RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 ANKZF1Q9H8Y5 726 aa11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 FKRPQ9H9S5 495 aa11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 LPAR2Q9HBW0 351 aa11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 GP6Q9HCN6 339 aa11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 HIF1ANQ9NWT6 349 aa11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 ZNF780BQ9Y6R6 833 aa11.97□□□□□ -0.49
EXOSC3-207ENST00000490516 B4DSR2 109 aa11.96□□□□□ -0.49
EXOSC3-207ENST00000490516 FOXE1O00358 373 aaPredicted RBP11.96□□□□□ -0.49
EXOSC3-207ENST00000490516 SEMA3DO95025 777 aa11.96□□□□□ -0.49
EXOSC3-207ENST00000490516 PGCP20142 388 aa11.96□□□□□ -0.49
EXOSC3-207ENST00000490516 ENPP1P22413 925 aa11.96□□□□□ -0.49
EXOSC3-207ENST00000490516 ALDH9A1P49189 494 aa11.96□□□□□ -0.49
EXOSC3-207ENST00000490516 MANFP55145 182 aaKnown RBP11.96□□□□□ -0.49
EXOSC3-207ENST00000490516 ZNF155Q12901 538 aaPredicted RBP11.96□□□□□ -0.49
EXOSC3-207ENST00000490516 PLPPR5Q32ZL2 321 aa11.96□□□□□ -0.49
EXOSC3-207ENST00000490516 ARL13AQ5H913 290 aaPredicted RBP11.96□□□□□ -0.49
EXOSC3-207ENST00000490516 C1orf229Q6ZS94 237 aaPredicted RBP11.96□□□□□ -0.49
EXOSC3-207ENST00000490516 CDYL2Q8N8U2 506 aa11.96□□□□□ -0.49
EXOSC3-207ENST00000490516 UBTD2Q8WUN7 234 aa11.96□□□□□ -0.49
EXOSC3-207ENST00000490516 SERPINI1Q99574 410 aa11.96□□□□□ -0.49
EXOSC3-207ENST00000490516 SLC6A7Q99884 636 aa11.96□□□□□ -0.49
EXOSC3-207ENST00000490516 NAT9Q9BTE0 207 aa11.96□□□□□ -0.49
EXOSC3-207ENST00000490516 TBL1XR1Q9BZK7 514 aa11.96□□□□□ -0.49
EXOSC3-207ENST00000490516 CDC42EP4Q9H3Q1 356 aaKnown RBP11.96□□□□□ -0.49
EXOSC3-207ENST00000490516 UNKLQ9H9P5 680 aaKnown RBP11.96□□□□□ -0.49
EXOSC3-207ENST00000490516 PFDN4Q9NQP4 134 aa11.96□□□□□ -0.49
EXOSC3-207ENST00000490516 NTMQ9P121 344 aa11.96□□□□□ -0.49
EXOSC3-207ENST00000490516 RNF11Q9Y3C5 154 aa11.96□□□□□ -0.49
EXOSC3-207ENST00000490516 PTGDR2Q9Y5Y4 395 aa11.96□□□□□ -0.49
EXOSC3-207ENST00000490516 A0A087WZY1 265 aa11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 A0A1W2PRB8 838 aa11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 CIB4A0PJX0 185 aa11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 SUPT3HB4E1H0 165 aa11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 UBXN8O00124 270 aa11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 SUPT3HO75486 399 aa11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 UTS2O95399 124 aa11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 IGHV3-9P01782 118 aa11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 DAOP14920 347 aa11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 SLC12A2P55011 1212 aa11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 ATP6V0D1P61421 351 aa11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 UBA52P62987 128 aaKnown RBP11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 POU4F1Q01851 419 aa11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 RNASEH2BQ5TBB1 312 aaKnown RBP11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 UGT2A3Q6UWM9 527 aa11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 TRABD2AQ86V40 505 aa11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 OR7G2Q8NG99 324 aa11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 TMEM186Q96B77 213 aa11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 ZBTB8AQ96BR9 441 aa11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 TM4SF18Q96CE8 201 aa11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 ZNF300Q96RE9 604 aaPredicted RBP11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 PSD2Q9BQI7 771 aa11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 SAP130Q9H0E3 1048 aa11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 ALG9Q9H6U8 611 aa11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 BCO1Q9HAY6 547 aa11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 TIGARQ9NQ88 270 aa11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 MED17Q9NVC6 651 aa11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 MED29Q9NX70 200 aa11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 NUDT4Q9NZJ9 180 aa11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 ADAM29Q9UKF5 820 aa11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 PSME2Q9UL46 239 aa11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 CHMP2BQ9UQN3 213 aa11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 MTO1Q9Y2Z2 717 aaKnown RBP11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 ANGPTL3Q9Y5C1 460 aa11.95□□□□□ -0.5
EXOSC3-207ENST00000490516 LOC105371242A0A075B767 164 aa11.94□□□□□ -0.5
EXOSC3-207ENST00000490516 C7orf72A4D263 438 aa11.94□□□□□ -0.5
EXOSC3-207ENST00000490516 CCT8L1PA6NM43 557 aa11.94□□□□□ -0.5
EXOSC3-207ENST00000490516 EFNA2O43921 213 aa11.94□□□□□ -0.5
EXOSC3-207ENST00000490516 GUCY1B2O75343 617 aa11.94□□□□□ -0.5
EXOSC3-207ENST00000490516 ELK3P41970 407 aa11.94□□□□□ -0.5
EXOSC3-207ENST00000490516 ZNF41P51814 821 aaPredicted RBP11.94□□□□□ -0.5
EXOSC3-207ENST00000490516 PRR5P85299 388 aa11.94□□□□□ -0.5
EXOSC3-207ENST00000490516 DECR1Q16698 335 aa11.94□□□□□ -0.5
EXOSC3-207ENST00000490516 GRAMD1BQ3KR37 738 aa11.94□□□□□ -0.5
EXOSC3-207ENST00000490516 CYP27C1Q4G0S4 372 aa11.94□□□□□ -0.5
EXOSC3-207ENST00000490516 PAGE2Q7Z2X7 111 aa11.94□□□□□ -0.5
EXOSC3-207ENST00000490516 ZNF100Q8IYN0 542 aa11.94□□□□□ -0.5
EXOSC3-207ENST00000490516 GATSQ8NAP1 163 aa11.94□□□□□ -0.5
EXOSC3-207ENST00000490516 TOR1AIP2Q8NFQ8 470 aa11.94□□□□□ -0.5
EXOSC3-207ENST00000490516 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.94□□□□□ -0.5
EXOSC3-207ENST00000490516 ERP27Q96DN0 273 aa11.94□□□□□ -0.5
EXOSC3-207ENST00000490516 LRRC37BQ96QE4 947 aa11.94□□□□□ -0.5
EXOSC3-207ENST00000490516 MCMBPQ9BTE3 642 aa11.94□□□□□ -0.5
EXOSC3-207ENST00000490516 SUCNR1Q9BXA5 334 aa11.94□□□□□ -0.5
EXOSC3-207ENST00000490516 C1QTNF5Q9BXJ0 243 aa11.94□□□□□ -0.5
EXOSC3-207ENST00000490516 TAS2R9Q9NYW1 312 aa11.94□□□□□ -0.5
EXOSC3-207ENST00000490516 UTS2RQ9UKP6 389 aa11.94□□□□□ -0.5
EXOSC3-207ENST00000490516 MOKQ9UQ07 419 aa11.94□□□□□ -0.5
EXOSC3-207ENST00000490516 GRIP1Q9Y3R0 1128 aa11.94□□□□□ -0.5
EXOSC3-207ENST00000490516 RGS14O43566 566 aa11.93□□□□□ -0.5
EXOSC3-207ENST00000490516 KERAO60938 352 aa11.93□□□□□ -0.5
EXOSC3-207ENST00000490516 PIAS1O75925 651 aa11.93□□□□□ -0.5
EXOSC3-207ENST00000490516 AVPP01185 164 aa11.93□□□□□ -0.5
EXOSC3-207ENST00000490516 CXCR5P32302 372 aa11.93□□□□□ -0.5
EXOSC3-207ENST00000490516 RAB10P61026 200 aa11.93□□□□□ -0.5
EXOSC3-207ENST00000490516 OCLNQ16625 522 aa11.93□□□□□ -0.5
EXOSC3-207ENST00000490516 FBLN7Q53RD9 439 aa11.93□□□□□ -0.5
EXOSC3-207ENST00000490516 TCHHL1Q5QJ38 904 aaPredicted RBP11.93□□□□□ -0.5
EXOSC3-207ENST00000490516 STEAP4Q687X5 459 aa11.93□□□□□ -0.5
EXOSC3-207ENST00000490516 FAHD2BQ6P2I3 314 aaPredicted RBP11.93□□□□□ -0.5
EXOSC3-207ENST00000490516 COMMD6Q7Z4G1 85 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms