RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 G3V3Y1 287 aa11.69□□□□□ -0.54
HDAC6-229ENST00000486665 CDK2AP1O14519 115 aa11.69□□□□□ -0.54
HDAC6-229ENST00000486665 TP53I11O14683 189 aa11.69□□□□□ -0.54
HDAC6-229ENST00000486665 BCAS1O75363 584 aaPredicted RBP11.69□□□□□ -0.54
HDAC6-229ENST00000486665 SERPINA1P01009 418 aa11.69□□□□□ -0.54
HDAC6-229ENST00000486665 DBIP07108 87 aaKnown RBP11.69□□□□□ -0.54
HDAC6-229ENST00000486665 NGFRP08138 427 aa11.69□□□□□ -0.54
HDAC6-229ENST00000486665 PABPC4LP0CB38 370 aaKnown RBP11.69□□□□□ -0.54
HDAC6-229ENST00000486665 CD247P20963 164 aa11.69□□□□□ -0.54
HDAC6-229ENST00000486665 EVI2BP34910 448 aa11.69□□□□□ -0.54
HDAC6-229ENST00000486665 CASP3P42574 277 aa11.69□□□□□ -0.54
HDAC6-229ENST00000486665 CD97P48960 835 aa11.69□□□□□ -0.54
HDAC6-229ENST00000486665 ARG2P78540 354 aa11.69□□□□□ -0.54
HDAC6-229ENST00000486665 TRAP1Q12931 704 aaKnown RBP11.69□□□□□ -0.54
HDAC6-229ENST00000486665 DUSP7Q16829 419 aa11.69□□□□□ -0.54
HDAC6-229ENST00000486665 GLIPR1L2Q4G1C9 344 aa11.69□□□□□ -0.54
HDAC6-229ENST00000486665 LRRC23Q53EV4 343 aaPredicted RBP11.69□□□□□ -0.54
HDAC6-229ENST00000486665 SLC22A10Q63ZE4 541 aa11.69□□□□□ -0.54
HDAC6-229ENST00000486665 ZNF771Q7L3S4 317 aaPredicted RBP11.69□□□□□ -0.54
HDAC6-229ENST00000486665 COMTD1Q86VU5 262 aa11.69□□□□□ -0.54
HDAC6-229ENST00000486665 PEX5LQ8IYB4 626 aa11.69□□□□□ -0.54
HDAC6-229ENST00000486665 CLIP4Q8N3C7 705 aa11.69□□□□□ -0.54
HDAC6-229ENST00000486665 GATSQ8NAP1 163 aa11.69□□□□□ -0.54
HDAC6-229ENST00000486665 SMYD1Q8NB12 490 aa11.69□□□□□ -0.54
HDAC6-229ENST00000486665 MDS2Q8NDY4 140 aa11.69□□□□□ -0.54
HDAC6-229ENST00000486665 GPR32P1Q8NGA4 272 aa11.69□□□□□ -0.54
HDAC6-229ENST00000486665 FAM162AQ96A26 154 aa11.69□□□□□ -0.54
HDAC6-229ENST00000486665 ASB9Q96DX5 294 aa11.69□□□□□ -0.54
HDAC6-229ENST00000486665 ZNF607Q96SK3 696 aa11.69□□□□□ -0.54
HDAC6-229ENST00000486665 RNF32Q9H0A6 362 aa11.69□□□□□ -0.54
HDAC6-229ENST00000486665 ACTR3BQ9P1U1 418 aa11.69□□□□□ -0.54
HDAC6-229ENST00000486665 MAGEL2Q9UJ55 1249 aa11.69□□□□□ -0.54
HDAC6-229ENST00000486665 ZNF443Q9Y2A4 671 aaPredicted RBP11.69□□□□□ -0.54
HDAC6-229ENST00000486665 DTNAQ9Y4J8 743 aa11.69□□□□□ -0.54
HDAC6-229ENST00000486665 NOTCH2Q04721 2471 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 SHANK1Q9Y566 2161 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 A0A0G2JMM0 328 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 A0A1W2PPB8 328 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 A0A1W2PRS3 328 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 PRAMEF25A6NGN4 478 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 SERINC4A6NH21 518 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 KIR3DP1A8MWS1 328 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 ALG1L2C9J202 215 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 MKRN2OSH3BPM6 223 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 SCDO00767 359 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 OIP5O43482 229 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 SCO2O43819 266 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 GMNNO75496 209 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 SERPINB7O75635 380 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 PDE9AO76083 593 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 EPPINO95925 133 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 RNF224P0DH78 156 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 TNFSF10P50591 281 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 EEF1A1P68104 462 aaKnown RBP11.68□□□□□ -0.54
HDAC6-229ENST00000486665 PLAURQ03405 335 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 KLRB1Q12918 225 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 FGFBP1Q14512 234 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 CD226Q15762 336 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 CYBRD1Q53TN4 286 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 ZNF311Q5JNZ3 666 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 PRAMEF20Q5VT98 475 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 FNDC7Q5VTL7 733 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 ZNF836Q6ZNA1 936 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 CBLL1Q75N03 491 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 DHFR2Q86XF0 187 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 KRT73Q86Y46 540 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 ARMC8Q8IUR7 673 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 FAM26EQ8N5C1 309 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 ZNF614Q8N883 585 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 GOLM1Q8NBJ4 401 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 WDR60Q8WVS4 1066 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 NSMCE2Q96MF7 247 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 SECISBP2Q96T21 854 aaKnown RBP11.68□□□□□ -0.54
HDAC6-229ENST00000486665 WFDC6Q9BQY6 131 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 ANGPTL4Q9BY76 406 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.68□□□□□ -0.54
HDAC6-229ENST00000486665 METTL7AQ9H8H3 244 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 GALNT9Q9HCQ5 603 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.68□□□□□ -0.54
HDAC6-229ENST00000486665 DCAF13Q9NV06 445 aaKnown RBP11.68□□□□□ -0.54
HDAC6-229ENST00000486665 RLIMQ9NVW2 624 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 SEC14L3Q9UDX4 400 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 ZNF232Q9UNY5 417 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 HRH3Q9Y5N1 445 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 CPAMD8Q8IZJ3 1885 aa11.68□□□□□ -0.54
HDAC6-229ENST00000486665 TCRBV5S2A0A599 114 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 B4DXG7 233 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 SLC25A12O75746 678 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 ANGPTL1O95841 491 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 THBS1P07996 1170 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 SP1P08047 785 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 NID1P14543 1247 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 HPGDP15428 266 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 IL7RP16871 459 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 KCNJ5P48544 419 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 ERFP50548 548 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 RPP38P78345 283 aaKnown RBP11.67□□□□□ -0.54
HDAC6-229ENST00000486665 KCNJ10P78508 379 aa11.67□□□□□ -0.54
HDAC6-229ENST00000486665 INPP5JQ15735 1006 aaPredicted RBP11.67□□□□□ -0.54
HDAC6-229ENST00000486665 NDUFAF6Q330K2 333 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms