RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	SLC47A1	Q96FL8	570 aa		12.42	□□□□□ -0.42
APTX-231	ENST00000494973	DUS3L	Q96G46	650 aa	Known RBP	12.42	□□□□□ -0.42
APTX-231	ENST00000494973	SH2D2A	Q9NP31	389 aa		12.42	□□□□□ -0.42
APTX-231	ENST00000494973	TUBD1	Q9UJT1	453 aa		12.42	□□□□□ -0.42
APTX-231	ENST00000494973	PCDHGB6	Q9Y5F9	930 aa		12.42	□□□□□ -0.42
APTX-231	ENST00000494973	WIF1	Q9Y5W5	379 aa		12.42	□□□□□ -0.42
APTX-231	ENST00000494973	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	12.42	□□□□□ -0.42
APTX-231	ENST00000494973	WDFY3	Q8IZQ1	3526 aa		12.42	□□□□□ -0.42
APTX-231	ENST00000494973	IGF2R	P11717	2491 aa		12.42	□□□□□ -0.42
APTX-231	ENST00000494973	NPIPA5	A0A0B4J1W7	369 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	FAM47E-STBD1	D6RA91	191 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	NPIPA7	E9PJI5	369 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	AP3D1	O14617	1153 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	ZNF354A	O60765	605 aa	Predicted RBP	12.41	□□□□□ -0.42
APTX-231	ENST00000494973	FMO6P	O60774	539 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	SLC25A12	O75746	678 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	PRKD3	O94806	890 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	ANGPTL1	O95841	491 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	WDPCP	O95876	746 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	LGI1	O95970	557 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	NPIPA8	P0DM63	369 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	SLC7A1	P30825	629 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	CASP3	P42574	277 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	CRYBA2	P53672	197 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	RGS8	P57771	180 aa	Predicted RBP	12.41	□□□□□ -0.42
APTX-231	ENST00000494973	GK3P	Q14409	553 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	OR1C1	Q15619	314 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	IGFL3	Q6UXB1	125 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	PACS2	Q86VP3	889 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	VRK2	Q86Y07	508 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	ZADH2	Q8N4Q0	377 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	FAM98A	Q8NCA5	519 aa	Known RBP	12.41	□□□□□ -0.42
APTX-231	ENST00000494973	PSD4	Q8NDX1	1056 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	FAM71C	Q8NEG0	241 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	OR5M3	Q8NGP4	307 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	PHOSPHO1	Q8TCT1	267 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	GRHL3	Q8TE85	626 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	NODAL	Q96S42	347 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	ZNF347	Q96SE7	839 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	ARHGDIG	Q99819	225 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	ANGPTL4	Q9BY76	406 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	LAT2	Q9GZY6	243 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	QRSL1	Q9H0R6	528 aa	Known RBP	12.41	□□□□□ -0.42
APTX-231	ENST00000494973	ADNP	Q9H2P0	1102 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	PPP4R1L	Q9P1A2	415 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	MED13	Q9UHV7	2174 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	CNOT11	Q9UKZ1	510 aa	Known RBP	12.41	□□□□□ -0.42
APTX-231	ENST00000494973	BOK	Q9UMX3	212 aa	Predicted RBP	12.41	□□□□□ -0.42
APTX-231	ENST00000494973	AURKC	Q9UQB9	309 aa		12.41	□□□□□ -0.42
APTX-231	ENST00000494973	RRP15	Q9Y3B9	282 aa	Known RBP	12.41	□□□□□ -0.42
APTX-231	ENST00000494973	FAM32A	Q9Y421	112 aa	Known RBP	12.41	□□□□□ -0.42
APTX-231	ENST00000494973	IGLV3-32	A0A0A0MS00	114 aa		12.4	□□□□□ -0.42
APTX-231	ENST00000494973	TRAV17	A0A0B4J275	112 aa		12.4	□□□□□ -0.42
APTX-231	ENST00000494973	ANKRD65	E5RJM6	399 aa		12.4	□□□□□ -0.42
APTX-231	ENST00000494973	KLRC4-KLRK1	H3BQV0	150 aa		12.4	□□□□□ -0.42
APTX-231	ENST00000494973	FAAH	O00519	579 aa		12.4	□□□□□ -0.42
APTX-231	ENST00000494973	SCO2	O43819	266 aa		12.4	□□□□□ -0.42
APTX-231	ENST00000494973	MAN1A2	O60476	641 aa		12.4	□□□□□ -0.42
APTX-231	ENST00000494973	FABP3	P05413	133 aa		12.4	□□□□□ -0.42
APTX-231	ENST00000494973	ITPKB	P27987	946 aa		12.4	□□□□□ -0.42
APTX-231	ENST00000494973	CD96	P40200	585 aa		12.4	□□□□□ -0.42
APTX-231	ENST00000494973	MASP1	P48740	699 aa		12.4	□□□□□ -0.42
APTX-231	ENST00000494973	COPZ1	P61923	177 aa		12.4	□□□□□ -0.42
APTX-231	ENST00000494973	CCNI	Q14094	377 aa		12.4	□□□□□ -0.42
APTX-231	ENST00000494973	GANAB	Q14697	944 aa	Known RBP	12.4	□□□□□ -0.42
APTX-231	ENST00000494973	MAPK14	Q16539	360 aa		12.4	□□□□□ -0.42
APTX-231	ENST00000494973	NRF1	Q16656	503 aa		12.4	□□□□□ -0.42
APTX-231	ENST00000494973	DUSP7	Q16829	419 aa		12.4	□□□□□ -0.42
APTX-231	ENST00000494973	FNDC7	Q5VTL7	733 aa		12.4	□□□□□ -0.42
APTX-231	ENST00000494973	ADGRG5	Q8IZF4	528 aa		12.4	□□□□□ -0.42
APTX-231	ENST00000494973	TMCO5A	Q8N6Q1	288 aa		12.4	□□□□□ -0.42
APTX-231	ENST00000494973	GPR32P1	Q8NGA4	272 aa		12.4	□□□□□ -0.42
APTX-231	ENST00000494973	TMEM41A	Q96HV5	264 aa		12.4	□□□□□ -0.42
APTX-231	ENST00000494973	ZNF597	Q96LX8	424 aa		12.4	□□□□□ -0.42
APTX-231	ENST00000494973	FRMD6	Q96NE9	622 aa		12.4	□□□□□ -0.42
APTX-231	ENST00000494973	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	12.4	□□□□□ -0.42
APTX-231	ENST00000494973	PTGES2	Q9H7Z7	377 aa		12.4	□□□□□ -0.42
APTX-231	ENST00000494973	IL1RAP	Q9NPH3	570 aa		12.4	□□□□□ -0.42
APTX-231	ENST00000494973	CCM2L	Q9NUG4	571 aa	Predicted RBP	12.4	□□□□□ -0.42
APTX-231	ENST00000494973	ARMC1	Q9NVT9	282 aa		12.4	□□□□□ -0.42
APTX-231	ENST00000494973	DNAJB12	Q9NXW2	375 aa	Known RBP	12.4	□□□□□ -0.42
APTX-231	ENST00000494973	B4GALT7	Q9UBV7	327 aa		12.4	□□□□□ -0.42
APTX-231	ENST00000494973	KCNE5	Q9UJ90	142 aa		12.4	□□□□□ -0.42
APTX-231	ENST00000494973	SH3GLB1	Q9Y371	365 aa		12.4	□□□□□ -0.42
APTX-231	ENST00000494973	PTPRQ	Q9UMZ3	2332 aa		12.39	□□□□□ -0.43
APTX-231	ENST00000494973	TAF4	O00268	1085 aa		12.39	□□□□□ -0.43
APTX-231	ENST00000494973	HNRNPR	O43390	633 aa	Known RBP	12.39	□□□□□ -0.43
APTX-231	ENST00000494973	HCRTR2	O43614	444 aa		12.39	□□□□□ -0.43
APTX-231	ENST00000494973	DPM1	O60762	260 aa		12.39	□□□□□ -0.43
APTX-231	ENST00000494973	NEURL1	O76050	574 aa		12.39	□□□□□ -0.43
APTX-231	ENST00000494973	UBTFL6	P0CB48	400 aa	Predicted RBP	12.39	□□□□□ -0.43
APTX-231	ENST00000494973	PGC	P20142	388 aa		12.39	□□□□□ -0.43
APTX-231	ENST00000494973	CNR1	P21554	472 aa		12.39	□□□□□ -0.43
APTX-231	ENST00000494973	MAGEA2	P43356	314 aa		12.39	□□□□□ -0.43
APTX-231	ENST00000494973	P2RX1	P51575	399 aa		12.39	□□□□□ -0.43
APTX-231	ENST00000494973	SMIM11A	P58511	58 aa		12.39	□□□□□ -0.43
APTX-231	ENST00000494973	RAPSN	Q13702	412 aa		12.39	□□□□□ -0.43
APTX-231	ENST00000494973	CBFB	Q13951	182 aa		12.39	□□□□□ -0.43
APTX-231	ENST00000494973	TBR1	Q16650	682 aa		12.39	□□□□□ -0.43
APTX-231	ENST00000494973	SLC25A25	Q6KCM7	469 aa		12.39	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms