RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 NID1P14543 1247 aa13.04□□□□□ -0.32
PCCB-219ENST00000494742 CARD18P57730 90 aa13.04□□□□□ -0.32
PCCB-219ENST00000494742 SLC18A2Q05940 514 aa13.04□□□□□ -0.32
PCCB-219ENST00000494742 ZNF844Q08AG5 666 aa13.04□□□□□ -0.32
PCCB-219ENST00000494742 VEZF1Q14119 521 aa13.04□□□□□ -0.32
PCCB-219ENST00000494742 TMEM201Q5SNT2 666 aa13.04□□□□□ -0.32
PCCB-219ENST00000494742 NCMAPQ5T1S8 102 aa13.04□□□□□ -0.32
PCCB-219ENST00000494742 MFSD12Q6NUT3 480 aa13.04□□□□□ -0.32
PCCB-219ENST00000494742 ZCCHC12Q6PEW1 402 aa13.04□□□□□ -0.32
PCCB-219ENST00000494742 PODNL1Q6PEZ8 512 aa13.04□□□□□ -0.32
PCCB-219ENST00000494742 GABRG1Q8N1C3 465 aa13.04□□□□□ -0.32
PCCB-219ENST00000494742 LILRB1Q8NHL6 650 aaPredicted RBP13.04□□□□□ -0.32
PCCB-219ENST00000494742 RNF128Q8TEB7 428 aa13.04□□□□□ -0.32
PCCB-219ENST00000494742 HSD17B8Q92506 261 aa13.04□□□□□ -0.32
PCCB-219ENST00000494742 SLC9A6Q92581 669 aa13.04□□□□□ -0.32
PCCB-219ENST00000494742 OSTF1Q92882 214 aa13.04□□□□□ -0.32
PCCB-219ENST00000494742 CPNE4Q96A23 557 aaPredicted RBP13.04□□□□□ -0.32
PCCB-219ENST00000494742 S100PBPQ96BU1 408 aa13.04□□□□□ -0.32
PCCB-219ENST00000494742 REXO5Q96IC2 774 aaKnown RBP13.04□□□□□ -0.32
PCCB-219ENST00000494742 KLHL15Q96M94 604 aa13.04□□□□□ -0.32
PCCB-219ENST00000494742 RNF145Q96MT1 663 aa13.04□□□□□ -0.32
PCCB-219ENST00000494742 REG4Q9BYZ8 158 aa13.04□□□□□ -0.32
PCCB-219ENST00000494742 UBQLN4Q9NRR5 601 aa13.04□□□□□ -0.32
PCCB-219ENST00000494742 MED17Q9NVC6 651 aa13.04□□□□□ -0.32
PCCB-219ENST00000494742 POLR3HQ9Y535 204 aaPredicted RBP13.04□□□□□ -0.32
PCCB-219ENST00000494742 NPIPB8E9PQR5 432 aa13.03□□□□□ -0.32
PCCB-219ENST00000494742 UBFD1O14562 309 aaKnown RBP13.03□□□□□ -0.32
PCCB-219ENST00000494742 PDPK1O15530 556 aa13.03□□□□□ -0.32
PCCB-219ENST00000494742 TBX19O60806 448 aa13.03□□□□□ -0.32
PCCB-219ENST00000494742 IFNA2P01563 188 aa13.03□□□□□ -0.32
PCCB-219ENST00000494742 CD3EP07766 207 aa13.03□□□□□ -0.32
PCCB-219ENST00000494742 THBS1P07996 1170 aa13.03□□□□□ -0.32
PCCB-219ENST00000494742 HPGDP15428 266 aa13.03□□□□□ -0.32
PCCB-219ENST00000494742 PRPH2P23942 346 aa13.03□□□□□ -0.32
PCCB-219ENST00000494742 ELK4P28324 431 aa13.03□□□□□ -0.32
PCCB-219ENST00000494742 ADH6P28332 368 aa13.03□□□□□ -0.32
PCCB-219ENST00000494742 GPC1P35052 558 aa13.03□□□□□ -0.32
PCCB-219ENST00000494742 SERPINB4P48594 390 aa13.03□□□□□ -0.32
PCCB-219ENST00000494742 FOXA1P55317 472 aa13.03□□□□□ -0.32
PCCB-219ENST00000494742 HSPB3Q12988 150 aa13.03□□□□□ -0.32
PCCB-219ENST00000494742 P2RY6Q15077 328 aa13.03□□□□□ -0.32
PCCB-219ENST00000494742 ZNF239Q16600 458 aaKnown RBP13.03□□□□□ -0.32
PCCB-219ENST00000494742 SFRP5Q5T4F7 317 aa13.03□□□□□ -0.32
PCCB-219ENST00000494742 SSX8Q7RTT4 187 aa13.03□□□□□ -0.32
PCCB-219ENST00000494742 ZNF551Q7Z340 670 aaPredicted RBP13.03□□□□□ -0.32
PCCB-219ENST00000494742 LILRA2Q8N149 483 aa13.03□□□□□ -0.32
PCCB-219ENST00000494742 ZFP28Q8NHY6 868 aa13.03□□□□□ -0.32
PCCB-219ENST00000494742 RAB3IL1Q8TBN0 382 aa13.03□□□□□ -0.32
PCCB-219ENST00000494742 SMAP2Q8WU79 429 aaPredicted RBP13.03□□□□□ -0.32
PCCB-219ENST00000494742 IFT81Q8WYA0 676 aa13.03□□□□□ -0.32
PCCB-219ENST00000494742 GTPBP3Q969Y2 492 aaKnown RBP13.03□□□□□ -0.32
PCCB-219ENST00000494742 GRIP2Q9C0E4 1043 aa13.03□□□□□ -0.32
PCCB-219ENST00000494742 C12orf49Q9H741 205 aa13.03□□□□□ -0.32
PCCB-219ENST00000494742 EQTNQ9NQ60 294 aa13.03□□□□□ -0.32
PCCB-219ENST00000494742 FBXO34Q9NWN3 711 aa13.03□□□□□ -0.32
PCCB-219ENST00000494742 KLHL13Q9P2N7 655 aa13.03□□□□□ -0.32
PCCB-219ENST00000494742 DCDC2Q9UHG0 476 aa13.03□□□□□ -0.32
PCCB-219ENST00000494742 CR1P17927 2039 aa13.02□□□□□ -0.33
PCCB-219ENST00000494742 GJE1A6NN92 205 aa13.02□□□□□ -0.33
PCCB-219ENST00000494742 SCDO00767 359 aa13.02□□□□□ -0.33
PCCB-219ENST00000494742 CD5LO43866 347 aa13.02□□□□□ -0.33
PCCB-219ENST00000494742 ZNF500O60304 480 aaPredicted RBP13.02□□□□□ -0.33
PCCB-219ENST00000494742 KCNK2O95069 426 aa13.02□□□□□ -0.33
PCCB-219ENST00000494742 SOD3P08294 240 aa13.02□□□□□ -0.33
PCCB-219ENST00000494742 LINGO3P0C6S8 592 aa13.02□□□□□ -0.33
PCCB-219ENST00000494742 IL32P24001 234 aa13.02□□□□□ -0.33
PCCB-219ENST00000494742 GCAP28676 217 aa13.02□□□□□ -0.33
PCCB-219ENST00000494742 ECHS1P30084 290 aa13.02□□□□□ -0.33
PCCB-219ENST00000494742 FRKP42685 505 aaPredicted RBP13.02□□□□□ -0.33
PCCB-219ENST00000494742 MANFP55145 182 aaKnown RBP13.02□□□□□ -0.33
PCCB-219ENST00000494742 KIAA0040Q15053 153 aa13.02□□□□□ -0.33
PCCB-219ENST00000494742 WHAMMP3Q1A5X7 153 aa13.02□□□□□ -0.33
PCCB-219ENST00000494742 ZNF672Q499Z4 452 aaPredicted RBP13.02□□□□□ -0.33
PCCB-219ENST00000494742 FIGNL1Q6PIW4 674 aa13.02□□□□□ -0.33
PCCB-219ENST00000494742 TFAP2EQ6VUC0 442 aa13.02□□□□□ -0.33
PCCB-219ENST00000494742 DNM1P46Q6ZS02 220 aa13.02□□□□□ -0.33
PCCB-219ENST00000494742 MTERF4Q7Z6M4 381 aaKnown RBP13.02□□□□□ -0.33
PCCB-219ENST00000494742 TDRPQ86YL5 185 aa13.02□□□□□ -0.33
PCCB-219ENST00000494742 HIPK1Q86Z02 1210 aa13.02□□□□□ -0.33
PCCB-219ENST00000494742 CCNYL1Q8N7R7 359 aa13.02□□□□□ -0.33
PCCB-219ENST00000494742 NUP43Q8NFH3 380 aa13.02□□□□□ -0.33
PCCB-219ENST00000494742 B4GALNT2Q8NHY0 566 aa13.02□□□□□ -0.33
PCCB-219ENST00000494742 POC1BQ8TC44 478 aa13.02□□□□□ -0.33
PCCB-219ENST00000494742 ZBED6CLQ96FA7 236 aaPredicted RBP13.02□□□□□ -0.33
PCCB-219ENST00000494742 MS4A4EQ96PG1 132 aa13.02□□□□□ -0.33
PCCB-219ENST00000494742 NPAS1Q99742 590 aa13.02□□□□□ -0.33
PCCB-219ENST00000494742 SLCO5A1Q9H2Y9 848 aa13.02□□□□□ -0.33
PCCB-219ENST00000494742 L2HGDHQ9H9P8 463 aa13.02□□□□□ -0.33
PCCB-219ENST00000494742 BARX1Q9HBU1 254 aaPredicted RBP13.02□□□□□ -0.33
PCCB-219ENST00000494742 ACSS1Q9NUB1 689 aaPredicted RBP13.02□□□□□ -0.33
PCCB-219ENST00000494742 STAB1Q9NY15 2570 aa13.02□□□□□ -0.33
PCCB-219ENST00000494742 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.01□□□□□ -0.33
PCCB-219ENST00000494742 A0A1W2PP18 115 aa13.01□□□□□ -0.33
PCCB-219ENST00000494742 CLOCKO15516 846 aa13.01□□□□□ -0.33
PCCB-219ENST00000494742 SEC22BO75396 215 aa13.01□□□□□ -0.33
PCCB-219ENST00000494742 CRCPO75575 148 aa13.01□□□□□ -0.33
PCCB-219ENST00000494742 PRKD3O94806 890 aa13.01□□□□□ -0.33
PCCB-219ENST00000494742 OPN1LWP04000 364 aa13.01□□□□□ -0.33
PCCB-219ENST00000494742 UROSP10746 265 aa13.01□□□□□ -0.33
PCCB-219ENST00000494742 PRKAG1P54619 331 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms