RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 INAQ16352 499 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 WIPI1Q5MNZ9 446 aaPredicted RBP7.54□□□□□ -1.2
SF1-218ENST00000489544 ARSKQ6UWY0 536 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 RINLQ6ZS11 566 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 TRPM8Q7Z2W7 1104 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 NET1Q7Z628 596 aaPredicted RBP7.54□□□□□ -1.2
SF1-218ENST00000489544 FGD2Q7Z6J4 655 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 COMTD1Q86VU5 262 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 SLC22A16Q86VW1 577 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 CALHM3Q86XJ0 350 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 RNF148Q8N7C7 305 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 FADS6Q8N9I5 356 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 OR2M3Q8NG83 312 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 OR4K17Q8NGC6 315 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 OR8J3Q8NGG0 315 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 OR5M1Q8NGP8 315 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 CNOT9Q92600 299 aaKnown RBP7.54□□□□□ -1.2
SF1-218ENST00000489544 RELTQ969Z4 430 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 MIB2Q96AX9 1013 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 NSL1Q96IY1 281 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 ZNF583Q96ND8 569 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 SLX1AQ9BQ83 275 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 ECSITQ9BQ95 431 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 HOXD1Q9GZZ0 328 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 SLC6A15Q9H2J7 730 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 UBQLN3Q9H347 655 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 TMEM38AQ9H6F2 299 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 ZDHHC11Q9H8X9 412 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 MTHFD2LQ9H903 347 aaPredicted RBP7.54□□□□□ -1.2
SF1-218ENST00000489544 RYDENQ9NUL5 291 aaKnown RBP7.54□□□□□ -1.2
SF1-218ENST00000489544 RLIMQ9NVW2 624 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 RPH3AQ9Y2J0 694 aaPredicted RBP7.54□□□□□ -1.2
SF1-218ENST00000489544 SLC6A5Q9Y345 797 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 L3MBTL1Q9Y468 752 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 CHST2Q9Y4C5 530 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 DTNAQ9Y4J8 743 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 NCKAP5O14513 1909 aa7.54□□□□□ -1.2
SF1-218ENST00000489544 DSPPQ9NZW4 1301 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 A0A1B0GTH9 108 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 A0A1W2PQD3 144 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 TMEM247A6NEH6 219 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 B2RBV5 119 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 ACOT7O00154 380 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 GTPBP1O00178 669 aaKnown RBP7.53□□□□□ -1.2
SF1-218ENST00000489544 FRS3O43559 492 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 TPST1O60507 370 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 ADAM11O75078 769 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 OPN1SWP03999 348 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 ENDOUP21128 410 aaKnown RBP7.53□□□□□ -1.2
SF1-218ENST00000489544 RPS4Y1P22090 263 aaKnown RBP7.53□□□□□ -1.2
SF1-218ENST00000489544 ELAVL4P26378 380 aaKnown RBP7.53□□□□□ -1.2
SF1-218ENST00000489544 DPP4P27487 766 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 LCN1P31025 176 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 MSX2P35548 267 aaPredicted RBP7.53□□□□□ -1.2
SF1-218ENST00000489544 CPOXP36551 454 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 CLK3P49761 638 aaKnown RBP7.53□□□□□ -1.2
SF1-218ENST00000489544 GSK3BP49841 420 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 CCR4P51679 360 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 MXRA7P84157 204 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 LIPEQ05469 1076 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 C17orf67Q0P5P2 114 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 FGFBP1Q14512 234 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 SLC10A1Q14973 349 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 HYAL4Q2M3T9 481 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 VMACQ2NL98 169 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 GLIPR1L2Q4G1C9 344 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 REEP3Q6NUK4 255 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 HACD2Q6Y1H2 254 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 ZNF836Q6ZNA1 936 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 SERPINA11Q86U17 422 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 CHERPQ8IWX8 916 aaKnown RBP7.53□□□□□ -1.2
SF1-218ENST00000489544 CLIP4Q8N3C7 705 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 FAM109AQ8N4B1 249 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 TMCO5AQ8N6Q1 288 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 SMYD1Q8NB12 490 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 ZNF527Q8NB42 609 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 C11orf65Q8NCR3 313 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 FAM156AQ8NDB6 213 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 RBM15BQ8NDT2 890 aaKnown RBP7.53□□□□□ -1.2
SF1-218ENST00000489544 FAM83FQ8NEG4 500 aaPredicted RBP7.53□□□□□ -1.2
SF1-218ENST00000489544 OR52P1PQ8NH57 321 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 BBS10Q8TAM1 723 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 GPR137Q96N19 417 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 SH3GL1Q99961 368 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 HOPXQ9BPY8 73 aaPredicted RBP7.53□□□□□ -1.2
SF1-218ENST00000489544 WFDC6Q9BQY6 131 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 BCL2L10Q9HD36 194 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 POLE3Q9NRF9 147 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 AGPAT4Q9NRZ5 378 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 THUMPD1Q9NXG2 353 aaKnown RBP7.53□□□□□ -1.2
SF1-218ENST00000489544 SPRR3Q9UBC9 169 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 SEC14L3Q9UDX4 400 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 CORO2BQ9UQ03 480 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 VDAC3Q9Y277 283 aa7.53□□□□□ -1.2
SF1-218ENST00000489544 ZNF443Q9Y2A4 671 aaPredicted RBP7.53□□□□□ -1.2
SF1-218ENST00000489544 SHANK1Q9Y566 2161 aa7.52□□□□□ -1.21
SF1-218ENST00000489544 IGLV3-32A0A0A0MS00 114 aa7.52□□□□□ -1.21
SF1-218ENST00000489544 A0A0G2JPF8 293 aa7.52□□□□□ -1.21
SF1-218ENST00000489544 PRORSD1PA6NEY8 169 aa7.52□□□□□ -1.21
SF1-218ENST00000489544 FAM220BPB1ANY3 271 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms