RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-223	ENST00000479656	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	10.3	□□□□□ -0.76
APTX-223	ENST00000479656		H0YJX3	145 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	SCD	O00767	359 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	HS6ST1	O60243	411 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	PPM1B	O75688	479 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	OR2J2	O76002	312 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	CSTA	P01040	98 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	UBTFL6	P0CB48	400 aa	Predicted RBP	10.3	□□□□□ -0.76
APTX-223	ENST00000479656	ST13	P50502	369 aa	Known RBP	10.3	□□□□□ -0.76
APTX-223	ENST00000479656	DAP	P51397	102 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	TAS2R41	P59536	307 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	PPP2R2B	Q00005	443 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	CD226	Q15762	336 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	MICA	Q29983	383 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	FGD3	Q5JSP0	725 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	C6orf52	Q5T4I8	152 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	GRAMD2A	Q8IUY3	354 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	ZNF527	Q8NB42	609 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	PIK3C3	Q8NEB9	887 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	PHOSPHO1	Q8TCT1	267 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	ADAMTS16	Q8TE57	1224 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	GIPC3	Q8TF64	312 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	NACC2	Q96BF6	587 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	RBM4B	Q9BQ04	359 aa	Known RBP	10.3	□□□□□ -0.76
APTX-223	ENST00000479656	RBM4	Q9BWF3	364 aa	Known RBP	10.3	□□□□□ -0.76
APTX-223	ENST00000479656	RTN4R	Q9BZR6	473 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	DNAJB12	Q9NXW2	375 aa	Known RBP	10.3	□□□□□ -0.76
APTX-223	ENST00000479656	FBXL4	Q9UKA2	621 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	PCDHGA6	Q9Y5G7	932 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	TRBV4-1	A0A0J9YWV2	114 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	OR6C70	A6NIJ9	312 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	ADAM11	O75078	769 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	SNAP29	O95721	258 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	THY1	P04216	161 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	ITGAM	P11215	1152 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	UQCRB	P14927	111 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	LCN1	P31025	176 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	FBXW4	P57775	412 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	SMIM11A	P58511	58 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	PSPH	P78330	225 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656		Q0VFX4	171 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	CAMK2B	Q13554	666 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	ZIK1	Q3SY52	487 aa	Predicted RBP	10.3	□□□□□ -0.76
APTX-223	ENST00000479656	NHSL2	Q5HYW2	709 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	DCST1	Q5T197	706 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	FCRLB	Q6BAA4	426 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	PLEKHM3	Q6ZWE6	761 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	MARCH3	Q86UD3	253 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	RANBP3L	Q86VV4	465 aa	Predicted RBP	10.3	□□□□□ -0.76
APTX-223	ENST00000479656	CMIP	Q8IY22	773 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	DHRS1	Q96LJ7	313 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	GABARAPL1	Q9H0R8	117 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	CDCP1	Q9H5V8	836 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	USE1	Q9NZ43	259 aa		10.3	□□□□□ -0.76
APTX-223	ENST00000479656	GTPBP1	O00178	669 aa	Known RBP	10.29	□□□□□ -0.76
APTX-223	ENST00000479656	MAN1A2	O60476	641 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	MITF	O75030	526 aa	Predicted RBP	10.29	□□□□□ -0.76
APTX-223	ENST00000479656	ITGA10	O75578	1167 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	CCNB2	O95067	398 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	HP	P00738	406 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	ICAM2	P13598	275 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	ELAVL4	P26378	380 aa	Known RBP	10.29	□□□□□ -0.76
APTX-223	ENST00000479656	HTR2A	P28223	471 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	RYK	P34925	604 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	ADH7	P40394	386 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	ACAA2	P42765	397 aa	Known RBP	10.29	□□□□□ -0.76
APTX-223	ENST00000479656	IL1RL1	Q01638	556 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	SEC23B	Q15437	767 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	OR1Q1	Q15612	314 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	ZSWIM7	Q19AV6	140 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	FNDC7	Q5VTL7	733 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	PODNL1	Q6PEZ8	512 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	IGF2-AS	Q6U949	168 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	LYPD8	Q6UX82	237 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	LSR	Q86X29	649 aa	Predicted RBP	10.29	□□□□□ -0.76
APTX-223	ENST00000479656	SLC5A8	Q8N695	610 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	ATG16L2	Q8NAA4	619 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	POGLUT1	Q8NBL1	392 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	OR10G2	Q8NGC3	310 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	OR9Q2	Q8NGE9	314 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	SLC7A13	Q8TCU3	470 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	SLC41A3	Q96GZ6	507 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	NODAL	Q96S42	347 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	RASL10B	Q96S79	203 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	FEV	Q99581	238 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	FAM117A	Q9C073	453 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	GPN2	Q9H9Y4	310 aa	Predicted RBP	10.29	□□□□□ -0.76
APTX-223	ENST00000479656	MAN2C1	Q9NTJ4	1040 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	SMPD3	Q9NY59	655 aa	Predicted RBP	10.29	□□□□□ -0.76
APTX-223	ENST00000479656	TMEFF2	Q9UIK5	374 aa	Predicted RBP	10.29	□□□□□ -0.76
APTX-223	ENST00000479656	TMCC3	Q9ULS5	477 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	SLC35A3	Q9Y2D2	325 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	CARD8	Q9Y2G2	431 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656	AP4B1	Q9Y6B7	739 aa		10.29	□□□□□ -0.76
APTX-223	ENST00000479656		A0A1W2PRQ8	180 aa		10.28	□□□□□ -0.76
APTX-223	ENST00000479656	C17orf51	A8MQB3	221 aa		10.28	□□□□□ -0.76
APTX-223	ENST00000479656	OIP5	O43482	229 aa		10.28	□□□□□ -0.76
APTX-223	ENST00000479656	FADS1	O60427	444 aa		10.28	□□□□□ -0.76
APTX-223	ENST00000479656	NTN1	O95631	604 aa		10.28	□□□□□ -0.76
APTX-223	ENST00000479656	HPR	P00739	348 aa		10.28	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms