RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 CSAG2Q9Y5P2 127 aa8.72□□□□□ -1.01
BRCA1-219ENST00000491747 TCRBV16S1A1N1A0A5B0 115 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 WASHC1A8K0Z3 465 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 A8MUA0 341 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 CLIC1O00299 241 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 PCDH17O14917 1159 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 DYRK3O43781 588 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 TMPRSS11DO60235 418 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 DPM1O60762 260 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 PRKRAO75569 313 aaKnown RBP8.71□□□□□ -1.01
BRCA1-219ENST00000491747 DIRAS1O95057 198 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 GBAP04062 536 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 SEMG1P04279 462 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 ZNF10P21506 573 aaPredicted RBP8.71□□□□□ -1.01
BRCA1-219ENST00000491747 EPHA2P29317 976 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 PPP2R1BP30154 601 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 TGFBR1P36897 503 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 LIPAP38571 399 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 TRPC1P48995 793 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 DEFA1P59665 94 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 DEFA3P59666 94 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 PRKCDQ05655 676 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 TGM3Q08188 693 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 SLAMF1Q13291 335 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 TIGD6Q17RP2 521 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 FAHD1Q6P587 224 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 EIF3MQ7L2H7 374 aaKnown RBP8.71□□□□□ -1.01
BRCA1-219ENST00000491747 ENTHD1Q8IYW4 607 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 BRIX1Q8TDN6 353 aaKnown RBP8.71□□□□□ -1.01
BRCA1-219ENST00000491747 HRASLS5Q96KN8 279 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 PANX1Q96RD7 426 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 MFRPQ9BY79 579 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 LYRM4Q9HD34 91 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 PRTFDC1Q9NRG1 225 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 PPT2Q9UMR5 302 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 ZNF451Q9Y4E5 1061 aa8.71□□□□□ -1.01
BRCA1-219ENST00000491747 A0A0A6YYD5 115 aa8.71□□□□□ -1.02
BRCA1-219ENST00000491747 PNMA8CA0A1B0GUJ8 204 aa8.71□□□□□ -1.02
BRCA1-219ENST00000491747 FAM47E-STBD1D6RA91 191 aa8.71□□□□□ -1.02
BRCA1-219ENST00000491747 SERPINA7P05543 415 aa8.71□□□□□ -1.02
BRCA1-219ENST00000491747 PRPH2P23942 346 aa8.71□□□□□ -1.02
BRCA1-219ENST00000491747 B3GNTL1Q67FW5 361 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-219ENST00000491747 C18orf63Q68DL7 685 aa8.71□□□□□ -1.02
BRCA1-219ENST00000491747 MRM1Q6IN84 353 aaKnown RBP8.71□□□□□ -1.02
BRCA1-219ENST00000491747 PAPD4Q6PIY7 484 aaKnown RBP8.71□□□□□ -1.02
BRCA1-219ENST00000491747 CBLL1Q75N03 491 aa8.71□□□□□ -1.02
BRCA1-219ENST00000491747 CCDC71Q8IV32 467 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-219ENST00000491747 SIRT6Q8N6T7 355 aa8.71□□□□□ -1.02
BRCA1-219ENST00000491747 HSH2DQ96JZ2 352 aa8.71□□□□□ -1.02
BRCA1-219ENST00000491747 GABARAPL3Q9BY60 117 aa8.71□□□□□ -1.02
BRCA1-219ENST00000491747 ROGDIQ9GZN7 287 aa8.71□□□□□ -1.02
BRCA1-219ENST00000491747 DDX31Q9H8H2 851 aaKnown RBP8.71□□□□□ -1.02
BRCA1-219ENST00000491747 CCDC59Q9P031 241 aaKnown RBP8.71□□□□□ -1.02
BRCA1-219ENST00000491747 C19orf25Q9UFG5 118 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-219ENST00000491747 ATG4BQ9Y4P1 393 aa8.71□□□□□ -1.02
BRCA1-219ENST00000491747 ASB4Q9Y574 426 aa8.71□□□□□ -1.02
BRCA1-219ENST00000491747 PYCARD-AS1I3L0S3 204 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 LDB3O75112 727 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 APOA1P02647 267 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 GPX2P18283 190 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 SDC1P18827 310 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 PRPS1L1P21108 318 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 HSD17B7P56937 341 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 KLRB1Q12918 225 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 VEZF1Q14119 521 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 BTBD16Q32M84 506 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 PLAG1Q6DJT9 500 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 OR4F3Q6IEY1 312 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 IGFL2Q6UWQ7 119 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 ZNF551Q7Z340 670 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-219ENST00000491747 VTCN1Q7Z7D3 282 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 CCDC103Q8IW40 242 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 ZZZ3Q8IYH5 903 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 SLC7A5P1Q8MH63 180 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 NFAM1Q8NET5 270 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-219ENST00000491747 APH1BQ8WW43 257 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 UBE2FQ969M7 185 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 ANKRD9Q96BM1 317 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-219ENST00000491747 EPYCQ99645 322 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 NXF2Q9GZY0 626 aaKnown RBP8.7□□□□□ -1.02
BRCA1-219ENST00000491747 HOXD1Q9GZZ0 328 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 PLCXD1Q9NUJ7 323 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 LUZP4Q9P127 313 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 C5AR2Q9P296 337 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 PTGFRNQ9P2B2 879 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 PSORS1C1Q9UIG5 152 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 MKLN1Q9UL63 735 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 MMACHCQ9Y4U1 282 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 PCDHGB7Q9Y5F8 929 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 PEX16Q9Y5Y5 336 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 A0A1W2PR48 441 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 CLCA1A8K7I4 914 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 PROM1O43490 865 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 CTNSO60931 367 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 KCNK2O95069 426 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 LRATO95237 230 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 DBTP11182 482 aaKnown RBP8.7□□□□□ -1.02
BRCA1-219ENST00000491747 CPN2P22792 545 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 GADD45AP24522 165 aa8.7□□□□□ -1.02
BRCA1-219ENST00000491747 TACR1P25103 407 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms