RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 IL11P20809 199 aa17.21■□□□□ 0.35
COL27A1-205ENST00000485397 FRKP42685 505 aaPredicted RBP17.21■□□□□ 0.35
COL27A1-205ENST00000485397 RAC1P63000 192 aa17.21■□□□□ 0.35
COL27A1-205ENST00000485397 RPL38P63173 70 aaKnown RBP17.21■□□□□ 0.35
COL27A1-205ENST00000485397 PDE7AQ13946 482 aa17.21■□□□□ 0.35
COL27A1-205ENST00000485397 BEX5Q5H9J7 111 aa17.21■□□□□ 0.35
COL27A1-205ENST00000485397 CCNJQ5T5M9 372 aa17.21■□□□□ 0.35
COL27A1-205ENST00000485397 CPTPQ5TA50 214 aa17.21■□□□□ 0.35
COL27A1-205ENST00000485397 C10orf107Q8IVU9 208 aa17.21■□□□□ 0.35
COL27A1-205ENST00000485397 OR6Y1Q8NGX8 325 aa17.21■□□□□ 0.35
COL27A1-205ENST00000485397 ZBTB8AQ96BR9 441 aa17.21■□□□□ 0.35
COL27A1-205ENST00000485397 MS4A4EQ96PG1 132 aa17.21■□□□□ 0.35
COL27A1-205ENST00000485397 BDH2Q9BUT1 245 aa17.21■□□□□ 0.35
COL27A1-205ENST00000485397 IQCGQ9H095 443 aaKnown RBP17.21■□□□□ 0.35
COL27A1-205ENST00000485397 RAI1Q7Z5J4 1906 aaPredicted RBP17.21■□□□□ 0.35
COL27A1-205ENST00000485397 ADAMDEC1O15204 470 aa17.2■□□□□ 0.34
COL27A1-205ENST00000485397 SYNGR4O95473 234 aa17.2■□□□□ 0.34
COL27A1-205ENST00000485397 ALOX5P09917 674 aa17.2■□□□□ 0.34
COL27A1-205ENST00000485397 ZNF41P51814 821 aaPredicted RBP17.2■□□□□ 0.34
COL27A1-205ENST00000485397 CD226Q15762 336 aa17.2■□□□□ 0.34
COL27A1-205ENST00000485397 EXOSC6Q5RKV6 272 aaKnown RBP17.2■□□□□ 0.34
COL27A1-205ENST00000485397 PLEKHM3Q6ZWE6 761 aa17.2■□□□□ 0.34
COL27A1-205ENST00000485397 C4orf33Q8N1A6 199 aa17.2■□□□□ 0.34
COL27A1-205ENST00000485397 COX18Q8N8Q8 333 aa17.2■□□□□ 0.34
COL27A1-205ENST00000485397 KIF18AQ8NI77 898 aa17.2■□□□□ 0.34
COL27A1-205ENST00000485397 ACTRT2Q8TDY3 377 aa17.2■□□□□ 0.34
COL27A1-205ENST00000485397 ACSS1Q9NUB1 689 aaPredicted RBP17.2■□□□□ 0.34
COL27A1-205ENST00000485397 PAQR5Q9NXK6 330 aaPredicted RBP17.2■□□□□ 0.34
COL27A1-205ENST00000485397 C7orf72A4D263 438 aa17.19■□□□□ 0.34
COL27A1-205ENST00000485397 LSM1O15116 133 aaKnown RBP17.19■□□□□ 0.34
COL27A1-205ENST00000485397 NEFHP12036 1026 aa17.19■□□□□ 0.34
COL27A1-205ENST00000485397 HPGDP15428 266 aa17.19■□□□□ 0.34
COL27A1-205ENST00000485397 PPP3CBP16298 524 aa17.19■□□□□ 0.34
COL27A1-205ENST00000485397 KRT4P19013 534 aa17.19■□□□□ 0.34
COL27A1-205ENST00000485397 SHC1P29353 583 aa17.19■□□□□ 0.34
COL27A1-205ENST00000485397 PTH2RP49190 550 aa17.19■□□□□ 0.34
COL27A1-205ENST00000485397 PCLAFQ15004 111 aa17.19■□□□□ 0.34
COL27A1-205ENST00000485397 GALNTL6Q49A17 601 aa17.19■□□□□ 0.34
COL27A1-205ENST00000485397 HBMQ6B0K9 141 aa17.19■□□□□ 0.34
COL27A1-205ENST00000485397 ZNF704Q6ZNC4 412 aaPredicted RBP17.19■□□□□ 0.34
COL27A1-205ENST00000485397 ESPNLQ6ZVH7 1005 aa17.19■□□□□ 0.34
COL27A1-205ENST00000485397 WFDC8Q8IUA0 241 aa17.19■□□□□ 0.34
COL27A1-205ENST00000485397 LRRN4CLQ8ND94 238 aa17.19■□□□□ 0.34
COL27A1-205ENST00000485397 B4GALNT2Q8NHY0 566 aa17.19■□□□□ 0.34
COL27A1-205ENST00000485397 EPS8L3Q8TE67 593 aaKnown RBP17.19■□□□□ 0.34
COL27A1-205ENST00000485397 NUDT8Q8WV74 236 aa17.19■□□□□ 0.34
COL27A1-205ENST00000485397 UBLCP1Q8WVY7 318 aaPredicted RBP17.19■□□□□ 0.34
COL27A1-205ENST00000485397 IGFBPL1Q8WX77 278 aa17.19■□□□□ 0.34
COL27A1-205ENST00000485397 ROBO4Q8WZ75 1007 aa17.19■□□□□ 0.34
COL27A1-205ENST00000485397 JADE3Q92613 823 aa17.19■□□□□ 0.34
COL27A1-205ENST00000485397 OSTF1Q92882 214 aa17.19■□□□□ 0.34
COL27A1-205ENST00000485397 FAM120BQ96EK7 910 aaKnown RBP17.19■□□□□ 0.34
COL27A1-205ENST00000485397 GSX2Q9BZM3 304 aa17.19■□□□□ 0.34
COL27A1-205ENST00000485397 C12orf49Q9H741 205 aa17.19■□□□□ 0.34
COL27A1-205ENST00000485397 HHATLQ9HCP6 504 aa17.19■□□□□ 0.34
COL27A1-205ENST00000485397 UBQLN4Q9NRR5 601 aa17.19■□□□□ 0.34
COL27A1-205ENST00000485397 SIRT3Q9NTG7 399 aaPredicted RBP17.19■□□□□ 0.34
COL27A1-205ENST00000485397 DNAJC15Q9Y5T4 150 aa17.19■□□□□ 0.34
COL27A1-205ENST00000485397 PRR14LQ5THK1 2151 aa17.18■□□□□ 0.34
COL27A1-205ENST00000485397 TMEM233B4DJY2 109 aa17.18■□□□□ 0.34
COL27A1-205ENST00000485397 KIF2AO00139 706 aaPredicted RBP17.18■□□□□ 0.34
COL27A1-205ENST00000485397 SCDO00767 359 aa17.18■□□□□ 0.34
COL27A1-205ENST00000485397 BCKDHAP12694 445 aa17.18■□□□□ 0.34
COL27A1-205ENST00000485397 PCSK6P29122 969 aa17.18■□□□□ 0.34
COL27A1-205ENST00000485397 PRIM2P49643 509 aa17.18■□□□□ 0.34
COL27A1-205ENST00000485397 RNF144AP50876 292 aaPredicted RBP17.18■□□□□ 0.34
COL27A1-205ENST00000485397 POU6F2P78424 691 aaPredicted RBP17.18■□□□□ 0.34
COL27A1-205ENST00000485397 KANK2Q63ZY3 851 aa17.18■□□□□ 0.34
COL27A1-205ENST00000485397 ZCCHC12Q6PEW1 402 aa17.18■□□□□ 0.34
COL27A1-205ENST00000485397 RNF165Q6ZSG1 346 aa17.18■□□□□ 0.34
COL27A1-205ENST00000485397 BEND4Q6ZU67 534 aa17.18■□□□□ 0.34
COL27A1-205ENST00000485397 TDRPQ86YL5 185 aa17.18■□□□□ 0.34
COL27A1-205ENST00000485397 MISPQ8IVT2 679 aa17.18■□□□□ 0.34
COL27A1-205ENST00000485397 PLPPR2Q96GM1 343 aa17.18■□□□□ 0.34
COL27A1-205ENST00000485397 KLHL15Q96M94 604 aa17.18■□□□□ 0.34
COL27A1-205ENST00000485397 ACTR6Q9GZN1 396 aa17.18■□□□□ 0.34
COL27A1-205ENST00000485397 GLRX2Q9NS18 164 aa17.18■□□□□ 0.34
COL27A1-205ENST00000485397 ZCCHC3Q9NUD5 404 aaKnown RBP17.18■□□□□ 0.34
COL27A1-205ENST00000485397 GIMAP2Q9UG22 337 aa17.18■□□□□ 0.34
COL27A1-205ENST00000485397 NSD1Q96L73 2696 aaPredicted RBP17.17■□□□□ 0.34
COL27A1-205ENST00000485397 NPIPA5A0A0B4J1W7 369 aa17.17■□□□□ 0.34
COL27A1-205ENST00000485397 A0A1W2PQD3 144 aa17.17■□□□□ 0.34
COL27A1-205ENST00000485397 NPIPA7E9PJI5 369 aa17.17■□□□□ 0.34
COL27A1-205ENST00000485397 OIP5O43482 229 aa17.17■□□□□ 0.34
COL27A1-205ENST00000485397 TRIM13O60858 407 aa17.17■□□□□ 0.34
COL27A1-205ENST00000485397 HMGN2P05204 90 aaKnown RBP17.17■□□□□ 0.34
COL27A1-205ENST00000485397 CHRNGP07510 517 aa17.17■□□□□ 0.34
COL27A1-205ENST00000485397 LINGO3P0C6S8 592 aa17.17■□□□□ 0.34
COL27A1-205ENST00000485397 NPIPA8P0DM63 369 aa17.17■□□□□ 0.34
COL27A1-205ENST00000485397 ME2P23368 584 aa17.17■□□□□ 0.34
COL27A1-205ENST00000485397 AGTR1P30556 359 aa17.17■□□□□ 0.34
COL27A1-205ENST00000485397 LCN1P31025 176 aa17.17■□□□□ 0.34
COL27A1-205ENST00000485397 SFTPDP35247 375 aa17.17■□□□□ 0.34
COL27A1-205ENST00000485397 SERPINB4P48594 390 aa17.17■□□□□ 0.34
COL27A1-205ENST00000485397 CARD18P57730 90 aa17.17■□□□□ 0.34
COL27A1-205ENST00000485397 FOXF1Q12946 379 aa17.17■□□□□ 0.34
COL27A1-205ENST00000485397 LASP1Q14847 261 aaKnown RBP17.17■□□□□ 0.34
COL27A1-205ENST00000485397 PDSS1Q5T2R2 415 aa17.17■□□□□ 0.34
COL27A1-205ENST00000485397 TRABD2AQ86V40 505 aa17.17■□□□□ 0.34
COL27A1-205ENST00000485397 DDIASQ8IXT1 998 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms