RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, human

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRNKL1-205	ENST00000496549	CEBPG	P53567	150 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	DGCR2	P98153	550 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	FABP5	Q01469	135 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	TLE4	Q04727	773 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	ZNF660	Q6AZW8	331 aa	Predicted RBP	7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	SLC27A1	Q6PCB7	646 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	TPGS1	Q6ZTW0	290 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	PARG	Q86W56	976 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	SLC30A8	Q8IWU4	369 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	POGLUT1	Q8NBL1	392 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	SEMA6D	Q8NFY4	1073 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	OR5T1	Q8NG75	326 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	OR4E2	Q8NGC2	313 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	SIGLEC11	Q96RL6	698 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	SLC25A51	Q9H1U9	297 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	IKZF5	Q9H5V7	419 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	FN3KRP	Q9HA64	309 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	UQCC1	Q9NVA1	299 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	DHCR7	Q9UBM7	475 aa	Known RBP	7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	FBXO10	Q9UK96	956 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	AKT3	Q9Y243	479 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	SNX10	Q9Y5X0	201 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	ENPP4	Q9Y6X5	453 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	LAMB2	P55268	1798 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	DOT1L	Q8TEK3	1739 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	GXYLT2	A0PJZ3	443 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549		M0QZK8	103 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	BCL2L11	O43521	198 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	GGCT	O75223	188 aa	Known RBP	7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	TSPAN15	O95858	294 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	SOD1	P00441	154 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	FGF1	P05230	155 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	MMP10	P09238	476 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	BMP7	P18075	431 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	TBXA2R	P21731	343 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	DGKA	P23743	735 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	TRHR	P34981	398 aa	Predicted RBP	7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	ACTR1B	P42025	376 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	NOV	P48745	357 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	PPM1F	P49593	454 aa	Predicted RBP	7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	GATM	P50440	423 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	ODF4	Q2M2E3	257 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	SOWAHA	Q2M3V2	549 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	TANGO2	Q6ICL3	276 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	LINGO4	Q6UY18	593 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549		Q6ZSR9	355 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	EID2	Q8N6I1	236 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	OR10H4	Q8NGA5	316 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	OR52I1	Q8NGK6	324 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	OR9A2	Q8NGT5	310 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	SLC7A13	Q8TCU3	470 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	HASPIN	Q8TF76	798 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	P2RX7	Q99572	595 aa	Known RBP	7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	ZNF649	Q9BS31	505 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	POTEKP	Q9BYX7	375 aa		7.7	□□□□□ -1.18
CRNKL1-205	ENST00000496549	BTAF1	O14981	1849 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	ACOD1	A6NK06	481 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	GABRR3	A8MPY1	467 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	ACOT7	O00154	380 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	SMAD9	O15198	467 aa	Known RBP	7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	PCDH7	O60245	1069 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	HPX	P02790	462 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	MT-ND5	P03915	603 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	ICAM1	P05362	532 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	ACP2	P11117	423 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	NPBWR1	P48145	328 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	WNT7B	P56706	349 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	RAB1A	P62820	205 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	CDK6	Q00534	326 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	PRKCZ	Q05513	592 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	AMHR2	Q16671	573 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	ZNF791	Q3KP31	576 aa	Predicted RBP	7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	OTUD1	Q5VV17	481 aa	Predicted RBP	7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	KCTD11	Q693B1	232 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	ABLIM2	Q6H8Q1	611 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	SLC22A25	Q6T423	547 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	SEZ6L2	Q6UXD5	910 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	TTLL10	Q6ZVT0	673 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	PEG10	Q86TG7	708 aa	Known RBP	7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	RGL4	Q8IZJ4	473 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	SLC44A3	Q8N4M1	653 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	C1orf127	Q8N9H9	656 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	OR52L1	Q8NGH7	329 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	MCOLN1	Q9GZU1	580 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	TCEAL2	Q9H3H9	227 aa	Predicted RBP	7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	MMP26	Q9NRE1	261 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	UXT	Q9UBK9	157 aa	Predicted RBP	7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	SYNDIG1L	A6NDD5	238 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	TMEM210	A6NLX4	147 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	NPIPA7	E9PJI5	369 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	NPIPB9	F8W1W9	429 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	SEMA7A	O75326	666 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	IL5	P05113	134 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	EIF4E	P06730	217 aa	Known RBP	7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	PRR35	P0CG20	571 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	NPIPA8	P0DM63	369 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	TNFRSF1B	P20333	461 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	CD34	P28906	385 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	GDI1	P31150	447 aa		7.69	□□□□□ -1.18
CRNKL1-205	ENST00000496549	CAP2	P40123	477 aa		7.69	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms