RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 NDUFB5O43674 189 aa10.07□□□□□ -0.8
RAB11FIP3-210ENST00000487899 ITM2AO43736 263 aa10.07□□□□□ -0.8
RAB11FIP3-210ENST00000487899 SMNDC1O75940 238 aaKnown RBP eCLIP10.07□□□□□ -0.8
RAB11FIP3-210ENST00000487899 C6orf47O95873 294 aa10.07□□□□□ -0.8
RAB11FIP3-210ENST00000487899 ALOX5P09917 674 aa10.07□□□□□ -0.8
RAB11FIP3-210ENST00000487899 LINGO3P0C6S8 592 aa10.07□□□□□ -0.8
RAB11FIP3-210ENST00000487899 NPIPA8P0DM63 369 aa10.07□□□□□ -0.8
RAB11FIP3-210ENST00000487899 NID1P14543 1247 aa10.07□□□□□ -0.8
RAB11FIP3-210ENST00000487899 LCN1P31025 176 aa10.07□□□□□ -0.8
RAB11FIP3-210ENST00000487899 RPL3P39023 403 aaKnown RBP10.07□□□□□ -0.8
RAB11FIP3-210ENST00000487899 SLC6A8P48029 635 aa10.07□□□□□ -0.8
RAB11FIP3-210ENST00000487899 PCYT1AP49585 367 aa10.07□□□□□ -0.8
RAB11FIP3-210ENST00000487899 POU6F2P78424 691 aaPredicted RBP10.07□□□□□ -0.8
RAB11FIP3-210ENST00000487899 TP53BP2Q13625 1128 aa10.07□□□□□ -0.8
RAB11FIP3-210ENST00000487899 IL23RQ5VWK5 629 aa10.07□□□□□ -0.8
RAB11FIP3-210ENST00000487899 CAMKMTQ7Z624 323 aa10.07□□□□□ -0.8
RAB11FIP3-210ENST00000487899 KRTAP1-3Q8IUG1 177 aa10.07□□□□□ -0.8
RAB11FIP3-210ENST00000487899 HOMEZQ8IX15 550 aa10.07□□□□□ -0.8
RAB11FIP3-210ENST00000487899 ZNF781Q8N8C0 355 aa10.07□□□□□ -0.8
RAB11FIP3-210ENST00000487899 SFXN5Q8TD22 340 aa10.07□□□□□ -0.8
RAB11FIP3-210ENST00000487899 COQ8BQ96D53 544 aa10.07□□□□□ -0.8
RAB11FIP3-210ENST00000487899 MBD6Q96DN6 1003 aa10.07□□□□□ -0.8
RAB11FIP3-210ENST00000487899 SH3YL1Q96HL8 342 aaPredicted RBP10.07□□□□□ -0.8
RAB11FIP3-210ENST00000487899 MARK4Q96L34 752 aa10.07□□□□□ -0.8
RAB11FIP3-210ENST00000487899 RNF145Q96MT1 663 aa10.07□□□□□ -0.8
RAB11FIP3-210ENST00000487899 TMUB1Q9BVT8 246 aa10.07□□□□□ -0.8
RAB11FIP3-210ENST00000487899 PIGUQ9H490 435 aa10.07□□□□□ -0.8
RAB11FIP3-210ENST00000487899 ZNF395Q9H8N7 513 aaPredicted RBP10.07□□□□□ -0.8
RAB11FIP3-210ENST00000487899 NEUROD4Q9HD90 331 aa10.07□□□□□ -0.8
RAB11FIP3-210ENST00000487899 GIN1Q9NXP7 522 aa10.07□□□□□ -0.8
RAB11FIP3-210ENST00000487899 A0A087WZY1 265 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 DEFB108AA8MXU0 73 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 EIF1AYO14602 144 aaKnown RBP10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 RAF1P04049 648 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 DHRS4L1P0CG22 281 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 CD8BP10966 210 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 G6PDP11413 515 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 FCGR2AP12318 317 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 IL11P20809 199 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 SHC1P29353 583 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 CD79BP40259 229 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 EIF1AXP47813 144 aaKnown RBP10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 RNF144AP50876 292 aaPredicted RBP10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 EEFSECP57772 596 aaKnown RBP10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 EEF1A1P68104 462 aaKnown RBP10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 HBA1P69905 142 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 FAM27E3Q08E93 113 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 FOXF1Q12946 379 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 PDCD2Q16342 344 aaPredicted RBP10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 KRT71Q3SY84 523 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 TNFAIP8L3Q5GJ75 292 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 DCST2Q5T1A1 773 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 CPTPQ5TA50 214 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 EEF1A1P5Q5VTE0 462 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 CBLN3Q6UW01 205 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 TGIF2LYQ8IUE0 185 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 MISPQ8IVT2 679 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 OR56A1Q8NGH5 318 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 OR5D16Q8NGK9 328 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 OR10D3Q8NH80 312 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 OR5AK3PQ8NH89 298 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 ACTRT2Q8TDY3 377 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 OR5P2Q8WZ92 322 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 ZBTB8AQ96BR9 441 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 ZNF524Q96C55 264 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 TUBGCP3Q96CW5 907 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 PGM2Q96G03 612 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 SORT1Q99523 831 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 ACTRT3Q9BYD9 372 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 BHLHE41Q9C0J9 482 aaPredicted RBP10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 TMEM185BQ9H7F4 350 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 SSU72Q9NP77 194 aaKnown RBP10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 DLL4Q9NR61 685 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 UBQLN4Q9NRR5 601 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 ATAD3AQ9NVI7 634 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 SNX8Q9Y5X2 465 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 KCNE3Q9Y6H6 103 aa10.06□□□□□ -0.8
RAB11FIP3-210ENST00000487899 CENPVL1A0A0U1RR11 272 aa10.05□□□□□ -0.8
RAB11FIP3-210ENST00000487899 SCDO00767 359 aa10.05□□□□□ -0.8
RAB11FIP3-210ENST00000487899 ADAMDEC1O15204 470 aa10.05□□□□□ -0.8
RAB11FIP3-210ENST00000487899 CTIFO43310 598 aaKnown RBP10.05□□□□□ -0.8
RAB11FIP3-210ENST00000487899 SS18L1O75177 396 aaPredicted RBP10.05□□□□□ -0.8
RAB11FIP3-210ENST00000487899 HSPA4LO95757 839 aa10.05□□□□□ -0.8
RAB11FIP3-210ENST00000487899 SERPINE1P05121 402 aa10.05□□□□□ -0.8
RAB11FIP3-210ENST00000487899 DDX5P17844 614 aaKnown RBP10.05□□□□□ -0.8
RAB11FIP3-210ENST00000487899 PRPS1L1P21108 318 aa10.05□□□□□ -0.8
RAB11FIP3-210ENST00000487899 DNASE1P24855 282 aa10.05□□□□□ -0.8
RAB11FIP3-210ENST00000487899 LOXP28300 417 aaPredicted RBP10.05□□□□□ -0.8
RAB11FIP3-210ENST00000487899 ELK4P28324 431 aa10.05□□□□□ -0.8
RAB11FIP3-210ENST00000487899 UGT2B10P36537 528 aa10.05□□□□□ -0.8
RAB11FIP3-210ENST00000487899 CCT3P49368 545 aaKnown RBP10.05□□□□□ -0.8
RAB11FIP3-210ENST00000487899 ZNF41P51814 821 aaPredicted RBP10.05□□□□□ -0.8
RAB11FIP3-210ENST00000487899 RPS26P62854 115 aaKnown RBP10.05□□□□□ -0.8
RAB11FIP3-210ENST00000487899 FOXD4Q12950 439 aaPredicted RBP10.05□□□□□ -0.8
RAB11FIP3-210ENST00000487899 MPP2Q14168 576 aa10.05□□□□□ -0.8
RAB11FIP3-210ENST00000487899 CHI3L2Q15782 390 aa10.05□□□□□ -0.8
RAB11FIP3-210ENST00000487899 NDUFAF6Q330K2 333 aa10.05□□□□□ -0.8
RAB11FIP3-210ENST00000487899 KLHL26Q53HC5 615 aa10.05□□□□□ -0.8
RAB11FIP3-210ENST00000487899 C22orf34Q6ZV56 151 aa10.05□□□□□ -0.8
RAB11FIP3-210ENST00000487899 FAM214BQ7L5A3 538 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms