RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 C10orf107Q8IVU9 208 aa10.29□□□□□ -0.76
TRIM56-204ENST00000487252 NXNL1Q96CM4 212 aa10.29□□□□□ -0.76
TRIM56-204ENST00000487252 F2RL3Q96RI0 385 aa10.29□□□□□ -0.76
TRIM56-204ENST00000487252 TBCDQ9BTW9 1192 aa10.29□□□□□ -0.76
TRIM56-204ENST00000487252 CXorf21Q9HAI6 301 aa10.29□□□□□ -0.76
TRIM56-204ENST00000487252 FOLH1BQ9HBA9 442 aa10.29□□□□□ -0.76
TRIM56-204ENST00000487252 FBXO6Q9NRD1 293 aaPredicted RBP10.29□□□□□ -0.76
TRIM56-204ENST00000487252 USP22Q9UPT9 525 aa10.29□□□□□ -0.76
TRIM56-204ENST00000487252 PCNX3Q9H6A9 2034 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 GPR75O95800 540 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 PLGP00747 810 aaPredicted RBP10.28□□□□□ -0.76
TRIM56-204ENST00000487252 AHSGP02765 367 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 SBK3P0C264 359 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 SLC35E2BP0CK96 405 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 EPHA1P21709 976 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 TCEA1P23193 301 aaKnown RBP10.28□□□□□ -0.76
TRIM56-204ENST00000487252 RGS4P49798 205 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 FABP6P51161 128 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 AQP5P55064 265 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 RPS3AP61247 264 aaKnown RBP10.28□□□□□ -0.76
TRIM56-204ENST00000487252 UBA52P62987 128 aaKnown RBP10.28□□□□□ -0.76
TRIM56-204ENST00000487252 SLBPQ14493 270 aaKnown RBP eCLIP10.28□□□□□ -0.76
TRIM56-204ENST00000487252 SWI5Q1ZZU3 235 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 ZNF470Q6ECI4 717 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 UGT2A3Q6UWM9 527 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 ZYG11AQ6WRX3 759 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 ZCCHC23Q6ZST2 131 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 SSX8Q7RTT4 187 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 GGNQ86UU5 652 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 DENND6AQ8IWF6 608 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 MYO1HQ8N1T3 1032 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 KISS1RQ969F8 398 aaPredicted RBP10.28□□□□□ -0.76
TRIM56-204ENST00000487252 OMA1Q96E52 524 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 GPR78Q96P69 363 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 SORCS2Q96PQ0 1159 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 BTBD10Q9BSF8 475 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 CCDC106Q9BWC9 280 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 NMUR2Q9GZQ4 415 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 OR10A5Q9H207 317 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 CCDC68Q9H2F9 335 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 NMRAL1Q9HBL8 299 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 OXSMQ9NWU1 459 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 MS4A12Q9NXJ0 267 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 ZNF490Q9ULM2 529 aaPredicted RBP10.28□□□□□ -0.76
TRIM56-204ENST00000487252 MGAT4BQ9UQ53 548 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 FKBP7Q9Y680 259 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 PMF1-BGLAPU3KQ54 211 aa10.28□□□□□ -0.76
TRIM56-204ENST00000487252 OR2M5A3KFT3 312 aa10.27□□□□□ -0.77
TRIM56-204ENST00000487252 ANKDD1BA6NHY2 528 aa10.27□□□□□ -0.77
TRIM56-204ENST00000487252 WASHC1A8K0Z3 465 aa10.27□□□□□ -0.77
TRIM56-204ENST00000487252 GSC2O15499 205 aa10.27□□□□□ -0.77
TRIM56-204ENST00000487252 TRIM13O60858 407 aa10.27□□□□□ -0.77
TRIM56-204ENST00000487252 LYPLA1O75608 230 aaPredicted RBP10.27□□□□□ -0.77
TRIM56-204ENST00000487252 CT62P0C5K7 136 aa10.27□□□□□ -0.77
TRIM56-204ENST00000487252 SLC35E2P0CK97 266 aa10.27□□□□□ -0.77
TRIM56-204ENST00000487252 GNAZP19086 355 aa10.27□□□□□ -0.77
TRIM56-204ENST00000487252 S1PR1P21453 382 aa10.27□□□□□ -0.77
TRIM56-204ENST00000487252 APEX1P27695 318 aaKnown RBP10.27□□□□□ -0.77
TRIM56-204ENST00000487252 CRABP2P29373 138 aa10.27□□□□□ -0.77
TRIM56-204ENST00000487252 TNFRSF17Q02223 184 aa10.27□□□□□ -0.77
TRIM56-204ENST00000487252 CHRNB3Q05901 458 aa10.27□□□□□ -0.77
TRIM56-204ENST00000487252 MAP4K2Q12851 820 aa10.27□□□□□ -0.77
TRIM56-204ENST00000487252 ITGADQ13349 1161 aa10.27□□□□□ -0.77
TRIM56-204ENST00000487252 PPA1Q15181 289 aa10.27□□□□□ -0.77
TRIM56-204ENST00000487252 MST1LQ2TV78 715 aa10.27□□□□□ -0.77
TRIM56-204ENST00000487252 OR5M10Q6IEU7 315 aa10.27□□□□□ -0.77
TRIM56-204ENST00000487252 PAQR3Q6TCH7 311 aa10.27□□□□□ -0.77
TRIM56-204ENST00000487252 MAVSQ7Z434 540 aa10.27□□□□□ -0.77
TRIM56-204ENST00000487252 TREML1Q86YW5 311 aa10.27□□□□□ -0.77
TRIM56-204ENST00000487252 WDR75Q8IWA0 830 aaKnown RBP10.27□□□□□ -0.77
TRIM56-204ENST00000487252 LMNTD2Q8IXW0 634 aa10.27□□□□□ -0.77
TRIM56-204ENST00000487252 FADS6Q8N9I5 356 aa10.27□□□□□ -0.77
TRIM56-204ENST00000487252 SRFBP1Q8NEF9 429 aaKnown RBP10.27□□□□□ -0.77
TRIM56-204ENST00000487252 SUCNR1Q9BXA5 334 aa10.27□□□□□ -0.77
TRIM56-204ENST00000487252 CADM1Q9BY67 442 aaKnown RBP10.27□□□□□ -0.77
TRIM56-204ENST00000487252 SAP130Q9H0E3 1048 aa10.27□□□□□ -0.77
TRIM56-204ENST00000487252 MMADHCQ9H3L0 296 aaPredicted RBP10.27□□□□□ -0.77
TRIM56-204ENST00000487252 CAB39LQ9H9S4 337 aa10.27□□□□□ -0.77
TRIM56-204ENST00000487252 BAIAP2L1Q9UHR4 511 aa10.27□□□□□ -0.77
TRIM56-204ENST00000487252 FBXO5Q9UKT4 447 aa10.27□□□□□ -0.77
TRIM56-204ENST00000487252 IKZF3Q9UKT9 509 aa10.27□□□□□ -0.77
TRIM56-204ENST00000487252 AP4B1Q9Y6B7 739 aa10.27□□□□□ -0.77
TRIM56-204ENST00000487252 FAM95CA0A1B0GW59 222 aa10.26□□□□□ -0.77
TRIM56-204ENST00000487252 PABPN1LA6NDY0 278 aaKnown RBP10.26□□□□□ -0.77
TRIM56-204ENST00000487252 OR6C70A6NIJ9 312 aa10.26□□□□□ -0.77
TRIM56-204ENST00000487252 RTCAO00442 366 aaKnown RBP10.26□□□□□ -0.77
TRIM56-204ENST00000487252 PRKRAO75569 313 aaKnown RBP10.26□□□□□ -0.77
TRIM56-204ENST00000487252 WISP3O95389 354 aaPredicted RBP10.26□□□□□ -0.77
TRIM56-204ENST00000487252 GUCA1CO95843 209 aa10.26□□□□□ -0.77
TRIM56-204ENST00000487252 ENO2P09104 434 aaPredicted RBP10.26□□□□□ -0.77
TRIM56-204ENST00000487252 GCH1P30793 250 aa10.26□□□□□ -0.77
TRIM56-204ENST00000487252 SLC1A2P43004 574 aa10.26□□□□□ -0.77
TRIM56-204ENST00000487252 IDH3AP50213 366 aa10.26□□□□□ -0.77
TRIM56-204ENST00000487252 MNAT1P51948 309 aa10.26□□□□□ -0.77
TRIM56-204ENST00000487252 RAB10P61026 200 aa10.26□□□□□ -0.77
TRIM56-204ENST00000487252 POU4F1Q01851 419 aa10.26□□□□□ -0.77
TRIM56-204ENST00000487252 SPOCK1Q08629 439 aa10.26□□□□□ -0.77
TRIM56-204ENST00000487252 THOC5Q13769 683 aaKnown RBP10.26□□□□□ -0.77
TRIM56-204ENST00000487252 SGCBQ16585 318 aa10.26□□□□□ -0.77
TRIM56-204ENST00000487252 RAET1LQ5VY80 246 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms