RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 UFSP2Q9NUQ7 469 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 SMOXQ9NWM0 555 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 GNG12Q9UBI6 72 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 CDH9Q9ULB4 789 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 MRPS18CQ9Y3D5 142 aaKnown RBP6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 WDR45Q9Y484 360 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 ZHX2Q9Y6X8 837 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 TTC41PQ6P2S7 1318 aa6.25□□□□□ -1.41
GAPVD1-217ENST00000479511 FAM74A7A6NL05 159 aa6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 TMCO5BA8MYB1 307 aa6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 STX7O15400 261 aaKnown RBP6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 SMAD6O43541 496 aaKnown RBP6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 LCMT2O60294 686 aaKnown RBP6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 HOXB7P09629 217 aa6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 NCK1P16333 377 aa6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 XRCC1P18887 633 aaPredicted RBP6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 SUCLG1P53597 346 aaKnown RBP6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 PRMT2P55345 433 aa6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 PEX3P56589 373 aa6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 GCKRQ14397 625 aa6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 FAM74A3Q4VXF1 159 aa6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 C1orf185Q5T7R7 199 aa6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 ATL3Q6DD88 541 aa6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 C19orf48Q6RUI8 117 aa6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 KIF6Q6ZMV9 814 aa6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 Q6ZPB1 254 aaPredicted RBP6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 LANCL3Q6ZV70 420 aa6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 CHMP1BQ7LBR1 199 aa6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 NANOGNBQ7Z5D8 188 aa6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 TBC1D10CQ8IV04 446 aa6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 OR6C4Q8NGE1 309 aa6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 OR6S1Q8NH40 331 aa6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 MAPK15Q8TD08 544 aa6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 ZNF524Q96C55 264 aa6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 TGM7Q96PF1 710 aa6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 RIT2Q99578 217 aa6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 FUCA2Q9BTY2 467 aa6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 HOXD1Q9GZZ0 328 aa6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 DCAF13Q9NV06 445 aaKnown RBP6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 USP16Q9Y5T5 823 aa6.24□□□□□ -1.41
GAPVD1-217ENST00000479511 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 CACNG3O60359 315 aa6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 FOXG1P55316 489 aaPredicted RBP6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 LINC01547P58512 204 aaPredicted RBP6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 SEC61GP60059 68 aa6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 NANOS2P60321 138 aaKnown RBP6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 HAND2P61296 217 aa6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 OSTNP61366 133 aa6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 NCBP1Q09161 790 aaKnown RBP6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 SRSF5Q13243 272 aaKnown RBP6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 RCN1Q15293 331 aa6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 TEAD2Q15562 447 aa6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 PCK2Q16822 640 aa6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 TMEM31Q5JXX7 168 aa6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 FFAR4Q5NUL3 377 aa6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 PRAMEF20Q5VT98 475 aa6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 WDR25Q64LD2 544 aaPredicted RBP6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 SLC35E4Q6ICL7 350 aa6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 KCNIP4Q6PIL6 250 aa6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 SPSB3Q6PJ21 355 aa6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 CYS1Q717R9 158 aa6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 ANKRD37Q7Z713 158 aa6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 UBE2J2Q8N2K1 259 aa6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 OR52J3Q8NH60 311 aa6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 DCPSQ96C86 337 aaKnown RBP6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 RASD2Q96D21 266 aa6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 PELI1Q96FA3 418 aa6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 ELMO2Q96JJ3 720 aa6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 ANKRD27Q96NW4 1050 aa6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 NMUR1Q9HB89 426 aa6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 IL1RAPQ9NPH3 570 aa6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 RAB20Q9NX57 234 aa6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 DUS2Q9NX74 493 aaKnown RBP6.23□□□□□ -1.41
GAPVD1-217ENST00000479511 KDM3BQ7LBC6 1761 aa6.22□□□□□ -1.41
GAPVD1-217ENST00000479511 LRRIQ4A6NIV6 560 aa6.22□□□□□ -1.41
GAPVD1-217ENST00000479511 C15orf61A6NNL5 157 aa6.22□□□□□ -1.41
GAPVD1-217ENST00000479511 LACTBL1A8MY62 500 aa6.22□□□□□ -1.41
GAPVD1-217ENST00000479511 ERVV-1B6SEH8 477 aa6.22□□□□□ -1.41
GAPVD1-217ENST00000479511 G3V2L1 256 aa6.22□□□□□ -1.41
GAPVD1-217ENST00000479511 FGF4P08620 206 aa6.22□□□□□ -1.41
GAPVD1-217ENST00000479511 SAA4P35542 130 aa6.22□□□□□ -1.41
GAPVD1-217ENST00000479511 FNTAP49354 379 aa6.22□□□□□ -1.41
GAPVD1-217ENST00000479511 FAM189A2Q15884 450 aa6.22□□□□□ -1.41
GAPVD1-217ENST00000479511 ACCSLQ4AC99 568 aa6.22□□□□□ -1.41
GAPVD1-217ENST00000479511 BCL7AQ4VC05 210 aa6.22□□□□□ -1.41
GAPVD1-217ENST00000479511 AGAP7PQ5VUJ5 663 aa6.22□□□□□ -1.41
GAPVD1-217ENST00000479511 BTNL3Q6UXE8 466 aa6.22□□□□□ -1.41
GAPVD1-217ENST00000479511 GDPD4Q6W3E5 623 aa6.22□□□□□ -1.41
GAPVD1-217ENST00000479511 ADAMTSL5Q6ZMM2 481 aa6.22□□□□□ -1.41
GAPVD1-217ENST00000479511 RAB3IL1Q8TBN0 382 aa6.22□□□□□ -1.41
GAPVD1-217ENST00000479511 LRRC15Q8TF66 581 aa6.22□□□□□ -1.41
GAPVD1-217ENST00000479511 SLCO2A1Q92959 643 aa6.22□□□□□ -1.41
GAPVD1-217ENST00000479511 NTNG2Q96CW9 530 aa6.22□□□□□ -1.41
GAPVD1-217ENST00000479511 AGAP4Q96P64 663 aa6.22□□□□□ -1.41
GAPVD1-217ENST00000479511 ALKBH3Q96Q83 286 aaPredicted RBP6.22□□□□□ -1.41
GAPVD1-217ENST00000479511 ROPN1BQ9BZX4 212 aaPredicted RBP6.22□□□□□ -1.41
GAPVD1-217ENST00000479511 PKIBQ9C010 78 aa6.22□□□□□ -1.41
GAPVD1-217ENST00000479511 POLD4Q9HCU8 107 aa6.22□□□□□ -1.41
GAPVD1-217ENST00000479511 NLGN3Q9NZ94 848 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms