RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 C20orf173Q96LM9 149 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 TRNT1Q96Q11 434 aaKnown RBP6.14□□□□□ -1.43
USP48-208ENST00000479177 LPAR4Q99677 370 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 TREX2Q9BQ50 279 aaPredicted RBP6.14□□□□□ -1.43
USP48-208ENST00000479177 BTBD2Q9BX70 525 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 GPR87Q9BY21 358 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 WWTR1Q9GZV5 400 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 ZNF350Q9GZX5 532 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 ZNF700Q9H0M5 742 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 SLC38A1Q9H2H9 487 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 RNPEPL1Q9HAU8 725 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 S100A14Q9HCY8 104 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 BCL2L10Q9HD36 194 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 EXD2Q9NVH0 621 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 CALML5Q9NZT1 146 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 ANAPC2Q9UJX6 822 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 CFL2Q9Y281 166 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 FARSAQ9Y285 508 aaKnown RBP6.14□□□□□ -1.43
USP48-208ENST00000479177 PCDHGA6Q9Y5G7 932 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 V9GYQ6 96 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 FREM2Q5SZK8 3169 aa6.14□□□□□ -1.43
USP48-208ENST00000479177 DOCK10Q96BY6 2186 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 IGHV1-45A0A0A0MS14 117 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 A0A0G2JPF8 293 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 TRBV11-1A0A0K0K1C0 115 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 OR14I1A6ND48 311 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 NUDT19A8MXV4 375 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 HNRNPCL2B2RXH8 293 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 HNRNPCL3B7ZW38 293 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 NPIPB6E9PJ23 425 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 ETV2O00321 342 aaPredicted RBP6.13□□□□□ -1.43
USP48-208ENST00000479177 PRKNO60260 465 aaPredicted RBP6.13□□□□□ -1.43
USP48-208ENST00000479177 FKBP6O75344 327 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 PRKD3O94806 890 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 SOX30O94993 753 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 KCNK2O95069 426 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 ATP6V1G2O95670 118 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 ZNF682O95780 498 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 SEMG1P04279 462 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 THBDP07204 575 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 GUSBP08236 651 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 HNRNPCL4P0DMR1 293 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 CT45A8P0DMV1 189 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 CT45A9P0DMV2 189 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 UMPSP11172 480 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 ETS2P15036 469 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 RPS4Y1P22090 263 aaKnown RBP6.13□□□□□ -1.43
USP48-208ENST00000479177 PSMA4P25789 261 aaKnown RBP6.13□□□□□ -1.43
USP48-208ENST00000479177 SLC7A1P30825 629 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 OTX2P32243 289 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 DLSTP36957 453 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 PPICP45877 212 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 DCAF7P61962 342 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 RPS15P62841 145 aaKnown RBP6.13□□□□□ -1.43
USP48-208ENST00000479177 RTP5Q14D33 572 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 NNATQ16517 81 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 ARHGAP11BQ3KRB8 267 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 GPAT3Q53EU6 434 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 CYBRD1Q53TN4 286 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 CT45A2Q5DJT8 189 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 CCNJQ5T5M9 372 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 TYW3Q6IPR3 259 aaKnown RBP6.13□□□□□ -1.43
USP48-208ENST00000479177 KIRREL2Q6UWL6 708 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 EIF3MQ7L2H7 374 aaKnown RBP6.13□□□□□ -1.43
USP48-208ENST00000479177 SLC29A4Q7RTT9 530 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 MRGPREQ86SM8 312 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 C10orf67Q8IYJ2 551 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 AMER2Q8N7J2 671 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 C17orf47Q8NEP4 570 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 OR11G2Q8NGC1 345 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 POP5Q969H6 163 aaKnown RBP6.13□□□□□ -1.43
USP48-208ENST00000479177 ADIPOR1Q96A54 375 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 FAM122AQ96E09 287 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 RMND5BQ96G75 393 aaPredicted RBP6.13□□□□□ -1.43
USP48-208ENST00000479177 VMP1Q96GC9 406 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 IMMP1LQ96LU5 166 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 COL21A1Q96P44 957 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 GAL3ST4Q96RP7 486 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 LMF1Q96S06 567 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 ZNF607Q96SK3 696 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 SDF2Q99470 211 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 RSPO3Q9BXY4 272 aaPredicted RBP6.13□□□□□ -1.43
USP48-208ENST00000479177 NXF5Q9H1B4 397 aaKnown RBP6.13□□□□□ -1.43
USP48-208ENST00000479177 MAGIXQ9H6Y5 334 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 Q9N2J8 555 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 POLE3Q9NRF9 147 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 THSD1Q9NS62 852 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 CCM2LQ9NUG4 571 aaPredicted RBP6.13□□□□□ -1.43
USP48-208ENST00000479177 RPS6KA6Q9UK32 745 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 KLK13Q9UKR3 277 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 ANGPTL2Q9UKU9 493 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 SAMD4AQ9UPU9 718 aaKnown RBP6.13□□□□□ -1.43
USP48-208ENST00000479177 PCDHGB3Q9Y5G1 929 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 MRPS18BQ9Y676 258 aaKnown RBP6.13□□□□□ -1.43
USP48-208ENST00000479177 DCHS1Q96JQ0 3298 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 MED13Q9UHV7 2174 aa6.13□□□□□ -1.43
USP48-208ENST00000479177 CENPVL1A0A0U1RR11 272 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 C2orf92A0A1B0GVN3 265 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 NPIPB9F8W1W9 429 aa6.12□□□□□ -1.43
USP48-208ENST00000479177 H0Y3Z8 333 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms