RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 SLC47A1Q96FL8 570 aa12.14□□□□□ -0.47
SNX12-205ENST00000490561 NODALQ96S42 347 aa12.14□□□□□ -0.47
SNX12-205ENST00000490561 POLR2J2Q9GZM3 115 aaKnown RBP12.14□□□□□ -0.47
SNX12-205ENST00000490561 POLR2J3Q9H1A7 115 aaKnown RBP12.14□□□□□ -0.47
SNX12-205ENST00000490561 KCNE5Q9UJ90 142 aa12.14□□□□□ -0.47
SNX12-205ENST00000490561 CNOT11Q9UKZ1 510 aaKnown RBP12.14□□□□□ -0.47
SNX12-205ENST00000490561 RRP15Q9Y3B9 282 aaKnown RBP12.14□□□□□ -0.47
SNX12-205ENST00000490561 ZNF264O43296 627 aa12.13□□□□□ -0.47
SNX12-205ENST00000490561 ANGPTL1O95841 491 aa12.13□□□□□ -0.47
SNX12-205ENST00000490561 IFNW1P05000 195 aa12.13□□□□□ -0.47
SNX12-205ENST00000490561 CD46P15529 392 aa12.13□□□□□ -0.47
SNX12-205ENST00000490561 SLC7A1P30825 629 aa12.13□□□□□ -0.47
SNX12-205ENST00000490561 CD96P40200 585 aa12.13□□□□□ -0.47
SNX12-205ENST00000490561 CASP3P42574 277 aa12.13□□□□□ -0.47
SNX12-205ENST00000490561 SLC6A8P48029 635 aa12.13□□□□□ -0.47
SNX12-205ENST00000490561 SUMO3P55854 103 aaPredicted RBP12.13□□□□□ -0.47
SNX12-205ENST00000490561 RGS8P57771 180 aaPredicted RBP12.13□□□□□ -0.47
SNX12-205ENST00000490561 RAPSNQ13702 412 aa12.13□□□□□ -0.47
SNX12-205ENST00000490561 OR1C1Q15619 314 aa12.13□□□□□ -0.47
SNX12-205ENST00000490561 TBR1Q16650 682 aa12.13□□□□□ -0.47
SNX12-205ENST00000490561 NRF1Q16656 503 aa12.13□□□□□ -0.47
SNX12-205ENST00000490561 DUSP7Q16829 419 aa12.13□□□□□ -0.47
SNX12-205ENST00000490561 FNDC7Q5VTL7 733 aa12.13□□□□□ -0.47
SNX12-205ENST00000490561 AAGABQ6PD74 315 aa12.13□□□□□ -0.47
SNX12-205ENST00000490561 IGFL3Q6UXB1 125 aa12.13□□□□□ -0.47
SNX12-205ENST00000490561 RANBP3LQ86VV4 465 aaPredicted RBP12.13□□□□□ -0.47
SNX12-205ENST00000490561 PSD4Q8NDX1 1056 aa12.13□□□□□ -0.47
SNX12-205ENST00000490561 FAM71CQ8NEG0 241 aa12.13□□□□□ -0.47
SNX12-205ENST00000490561 GPR32P1Q8NGA4 272 aa12.13□□□□□ -0.47
SNX12-205ENST00000490561 C5orf34Q96MH7 638 aa12.13□□□□□ -0.47
SNX12-205ENST00000490561 ARHGDIGQ99819 225 aa12.13□□□□□ -0.47
SNX12-205ENST00000490561 ANGPTL4Q9BY76 406 aa12.13□□□□□ -0.47
SNX12-205ENST00000490561 LAT2Q9GZY6 243 aa12.13□□□□□ -0.47
SNX12-205ENST00000490561 CCM2LQ9NUG4 571 aaPredicted RBP12.13□□□□□ -0.47
SNX12-205ENST00000490561 FLRT3Q9NZU0 649 aa12.13□□□□□ -0.47
SNX12-205ENST00000490561 PCDHGB6Q9Y5F9 930 aa12.13□□□□□ -0.47
SNX12-205ENST00000490561 WIF1Q9Y5W5 379 aa12.13□□□□□ -0.47
SNX12-205ENST00000490561 IGLV3-32A0A0A0MS00 114 aa12.12□□□□□ -0.47
SNX12-205ENST00000490561 CENPVL1A0A0U1RR11 272 aa12.12□□□□□ -0.47
SNX12-205ENST00000490561 SCO2O43819 266 aa12.12□□□□□ -0.47
SNX12-205ENST00000490561 FMO6PO60774 539 aa12.12□□□□□ -0.47
SNX12-205ENST00000490561 SLC25A12O75746 678 aa12.12□□□□□ -0.47
SNX12-205ENST00000490561 SEMG1P04279 462 aa12.12□□□□□ -0.47
SNX12-205ENST00000490561 FABP3P05413 133 aa12.12□□□□□ -0.47
SNX12-205ENST00000490561 FCGR1AP12314 374 aa12.12□□□□□ -0.47
SNX12-205ENST00000490561 IFNA8P32881 189 aa12.12□□□□□ -0.47
SNX12-205ENST00000490561 ELF3P78545 371 aaPredicted RBP12.12□□□□□ -0.47
SNX12-205ENST00000490561 ZNF468Q5VIY5 522 aaPredicted RBP12.12□□□□□ -0.47
SNX12-205ENST00000490561 ENPP6Q6UWR7 440 aa12.12□□□□□ -0.47
SNX12-205ENST00000490561 PIWIL3Q7Z3Z3 882 aaKnown RBP12.12□□□□□ -0.47
SNX12-205ENST00000490561 VTCN1Q7Z7D3 282 aa12.12□□□□□ -0.47
SNX12-205ENST00000490561 MARCH3Q86UD3 253 aa12.12□□□□□ -0.47
SNX12-205ENST00000490561 PACS2Q86VP3 889 aa12.12□□□□□ -0.47
SNX12-205ENST00000490561 CYP4Z1Q86W10 505 aa12.12□□□□□ -0.47
SNX12-205ENST00000490561 CARM1Q86X55 608 aa12.12□□□□□ -0.47
SNX12-205ENST00000490561 ADGRG5Q8IZF4 528 aa12.12□□□□□ -0.47
SNX12-205ENST00000490561 ZADH2Q8N4Q0 377 aa12.12□□□□□ -0.47
SNX12-205ENST00000490561 TMEM178AQ8NBL3 297 aa12.12□□□□□ -0.47
SNX12-205ENST00000490561 PAPD5Q8NDF8 572 aaKnown RBP12.12□□□□□ -0.47
SNX12-205ENST00000490561 CANT1Q8WVQ1 401 aa12.12□□□□□ -0.47
SNX12-205ENST00000490561 TMEM41AQ96HV5 264 aa12.12□□□□□ -0.47
SNX12-205ENST00000490561 FRMD6Q96NE9 622 aa12.12□□□□□ -0.47
SNX12-205ENST00000490561 ZNF347Q96SE7 839 aa12.12□□□□□ -0.47
SNX12-205ENST00000490561 SEPHS2Q99611 448 aa12.12□□□□□ -0.47
SNX12-205ENST00000490561 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.12□□□□□ -0.47
SNX12-205ENST00000490561 IL1RAPQ9NPH3 570 aa12.12□□□□□ -0.47
SNX12-205ENST00000490561 ARMC1Q9NVT9 282 aa12.12□□□□□ -0.47
SNX12-205ENST00000490561 DNAJB12Q9NXW2 375 aaKnown RBP12.12□□□□□ -0.47
SNX12-205ENST00000490561 PPP4R1LQ9P1A2 415 aa12.12□□□□□ -0.47
SNX12-205ENST00000490561 TESQ9UGI8 421 aaKnown RBP12.12□□□□□ -0.47
SNX12-205ENST00000490561 AURKCQ9UQB9 309 aa12.12□□□□□ -0.47
SNX12-205ENST00000490561 KLF13Q9Y2Y9 288 aaPredicted RBP12.12□□□□□ -0.47
SNX12-205ENST00000490561 SH3GLB1Q9Y371 365 aa12.12□□□□□ -0.47
SNX12-205ENST00000490561 CPAMD8Q8IZJ3 1885 aa12.11□□□□□ -0.47
SNX12-205ENST00000490561 TRAV17A0A0B4J275 112 aa12.11□□□□□ -0.47
SNX12-205ENST00000490561 TMEM229AB2RXF0 380 aa12.11□□□□□ -0.47
SNX12-205ENST00000490561 FAM47E-STBD1D6RA91 191 aa12.11□□□□□ -0.47
SNX12-205ENST00000490561 FAAHO00519 579 aa12.11□□□□□ -0.47
SNX12-205ENST00000490561 AP3D1O14617 1153 aa12.11□□□□□ -0.47
SNX12-205ENST00000490561 HNRNPRO43390 633 aaKnown RBP12.11□□□□□ -0.47
SNX12-205ENST00000490561 TPST1O60507 370 aa12.11□□□□□ -0.47
SNX12-205ENST00000490561 NEURL1O76050 574 aa12.11□□□□□ -0.47
SNX12-205ENST00000490561 CCL3P10147 92 aa12.11□□□□□ -0.47
SNX12-205ENST00000490561 CNR1P21554 472 aa12.11□□□□□ -0.47
SNX12-205ENST00000490561 ELAVL4P26378 380 aaKnown RBP12.11□□□□□ -0.47
SNX12-205ENST00000490561 MAGEA2P43356 314 aa12.11□□□□□ -0.47
SNX12-205ENST00000490561 P2RX1P51575 399 aa12.11□□□□□ -0.47
SNX12-205ENST00000490561 GAS1P54826 345 aa12.11□□□□□ -0.47
SNX12-205ENST00000490561 SKP2Q13309 424 aa12.11□□□□□ -0.47
SNX12-205ENST00000490561 CBFBQ13951 182 aa12.11□□□□□ -0.47
SNX12-205ENST00000490561 CD226Q15762 336 aa12.11□□□□□ -0.47
SNX12-205ENST00000490561 SLC25A25Q6KCM7 469 aa12.11□□□□□ -0.47
SNX12-205ENST00000490561 APOOLQ6UXV4 268 aa12.11□□□□□ -0.47
SNX12-205ENST00000490561 HMGN2P46Q86SG4 172 aa12.11□□□□□ -0.47
SNX12-205ENST00000490561 CLIP4Q8N3C7 705 aa12.11□□□□□ -0.47
SNX12-205ENST00000490561 MDS2Q8NDY4 140 aa12.11□□□□□ -0.47
SNX12-205ENST00000490561 B4GALNT2Q8NHY0 566 aa12.11□□□□□ -0.47
SNX12-205ENST00000490561 NTNG2Q96CW9 530 aa12.11□□□□□ -0.47
SNX12-205ENST00000490561 FAM173AQ9BQD7 235 aa12.11□□□□□ -0.47
SNX12-205ENST00000490561 ZNF559Q9BR84 538 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms