RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 WDR45Q9Y484 360 aa21.25■□□□□ 0.99
CLIC3-203ENST00000494426 TRBV5-3A0A0A0MS03 114 aa21.24■□□□□ 0.99
CLIC3-203ENST00000494426 KIAA0513O60268 411 aa21.24■□□□□ 0.99
CLIC3-203ENST00000494426 ACTL6AO96019 429 aa21.24■□□□□ 0.99
CLIC3-203ENST00000494426 HK1P19367 917 aa21.24■□□□□ 0.99
CLIC3-203ENST00000494426 ACVR2AP27037 513 aa21.24■□□□□ 0.99
CLIC3-203ENST00000494426 MAGEA8P43361 318 aa21.24■□□□□ 0.99
CLIC3-203ENST00000494426 CHRNEQ04844 493 aa21.24■□□□□ 0.99
CLIC3-203ENST00000494426 GANABQ14697 944 aaKnown RBP21.24■□□□□ 0.99
CLIC3-203ENST00000494426 PDZK1Q5T2W1 519 aa21.24■□□□□ 0.99
CLIC3-203ENST00000494426 ARSKQ6UWY0 536 aa21.24■□□□□ 0.99
CLIC3-203ENST00000494426 ITLN2Q8WWU7 325 aaPredicted RBP21.24■□□□□ 0.99
CLIC3-203ENST00000494426 DTNBP1Q96EV8 351 aa21.24■□□□□ 0.99
CLIC3-203ENST00000494426 SH3YL1Q96HL8 342 aaPredicted RBP21.24■□□□□ 0.99
CLIC3-203ENST00000494426 SAR1AQ9NR31 198 aa21.24■□□□□ 0.99
CLIC3-203ENST00000494426 POLE3Q9NRF9 147 aa21.24■□□□□ 0.99
CLIC3-203ENST00000494426 ALKBH4Q9NXW9 302 aa21.24■□□□□ 0.99
CLIC3-203ENST00000494426 VAPAQ9P0L0 249 aa21.24■□□□□ 0.99
CLIC3-203ENST00000494426 DOPEY2Q9Y3R5 2298 aa21.24■□□□□ 0.99
CLIC3-203ENST00000494426 CLIC1O00299 241 aa21.23■□□□□ 0.99
CLIC3-203ENST00000494426 WDR1O75083 606 aa21.23■□□□□ 0.99
CLIC3-203ENST00000494426 TNFRSF21O75509 655 aa21.23■□□□□ 0.99
CLIC3-203ENST00000494426 H6PDO95479 791 aa21.23■□□□□ 0.99
CLIC3-203ENST00000494426 CHRM4P08173 479 aa21.23■□□□□ 0.99
CLIC3-203ENST00000494426 MSX1P28360 303 aa21.23■□□□□ 0.99
CLIC3-203ENST00000494426 CRATP43155 626 aa21.23■□□□□ 0.99
CLIC3-203ENST00000494426 STARP49675 285 aa21.23■□□□□ 0.99
CLIC3-203ENST00000494426 ANXA11P50995 505 aaKnown RBP21.23■□□□□ 0.99
CLIC3-203ENST00000494426 SEC24CP53992 1094 aa21.23■□□□□ 0.99
CLIC3-203ENST00000494426 ZNF117Q03924 483 aa21.23■□□□□ 0.99
CLIC3-203ENST00000494426 NDUFAF6Q330K2 333 aa21.23■□□□□ 0.99
CLIC3-203ENST00000494426 GPAT3Q53EU6 434 aa21.23■□□□□ 0.99
CLIC3-203ENST00000494426 MTFR2Q6P444 385 aa21.23■□□□□ 0.99
CLIC3-203ENST00000494426 CBLN3Q6UW01 205 aa21.23■□□□□ 0.99
CLIC3-203ENST00000494426 DLEU7Q6UYE1 221 aa21.23■□□□□ 0.99
CLIC3-203ENST00000494426 RETREG3Q86VR2 466 aa21.23■□□□□ 0.99
CLIC3-203ENST00000494426 ULK2Q8IYT8 1036 aa21.23■□□□□ 0.99
CLIC3-203ENST00000494426 B4GALNT2Q8NHY0 566 aa21.23■□□□□ 0.99
CLIC3-203ENST00000494426 TRNT1Q96Q11 434 aaKnown RBP21.23■□□□□ 0.99
CLIC3-203ENST00000494426 SLC38A1Q9H2H9 487 aa21.23■□□□□ 0.99
CLIC3-203ENST00000494426 RUBCNLQ9H714 662 aa21.23■□□□□ 0.99
CLIC3-203ENST00000494426 HHATLQ9HCP6 504 aa21.23■□□□□ 0.99
CLIC3-203ENST00000494426 LIPT1Q9Y234 373 aa21.23■□□□□ 0.99
CLIC3-203ENST00000494426 COL12A1Q99715 3063 aa21.22■□□□□ 0.99
CLIC3-203ENST00000494426 SERINC4A6NH21 518 aa21.22■□□□□ 0.99
CLIC3-203ENST00000494426 FIGNL2A6NMB9 653 aa21.22■□□□□ 0.99
CLIC3-203ENST00000494426 CHMP24386 653 aa21.22■□□□□ 0.99
CLIC3-203ENST00000494426 LHX2P50458 406 aa21.22■□□□□ 0.99
CLIC3-203ENST00000494426 RGNQ15493 299 aa21.22■□□□□ 0.99
CLIC3-203ENST00000494426 TMEM44Q2T9K0 475 aa21.22■□□□□ 0.99
CLIC3-203ENST00000494426 GLYR1Q49A26 553 aaPredicted RBP21.22■□□□□ 0.99
CLIC3-203ENST00000494426 HMGN2P46Q86SG4 172 aa21.22■□□□□ 0.99
CLIC3-203ENST00000494426 MRGPRGQ86SM5 289 aa21.22■□□□□ 0.99
CLIC3-203ENST00000494426 EID3Q8N140 333 aa21.22■□□□□ 0.99
CLIC3-203ENST00000494426 ZNF619Q8N2I2 560 aa21.22■□□□□ 0.99
CLIC3-203ENST00000494426 ZNF614Q8N883 585 aa21.22■□□□□ 0.99
CLIC3-203ENST00000494426 OR5M1Q8NGP8 315 aa21.22■□□□□ 0.99
CLIC3-203ENST00000494426 TSPEARQ8WU66 669 aa21.22■□□□□ 0.99
CLIC3-203ENST00000494426 SFXN2Q96NB2 322 aa21.22■□□□□ 0.99
CLIC3-203ENST00000494426 NPAS1Q99742 590 aa21.22■□□□□ 0.99
CLIC3-203ENST00000494426 LEF1Q9UJU2 399 aaPredicted RBP21.22■□□□□ 0.99
CLIC3-203ENST00000494426 ICAM5Q9UMF0 924 aa21.22■□□□□ 0.99
CLIC3-203ENST00000494426 CARD8Q9Y2G2 431 aa21.22■□□□□ 0.99
CLIC3-203ENST00000494426 NDUFAF1Q9Y375 327 aa21.22■□□□□ 0.99
CLIC3-203ENST00000494426 GMEB1Q9Y692 573 aa21.22■□□□□ 0.99
CLIC3-203ENST00000494426 ARHGAP21Q5T5U3 1957 aa21.22■□□□□ 0.99
CLIC3-203ENST00000494426 AHRRA9YTQ3 701 aa21.21■□□□□ 0.99
CLIC3-203ENST00000494426 KDM4EB2RXH2 506 aaPredicted RBP21.21■□□□□ 0.99
CLIC3-203ENST00000494426 SHISA8B8ZZ34 492 aa21.21■□□□□ 0.99
CLIC3-203ENST00000494426 HCRTR2O43614 444 aa21.21■□□□□ 0.99
CLIC3-203ENST00000494426 CLDN1O95832 211 aa21.21■□□□□ 0.99
CLIC3-203ENST00000494426 SNRPB2P08579 225 aaKnown RBP21.21■□□□□ 0.99
CLIC3-203ENST00000494426 NUDT7P0C024 238 aa21.21■□□□□ 0.99
CLIC3-203ENST00000494426 TFPTP0C1Z6 253 aa21.21■□□□□ 0.99
CLIC3-203ENST00000494426 GABRA1P14867 456 aa21.21■□□□□ 0.99
CLIC3-203ENST00000494426 CPN1P15169 458 aa21.21■□□□□ 0.99
CLIC3-203ENST00000494426 ADH7P40394 386 aa21.21■□□□□ 0.99
CLIC3-203ENST00000494426 NUP107P57740 925 aa21.21■□□□□ 0.99
CLIC3-203ENST00000494426 DSTNP60981 165 aa21.21■□□□□ 0.99
CLIC3-203ENST00000494426 KLF10Q13118 480 aa21.21■□□□□ 0.99
CLIC3-203ENST00000494426 ZNF630Q2M218 657 aaPredicted RBP21.21■□□□□ 0.99
CLIC3-203ENST00000494426 C1orf185Q5T7R7 199 aa21.21■□□□□ 0.99
CLIC3-203ENST00000494426 TMEM211Q6ICI0 200 aa21.21■□□□□ 0.99
CLIC3-203ENST00000494426 LRRC74BQ6ZQY2 392 aa21.21■□□□□ 0.99
CLIC3-203ENST00000494426 C10orf111Q8N326 155 aa21.21■□□□□ 0.99
CLIC3-203ENST00000494426 TTYH2Q9BSA4 534 aa21.21■□□□□ 0.99
CLIC3-203ENST00000494426 QRSL1Q9H0R6 528 aaKnown RBP21.21■□□□□ 0.99
CLIC3-203ENST00000494426 IKZF5Q9H5V7 419 aa21.21■□□□□ 0.99
CLIC3-203ENST00000494426 CAMK2AQ9UQM7 478 aa21.21■□□□□ 0.99
CLIC3-203ENST00000494426 VDAC3Q9Y277 283 aa21.21■□□□□ 0.99
CLIC3-203ENST00000494426 LRRK2Q5S007 2527 aa21.21■□□□□ 0.99
CLIC3-203ENST00000494426 KIAA1549Q9HCM3 1950 aa21.2■□□□□ 0.98
CLIC3-203ENST00000494426 OR2M5A3KFT3 312 aa21.2■□□□□ 0.98
CLIC3-203ENST00000494426 H3BNH8 94 aa21.2■□□□□ 0.98
CLIC3-203ENST00000494426 HOXD4P09016 255 aaPredicted RBP21.2■□□□□ 0.98
CLIC3-203ENST00000494426 GLI4P10075 376 aa21.2■□□□□ 0.98
CLIC3-203ENST00000494426 NR2F1P10589 423 aa21.2■□□□□ 0.98
CLIC3-203ENST00000494426 BMP2P12643 396 aa21.2■□□□□ 0.98
CLIC3-203ENST00000494426 GCKP35557 465 aa21.2■□□□□ 0.98
CLIC3-203ENST00000494426 P2RX1P51575 399 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms