RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 CORO7P57737 925 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 SPA17Q15506 151 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 ZNHIT3Q15649 155 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-233ENST00000489352 TBCCQ15814 346 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 ERCC6LQ2NKX8 1250 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 FBXO48Q5FWF7 155 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 CPTPQ5TA50 214 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 PRAMEF9Q5VWM5 478 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 VHLLQ6RSH7 139 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 SPATC1Q76KD6 591 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 NUDT13Q86X67 352 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 SLC44A2Q8IWA5 706 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-233ENST00000489352 LAS2Q8IYD9 372 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 RNF175Q8N4F7 328 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 KIR3DL3Q8N743 410 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 RNF138Q8WVD3 245 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 WFDC12Q8WWY7 111 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 GTF3AQ92664 365 aaKnown RBP10.03□□□□□ -0.8
HDAC6-233ENST00000489352 ZNF775Q96BV0 537 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-233ENST00000489352 LRRC58Q96CX6 371 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 RNF145Q96MT1 663 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 MTERF1Q99551 399 aaKnown RBP10.03□□□□□ -0.8
HDAC6-233ENST00000489352 CITED1Q99966 193 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 PLK3Q9H4B4 646 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 DDX31Q9H8H2 851 aaKnown RBP10.03□□□□□ -0.8
HDAC6-233ENST00000489352 FN3KRPQ9HA64 309 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 DYNLRB1Q9NP97 96 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 CA10Q9NS85 328 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 ZNF639Q9UID6 485 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 PSME2Q9UL46 239 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 MMP24Q9Y5R2 645 aa10.03□□□□□ -0.8
HDAC6-233ENST00000489352 SH3PXD2BA1X283 911 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 GJE1A6NN92 205 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 FADS1O60427 444 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 MPZL1O95297 269 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 AHSGP02765 367 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 ATP1B1P05026 303 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 CT45A8P0DMV1 189 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 CT45A9P0DMV2 189 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 MGAT2Q10469 447 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 CSTF3Q12996 717 aaKnown RBP10.02□□□□□ -0.81
HDAC6-233ENST00000489352 TSNQ15631 228 aaKnown RBP10.02□□□□□ -0.81
HDAC6-233ENST00000489352 BEAN1Q3B7T3 259 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 CT45A2Q5DJT8 189 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 ZNF628Q5EBL2 1059 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 SAXO2Q658L1 398 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 FAM45BPQ6NSW5 357 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 ACSM5Q6NUN0 579 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 SYT10Q6XYQ8 523 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 DOK3Q7L591 496 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 PEX26Q7Z412 305 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 MYLK4Q86YV6 388 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-233ENST00000489352 RELL1Q8IUW5 271 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 CCDC116Q8IYX3 515 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 TXLNBQ8N3L3 684 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 GTPBP8Q8N3Z3 284 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-233ENST00000489352 HUS1BQ8NHY5 278 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 FAM45AQ8TCE6 357 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 SLC9A6Q92581 669 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 TAF15Q92804 592 aaKnown RBP eCLIP10.02□□□□□ -0.81
HDAC6-233ENST00000489352 ESAMQ96AP7 390 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 GBP4Q96PP9 640 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 RSPO3Q9BXY4 272 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-233ENST00000489352 TMPRSS13Q9BYE2 586 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 C7orf69Q9H7B7 122 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 ANKZF1Q9H8Y5 726 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 SAYSD1Q9NPB0 183 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 G6PC2Q9NQR9 355 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 ASB6Q9NWX5 421 aa10.02□□□□□ -0.81
HDAC6-233ENST00000489352 MRTO4Q9UKD2 239 aaKnown RBP10.02□□□□□ -0.81
HDAC6-233ENST00000489352 TCRBV7S3A2A0A539 114 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 SLC22A31A6NKX4 558 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 G3V4G9 280 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 GOLGA6L19H0YKK7 550 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 TTC4O95801 387 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 ANGPTL1O95841 491 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 IGHV3-9P01782 118 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 CRYBA1P05813 215 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 PCSK2P16519 638 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 BSGP35613 385 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 PIK3CBP42338 1070 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 MRPS35P82673 323 aaKnown RBP10.01□□□□□ -0.81
HDAC6-233ENST00000489352 TGFBIQ15582 683 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 ADRM1Q16186 407 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 TAF9Q16594 264 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 ZNF362Q5T0B9 420 aaPredicted RBP10.01□□□□□ -0.81
HDAC6-233ENST00000489352 FBXW9Q5XUX1 488 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 RAD9BQ6WBX8 426 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 IKBIPQ70UQ0 350 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 GALNT5Q7Z7M9 940 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 ZCCHC24Q8N2G6 241 aaKnown RBP10.01□□□□□ -0.81
HDAC6-233ENST00000489352 RNF214Q8ND24 703 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 OR4F5Q8NH21 305 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 FBXO30Q8TB52 745 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 WWC2-AS2Q96NR7 200 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 MCMBPQ9BTE3 642 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 SRXN1Q9BYN0 137 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 KCNF1Q9H3M0 494 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 BCO1Q9HAY6 547 aa10.01□□□□□ -0.81
HDAC6-233ENST00000489352 PLAC1Q9HBJ0 212 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms