RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 RNF165Q6ZSG1 346 aa19.76■□□□□ 0.75
HDDC3-203ENST00000494993 Q6ZSR9 355 aa19.76■□□□□ 0.75
HDDC3-203ENST00000494993 PLEKHM3Q6ZWE6 761 aa19.76■□□□□ 0.75
HDDC3-203ENST00000494993 SLC16A11Q8NCK7 471 aa19.76■□□□□ 0.75
HDDC3-203ENST00000494993 OR2V1Q8NHB1 315 aa19.76■□□□□ 0.75
HDDC3-203ENST00000494993 RNF145Q96MT1 663 aa19.76■□□□□ 0.75
HDDC3-203ENST00000494993 RHOXF2Q9BQY4 288 aa19.76■□□□□ 0.75
HDDC3-203ENST00000494993 FANCFQ9NPI8 374 aa19.76■□□□□ 0.75
HDDC3-203ENST00000494993 GLRX2Q9NS18 164 aa19.76■□□□□ 0.75
HDDC3-203ENST00000494993 ACSS1Q9NUB1 689 aaPredicted RBP19.76■□□□□ 0.75
HDDC3-203ENST00000494993 MED17Q9NVC6 651 aa19.76■□□□□ 0.75
HDDC3-203ENST00000494993 SH3BP4Q9P0V3 963 aa19.76■□□□□ 0.75
HDDC3-203ENST00000494993 TRIM64A6NGJ6 449 aa19.75■□□□□ 0.75
HDDC3-203ENST00000494993 TRIM64BA6NI03 449 aa19.75■□□□□ 0.75
HDDC3-203ENST00000494993 TNFSF11O14788 317 aa19.75■□□□□ 0.75
HDDC3-203ENST00000494993 AZIN1O14977 448 aa19.75■□□□□ 0.75
HDDC3-203ENST00000494993 SMAD7O15105 426 aaKnown RBP19.75■□□□□ 0.75
HDDC3-203ENST00000494993 LCN1P31025 176 aa19.75■□□□□ 0.75
HDDC3-203ENST00000494993 RPL38P63173 70 aaKnown RBP19.75■□□□□ 0.75
HDDC3-203ENST00000494993 CPTPQ5TA50 214 aa19.75■□□□□ 0.75
HDDC3-203ENST00000494993 ZNF704Q6ZNC4 412 aaPredicted RBP19.75■□□□□ 0.75
HDDC3-203ENST00000494993 ESPNLQ6ZVH7 1005 aa19.75■□□□□ 0.75
HDDC3-203ENST00000494993 MISPQ8IVT2 679 aa19.75■□□□□ 0.75
HDDC3-203ENST00000494993 GSPT2Q8IYD1 628 aaKnown RBP19.75■□□□□ 0.75
HDDC3-203ENST00000494993 CLHC1Q8NHS4 586 aa19.75■□□□□ 0.75
HDDC3-203ENST00000494993 NUDT8Q8WV74 236 aa19.75■□□□□ 0.75
HDDC3-203ENST00000494993 IGFBPL1Q8WX77 278 aa19.75■□□□□ 0.75
HDDC3-203ENST00000494993 SH3YL1Q96HL8 342 aaPredicted RBP19.75■□□□□ 0.75
HDDC3-203ENST00000494993 TUBB1Q9H4B7 451 aa19.75■□□□□ 0.75
HDDC3-203ENST00000494993 UBQLN4Q9NRR5 601 aa19.75■□□□□ 0.75
HDDC3-203ENST00000494993 FBXO34Q9NWN3 711 aa19.75■□□□□ 0.75
HDDC3-203ENST00000494993 BAIAP2L1Q9UHR4 511 aa19.75■□□□□ 0.75
HDDC3-203ENST00000494993 FIS1Q9Y3D6 152 aa19.75■□□□□ 0.75
HDDC3-203ENST00000494993 A0A0J9YW62 118 aa19.74■□□□□ 0.75
HDDC3-203ENST00000494993 COPEO14579 308 aa19.74■□□□□ 0.75
HDDC3-203ENST00000494993 SHBGP04278 402 aa19.74■□□□□ 0.75
HDDC3-203ENST00000494993 ALOX5P09917 674 aa19.74■□□□□ 0.75
HDDC3-203ENST00000494993 HPGDP15428 266 aa19.74■□□□□ 0.75
HDDC3-203ENST00000494993 ME2P23368 584 aa19.74■□□□□ 0.75
HDDC3-203ENST00000494993 NR1H2P55055 460 aa19.74■□□□□ 0.75
HDDC3-203ENST00000494993 RFTN2Q52LD8 501 aaPredicted RBP19.74■□□□□ 0.75
HDDC3-203ENST00000494993 HBMQ6B0K9 141 aa19.74■□□□□ 0.75
HDDC3-203ENST00000494993 ZCCHC12Q6PEW1 402 aa19.74■□□□□ 0.75
HDDC3-203ENST00000494993 BEND4Q6ZU67 534 aa19.74■□□□□ 0.75
HDDC3-203ENST00000494993 COX18Q8N8Q8 333 aa19.74■□□□□ 0.75
HDDC3-203ENST00000494993 POC1BQ8TC44 478 aa19.74■□□□□ 0.75
HDDC3-203ENST00000494993 C16orf58Q96GQ5 468 aa19.74■□□□□ 0.75
HDDC3-203ENST00000494993 KLHDC3Q9BQ90 382 aa19.74■□□□□ 0.75
HDDC3-203ENST00000494993 TMEM185BQ9H7F4 350 aa19.74■□□□□ 0.75
HDDC3-203ENST00000494993 TMED5Q9Y3A6 229 aa19.74■□□□□ 0.75
HDDC3-203ENST00000494993 A0A1W2PQD3 144 aa19.73■□□□□ 0.75
HDDC3-203ENST00000494993 KIF2AO00139 706 aaPredicted RBP19.73■□□□□ 0.75
HDDC3-203ENST00000494993 SCDO00767 359 aa19.73■□□□□ 0.75
HDDC3-203ENST00000494993 LSM1O15116 133 aaKnown RBP19.73■□□□□ 0.75
HDDC3-203ENST00000494993 TUBBP07437 444 aa19.73■□□□□ 0.75
HDDC3-203ENST00000494993 SERPINB4P48594 390 aa19.73■□□□□ 0.75
HDDC3-203ENST00000494993 EXOSC6Q5RKV6 272 aaKnown RBP19.73■□□□□ 0.75
HDDC3-203ENST00000494993 PDSS1Q5T2R2 415 aa19.73■□□□□ 0.75
HDDC3-203ENST00000494993 CCNJQ5T5M9 372 aa19.73■□□□□ 0.75
HDDC3-203ENST00000494993 STK32CQ86UX6 486 aa19.73■□□□□ 0.75
HDDC3-203ENST00000494993 TDRPQ86YL5 185 aa19.73■□□□□ 0.75
HDDC3-203ENST00000494993 C10orf107Q8IVU9 208 aa19.73■□□□□ 0.75
HDDC3-203ENST00000494993 B4GALNT2Q8NHY0 566 aa19.73■□□□□ 0.75
HDDC3-203ENST00000494993 KIF18AQ8NI77 898 aa19.73■□□□□ 0.75
HDDC3-203ENST00000494993 MTERF3Q96E29 417 aa19.73■□□□□ 0.75
HDDC3-203ENST00000494993 OTUB1Q96FW1 271 aaPredicted RBP19.73■□□□□ 0.75
HDDC3-203ENST00000494993 ACTR6Q9GZN1 396 aa19.73■□□□□ 0.75
HDDC3-203ENST00000494993 OR10A4Q9H209 315 aa19.73■□□□□ 0.75
HDDC3-203ENST00000494993 MID2Q9UJV3 735 aa19.73■□□□□ 0.75
HDDC3-203ENST00000494993 HSPA4LO95757 839 aa19.72■□□□□ 0.75
HDDC3-203ENST00000494993 CHEK2O96017 543 aa19.72■□□□□ 0.75
HDDC3-203ENST00000494993 PLAUP00749 431 aa19.72■□□□□ 0.75
HDDC3-203ENST00000494993 LINC00032P0C843 101 aa19.72■□□□□ 0.75
HDDC3-203ENST00000494993 PAX1P15863 534 aa19.72■□□□□ 0.75
HDDC3-203ENST00000494993 EFNA1P20827 205 aaPredicted RBP19.72■□□□□ 0.75
HDDC3-203ENST00000494993 AGTR1P30556 359 aa19.72■□□□□ 0.75
HDDC3-203ENST00000494993 ASMTP46597 345 aa19.72■□□□□ 0.75
HDDC3-203ENST00000494993 PRIM2P49643 509 aa19.72■□□□□ 0.75
HDDC3-203ENST00000494993 PCLAFQ15004 111 aa19.72■□□□□ 0.75
HDDC3-203ENST00000494993 CD226Q15762 336 aa19.72■□□□□ 0.75
HDDC3-203ENST00000494993 KANK2Q63ZY3 851 aa19.72■□□□□ 0.75
HDDC3-203ENST00000494993 TRABD2AQ86V40 505 aa19.72■□□□□ 0.75
HDDC3-203ENST00000494993 WFDC8Q8IUA0 241 aa19.72■□□□□ 0.75
HDDC3-203ENST00000494993 TMEM171Q8WVE6 324 aa19.72■□□□□ 0.75
HDDC3-203ENST00000494993 JADE3Q92613 823 aa19.72■□□□□ 0.75
HDDC3-203ENST00000494993 OSTF1Q92882 214 aa19.72■□□□□ 0.75
HDDC3-203ENST00000494993 FAM120BQ96EK7 910 aaKnown RBP19.72■□□□□ 0.75
HDDC3-203ENST00000494993 PLPPR2Q96GM1 343 aa19.72■□□□□ 0.75
HDDC3-203ENST00000494993 KLHL15Q96M94 604 aa19.72■□□□□ 0.75
HDDC3-203ENST00000494993 TRMOQ9BU70 441 aa19.72■□□□□ 0.75
HDDC3-203ENST00000494993 GATA5Q9BWX5 397 aaPredicted RBP19.72■□□□□ 0.75
HDDC3-203ENST00000494993 C12orf49Q9H741 205 aa19.72■□□□□ 0.75
HDDC3-203ENST00000494993 PPCSQ9HAB8 311 aa19.72■□□□□ 0.75
HDDC3-203ENST00000494993 SIRT3Q9NTG7 399 aaPredicted RBP19.72■□□□□ 0.75
HDDC3-203ENST00000494993 GPR52Q9Y2T5 361 aa19.72■□□□□ 0.75
HDDC3-203ENST00000494993 DNAJC15Q9Y5T4 150 aa19.72■□□□□ 0.75
HDDC3-203ENST00000494993 SMIM23A6NLE4 172 aa19.71■□□□□ 0.75
HDDC3-203ENST00000494993 CNOT4O95628 575 aaKnown RBP19.71■□□□□ 0.75
HDDC3-203ENST00000494993 LINGO3P0C6S8 592 aa19.71■□□□□ 0.75
HDDC3-203ENST00000494993 KRT4P19013 534 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms