00000496711 POLE4Q9NR33 117 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 PRTFDC1Q9NRG1 225 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 QPCTLQ9NXS2 382 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 H2AFY2Q9P0M6 372 aaPredicted RBP12.08□□□□□ -0.48
GARNL3-220ENST00000496711 CBLCQ9ULV8 474 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 EXOGQ9Y2C4 368 aaKnown RBP12.08□□□□□ -0.48
GARNL3-220ENST00000496711 MED31Q9Y3C7 131 aa12.08□□□□□ -0.48
GARNL3-220ENST00000496711 A0A0B4J2E0 115 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 A0A1B0GX12 115 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 BOLA2-SMG1P6H3BVE0 249 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 BHLHE40O14503 412 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 CHP2O43745 196 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 PRAMEF2O60811 474 aa12.07□□□□□ -0.48
GARNL3-220ENST00000496711 CDC123O75794 336 aaPredicted RBP12.07□□□□□ -0.48
GARNL3-220ENST00000496711 IL1AP01583 271 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms