RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 IGFBPL1Q8WX77 278 aa16.48■□□□□ 0.23
HDAC6-231ENST00000488905 SH3YL1Q96HL8 342 aaPredicted RBP16.48■□□□□ 0.23
HDAC6-231ENST00000488905 TSSK3Q96PN8 268 aa16.48■□□□□ 0.23
HDAC6-231ENST00000488905 TMEM185BQ9H7F4 350 aa16.48■□□□□ 0.23
HDAC6-231ENST00000488905 FANCFQ9NPI8 374 aa16.48■□□□□ 0.23
HDAC6-231ENST00000488905 GLRX2Q9NS18 164 aa16.48■□□□□ 0.23
HDAC6-231ENST00000488905 ADAMDEC1O15204 470 aa16.47■□□□□ 0.23
HDAC6-231ENST00000488905 AKAP10O43572 662 aa16.47■□□□□ 0.23
HDAC6-231ENST00000488905 ME2P23368 584 aa16.47■□□□□ 0.23
HDAC6-231ENST00000488905 MANFP55145 182 aaKnown RBP16.47■□□□□ 0.23
HDAC6-231ENST00000488905 RPL38P63173 70 aaKnown RBP16.47■□□□□ 0.23
HDAC6-231ENST00000488905 DUSP5Q16690 384 aa16.47■□□□□ 0.23
HDAC6-231ENST00000488905 LIPMQ5VYY2 423 aa16.47■□□□□ 0.23
HDAC6-231ENST00000488905 RNF165Q6ZSG1 346 aa16.47■□□□□ 0.23
HDAC6-231ENST00000488905 BEND4Q6ZU67 534 aa16.47■□□□□ 0.23
HDAC6-231ENST00000488905 STK32CQ86UX6 486 aa16.47■□□□□ 0.23
HDAC6-231ENST00000488905 MISPQ8IVT2 679 aa16.47■□□□□ 0.23
HDAC6-231ENST00000488905 GSPT2Q8IYD1 628 aaKnown RBP16.47■□□□□ 0.23
HDAC6-231ENST00000488905 OR6Y1Q8NGX8 325 aa16.47■□□□□ 0.23
HDAC6-231ENST00000488905 OR2T11Q8NH01 316 aa16.47■□□□□ 0.23
HDAC6-231ENST00000488905 CLHC1Q8NHS4 586 aa16.47■□□□□ 0.23
HDAC6-231ENST00000488905 FAM110BQ8TC76 370 aa16.47■□□□□ 0.23
HDAC6-231ENST00000488905 ACTR6Q9GZN1 396 aa16.47■□□□□ 0.23
HDAC6-231ENST00000488905 C12orf65Q9H3J6 166 aaKnown RBP16.47■□□□□ 0.23
HDAC6-231ENST00000488905 ACSS1Q9NUB1 689 aaPredicted RBP16.47■□□□□ 0.23
HDAC6-231ENST00000488905 SH3BP4Q9P0V3 963 aa16.47■□□□□ 0.23
HDAC6-231ENST00000488905 SONP18583 2426 aaKnown RBP16.47■□□□□ 0.23
HDAC6-231ENST00000488905 CADP27708 2225 aa16.46■□□□□ 0.23
HDAC6-231ENST00000488905 SCDO00767 359 aa16.46■□□□□ 0.23
HDAC6-231ENST00000488905 AZIN1O14977 448 aa16.46■□□□□ 0.23
HDAC6-231ENST00000488905 OPN1LWP04000 364 aa16.46■□□□□ 0.23
HDAC6-231ENST00000488905 TUBBP07437 444 aa16.46■□□□□ 0.23
HDAC6-231ENST00000488905 CPA3P15088 417 aa16.46■□□□□ 0.23
HDAC6-231ENST00000488905 HPGDP15428 266 aa16.46■□□□□ 0.23
HDAC6-231ENST00000488905 PCSK6P29122 969 aa16.46■□□□□ 0.23
HDAC6-231ENST00000488905 AGTR1P30556 359 aa16.46■□□□□ 0.23
HDAC6-231ENST00000488905 LCN1P31025 176 aa16.46■□□□□ 0.23
HDAC6-231ENST00000488905 CRHR1P34998 444 aa16.46■□□□□ 0.23
HDAC6-231ENST00000488905 CCT5P48643 541 aa16.46■□□□□ 0.23
HDAC6-231ENST00000488905 CPTPQ5TA50 214 aa16.46■□□□□ 0.23
HDAC6-231ENST00000488905 HBMQ6B0K9 141 aa16.46■□□□□ 0.23
HDAC6-231ENST00000488905 Q6ZSR9 355 aa16.46■□□□□ 0.23
HDAC6-231ENST00000488905 CEP112Q8N8E3 955 aa16.46■□□□□ 0.23
HDAC6-231ENST00000488905 COX18Q8N8Q8 333 aa16.46■□□□□ 0.23
HDAC6-231ENST00000488905 POC1BQ8TC44 478 aa16.46■□□□□ 0.23
HDAC6-231ENST00000488905 TMEM171Q8WVE6 324 aa16.46■□□□□ 0.23
HDAC6-231ENST00000488905 OTUB1Q96FW1 271 aaPredicted RBP16.46■□□□□ 0.23
HDAC6-231ENST00000488905 PLPPR2Q96GM1 343 aa16.46■□□□□ 0.23
HDAC6-231ENST00000488905 KLHDC3Q9BQ90 382 aa16.46■□□□□ 0.23
HDAC6-231ENST00000488905 OR10A4Q9H209 315 aa16.46■□□□□ 0.23
HDAC6-231ENST00000488905 UBQLN4Q9NRR5 601 aa16.46■□□□□ 0.23
HDAC6-231ENST00000488905 FBXO34Q9NWN3 711 aa16.46■□□□□ 0.23
HDAC6-231ENST00000488905 FIS1Q9Y3D6 152 aa16.46■□□□□ 0.23
HDAC6-231ENST00000488905 CHD3Q12873 2000 aaKnown RBP16.45■□□□□ 0.22
HDAC6-231ENST00000488905 A0A0J9YW62 118 aa16.45■□□□□ 0.22
HDAC6-231ENST00000488905 A0A1W2PQD3 144 aa16.45■□□□□ 0.22
HDAC6-231ENST00000488905 COPEO14579 308 aa16.45■□□□□ 0.22
HDAC6-231ENST00000488905 LSM1O15116 133 aaKnown RBP16.45■□□□□ 0.22
HDAC6-231ENST00000488905 CNOT4O95628 575 aaKnown RBP16.45■□□□□ 0.22
HDAC6-231ENST00000488905 PLAUP00749 431 aa16.45■□□□□ 0.22
HDAC6-231ENST00000488905 ALOX5P09917 674 aa16.45■□□□□ 0.22
HDAC6-231ENST00000488905 PAX1P15863 534 aa16.45■□□□□ 0.22
HDAC6-231ENST00000488905 PSMB1P20618 241 aaKnown RBP16.45■□□□□ 0.22
HDAC6-231ENST00000488905 SERPINB4P48594 390 aa16.45■□□□□ 0.22
HDAC6-231ENST00000488905 PRIM2P49643 509 aa16.45■□□□□ 0.22
HDAC6-231ENST00000488905 CD226Q15762 336 aa16.45■□□□□ 0.22
HDAC6-231ENST00000488905 ZNF239Q16600 458 aaKnown RBP16.45■□□□□ 0.22
HDAC6-231ENST00000488905 RFTN2Q52LD8 501 aaPredicted RBP16.45■□□□□ 0.22
HDAC6-231ENST00000488905 EXOSC6Q5RKV6 272 aaKnown RBP16.45■□□□□ 0.22
HDAC6-231ENST00000488905 PDSS1Q5T2R2 415 aa16.45■□□□□ 0.22
HDAC6-231ENST00000488905 CCNJQ5T5M9 372 aa16.45■□□□□ 0.22
HDAC6-231ENST00000488905 ZCCHC12Q6PEW1 402 aa16.45■□□□□ 0.22
HDAC6-231ENST00000488905 PRIMA1Q86XR5 153 aa16.45■□□□□ 0.22
HDAC6-231ENST00000488905 WFDC8Q8IUA0 241 aa16.45■□□□□ 0.22
HDAC6-231ENST00000488905 JADE3Q92613 823 aa16.45■□□□□ 0.22
HDAC6-231ENST00000488905 C16orf58Q96GQ5 468 aa16.45■□□□□ 0.22
HDAC6-231ENST00000488905 KLHL15Q96M94 604 aa16.45■□□□□ 0.22
HDAC6-231ENST00000488905 RHOXF2Q9BQY4 288 aa16.45■□□□□ 0.22
HDAC6-231ENST00000488905 TMEM204Q9BSN7 226 aa16.45■□□□□ 0.22
HDAC6-231ENST00000488905 TUBB1Q9H4B7 451 aa16.45■□□□□ 0.22
HDAC6-231ENST00000488905 CXorf56Q9H5V9 222 aa16.45■□□□□ 0.22
HDAC6-231ENST00000488905 C12orf49Q9H741 205 aa16.45■□□□□ 0.22
HDAC6-231ENST00000488905 BAIAP2L1Q9UHR4 511 aa16.45■□□□□ 0.22
HDAC6-231ENST00000488905 TMED5Q9Y3A6 229 aa16.45■□□□□ 0.22
HDAC6-231ENST00000488905 CR1P17927 2039 aa16.45■□□□□ 0.22
HDAC6-231ENST00000488905 HS3ST1O14792 307 aa16.44■□□□□ 0.22
HDAC6-231ENST00000488905 TMCC2O75069 709 aa16.44■□□□□ 0.22
HDAC6-231ENST00000488905 HSPA4LO95757 839 aa16.44■□□□□ 0.22
HDAC6-231ENST00000488905 CHEK2O96017 543 aa16.44■□□□□ 0.22
HDAC6-231ENST00000488905 SHBGP04278 402 aa16.44■□□□□ 0.22
HDAC6-231ENST00000488905 LINGO3P0C6S8 592 aa16.44■□□□□ 0.22
HDAC6-231ENST00000488905 EFNA1P20827 205 aaPredicted RBP16.44■□□□□ 0.22
HDAC6-231ENST00000488905 ELK4P28324 431 aa16.44■□□□□ 0.22
HDAC6-231ENST00000488905 ASMTP46597 345 aa16.44■□□□□ 0.22
HDAC6-231ENST00000488905 ZNF844Q08AG5 666 aa16.44■□□□□ 0.22
HDAC6-231ENST00000488905 FOXF1Q12946 379 aa16.44■□□□□ 0.22
HDAC6-231ENST00000488905 PCLAFQ15004 111 aa16.44■□□□□ 0.22
HDAC6-231ENST00000488905 KANK2Q63ZY3 851 aa16.44■□□□□ 0.22
HDAC6-231ENST00000488905 TRABD2AQ86V40 505 aa16.44■□□□□ 0.22
HDAC6-231ENST00000488905 C10orf107Q8IVU9 208 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms