RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 ZNF860A6NHJ4 632 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 SAGE2PA6NJ88 616 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 NPIPB11E5RHQ5 1161 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 TFECO14948 347 aaPredicted RBP3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 NDUFS4O43181 175 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 ZNHIT1O43257 154 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 OR1F1O43749 312 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 HS6ST1O60243 411 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 KLK8O60259 260 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 CEP104O60308 925 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 B4GALT2O60909 372 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 DNAJB6O75190 326 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 HIST1H2AGP0C0S8 130 aaPredicted RBP3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 SMIM10L1P0DMW3 83 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 CDH1P12830 882 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 RNH1P13489 461 aaKnown RBP3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 CD99P14209 185 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 HOXB9P17482 250 aaPredicted RBP3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 HIST1H2ADP20671 130 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 AHRP35869 848 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 KCNJ1P48048 391 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 RGS4P49798 205 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 CCR8P51685 355 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 GPR143P51810 404 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 AP1S2P56377 157 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 BTG2P78543 158 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 RGS1Q08116 209 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 ARL16Q0P5N6 197 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 NAE1Q13564 534 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 SF3B4Q15427 424 aaKnown RBP eCLIP3.63□□□□□ -1.832e-20■■■■■ 37.9
SNRNP40-205ENST00000486941 GXYLT1Q4G148 440 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 DEFB134Q4QY38 66 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 CMPK2Q5EBM0 449 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 DUPD1Q68J44 220 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 CASC4Q6P4E1 433 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 RGS9BPQ6ZS82 235 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 ABHD13Q7L211 337 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 PIWIL4Q7Z3Z4 852 aaKnown RBP3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 TGIF2LYQ8IUE0 185 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 DENND6AQ8IWF6 608 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 GPALPP1Q8IXQ4 340 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 CPNE9Q8IYJ1 553 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 CLYBLQ8N0X4 340 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 CYP4Z2PQ8N1L4 340 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 KIF2BQ8N4N8 673 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 TMEM156Q8N614 296 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 GPATCH11Q8N954 259 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 TEX45Q8NA69 505 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 ZNF114Q8NC26 417 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 APCDD1LQ8NCL9 501 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 ZNF740Q8NDX6 193 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 CHDHQ8NE62 594 aaPredicted RBP3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 MCUQ8NE86 351 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 TRPV3Q8NET8 790 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 B3GNT7Q8NFL0 401 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 MYRIPQ8NFW9 859 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 NT5CQ8TCD5 201 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 UTP15Q8TED0 518 aaKnown RBP3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 EEF1AKMT1Q8WVE0 214 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 SNF8Q96H20 258 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 SMIM10Q96HG1 83 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 DUX5Q96PT3 197 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 FOXC2Q99958 501 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 ZNF559Q9BR84 538 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 SLC25A33Q9BSK2 321 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 DESI2Q9BSY9 194 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 H2AFJQ9BTM1 129 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 UCK2Q9BZX2 261 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 ATG10Q9H0Y0 220 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 CXXC4Q9H2H0 198 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 XAB2Q9HCS7 855 aaKnown RBP3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 SEPSECSQ9HD40 501 aaKnown RBP3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 FBXO6Q9NRD1 293 aaPredicted RBP3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 TAS2R13Q9NYV9 303 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 IL36RNQ9UBH0 155 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 TRMT6Q9UJA5 497 aaKnown RBP3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 FBXO5Q9UKT4 447 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 GUCA1BQ9UMX6 200 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 YARS2Q9Y2Z4 477 aaKnown RBP3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 ADAM18Q9Y3Q7 739 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 RTTNQ86VV8 2226 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 JMJD1CQ15652 2540 aa3.63□□□□□ -1.83
SNRNP40-205ENST00000486941 NCKAP5O14513 1909 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 TLN2Q9Y4G6 2542 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 A0A1B0GVC2 190 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 NKX2-6A6NCS4 301 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 SYNDIG1LA6NDD5 238 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 PABPN1LA6NDY0 278 aaKnown RBP3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 NPIPB13A6NJU9 1138 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 AQP12BA6NM10 295 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 NPIPB5A8MRT5 1133 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 C17orf100A8MU93 164 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 NPIPB4C9JG80 1138 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 PSMD12O00232 456 aaPredicted RBP3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 BCKDKO14874 412 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 CDC40O60508 579 aaKnown RBP eCLIP3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 FAM155BO75949 473 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 ZFAND5O76080 213 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 PDE9AO76083 593 aa3.62□□□□□ -1.83
SNRNP40-205ENST00000486941 ZWINTO95229 277 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms