RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 A0A0D9SEW6 157 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 NPIPB8E9PQR5 432 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 ETHE1O95571 254 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 CH25HO95992 272 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 CD63P08962 238 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 MUC1P15941 1255 aaPredicted RBP19.85■□□□□ 0.77
SDF4-206ENST00000478938 SOAT1P35610 550 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 GCGRP47871 477 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 BLOC1S1P78537 153 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 SORDQ00796 357 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 CHIT1Q13231 466 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 EIF2S3LQ2VIR3 472 aaKnown RBP19.85■□□□□ 0.77
SDF4-206ENST00000478938 DEFB115Q30KQ5 88 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 LINC00303Q3SY05 128 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 FAM69AQ5T7M9 428 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 TRIM40Q6P9F5 258 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 SYT9Q86SS6 491 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 IQCHQ86VS3 1027 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 TLNRD1Q9H1K6 362 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 PIGMQ9H3S5 423 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 WBP1LQ9NX94 342 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 PLXNB2O15031 1838 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 CARNS1A5YM72 827 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 ARAFP10398 606 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 CACNG1Q06432 222 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 CLEC12AQ5QGZ9 265 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 FUT10Q6P4F1 479 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 PGAP1Q75T13 922 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 LINGO2Q7L985 606 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 TPRA1Q86W33 373 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 POGLUT1Q8NBL1 392 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 ZFPM2Q8WW38 1151 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 TOX2Q96NM4 488 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 TEFMQ96QE5 360 aaKnown RBP19.85■□□□□ 0.77
SDF4-206ENST00000478938 TAS2R5Q9NYW4 299 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 PCDHB9Q9Y5E1 797 aa19.85■□□□□ 0.77
SDF4-206ENST00000478938 KIAA1671Q9BY89 1806 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 A0A1B0GTQ1 180 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 A0A1W2PPE3 182 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 MGAT4DA6NG13 374 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 E7EQ34 232 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 GOSR2O14653 212 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 EIF4E2O60573 245 aaKnown RBP19.84■□□□□ 0.77
SDF4-206ENST00000478938 SLC9B2Q86UD5 537 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 WDSUB1Q8N9V3 476 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 STK35Q8TDR2 534 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 ECHDC3Q96DC8 303 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 MGME1Q9BQP7 344 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 WDR13Q9H1Z4 485 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 RDH14Q9HBH5 336 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 ASF1BQ9NVP2 202 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 ATXN7L1Q9ULK2 861 aaPredicted RBP19.84■□□□□ 0.77
SDF4-206ENST00000478938 RNASET2O00584 256 aaKnown RBP19.84■□□□□ 0.77
SDF4-206ENST00000478938 PTGESO14684 152 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 PRAMEF12O95522 483 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 UBBP0CG47 229 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 UBCP0CG48 685 aaKnown RBP19.84■□□□□ 0.77
SDF4-206ENST00000478938 CD22P20273 847 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 AOAHP28039 575 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 BDKRB2P30411 391 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 ATP6V1E1P36543 226 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 RPS26P62854 115 aaKnown RBP19.84■□□□□ 0.77
SDF4-206ENST00000478938 RPS27AP62979 156 aaKnown RBP19.84■□□□□ 0.77
SDF4-206ENST00000478938 UBA52P62987 128 aaKnown RBP19.84■□□□□ 0.77
SDF4-206ENST00000478938 ACSM1Q08AH1 577 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 FABP9Q0Z7S8 132 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 KLHL26Q53HC5 615 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 ARL9Q6T311 187 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 FAM122BQ7Z309 247 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 BBS1Q8NFJ9 593 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 ZDHHC12Q96GR4 267 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 ZNF75AQ96N20 296 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 TRIM62Q9BVG3 475 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 PDGFDQ9GZP0 370 aaPredicted RBP19.84■□□□□ 0.77
SDF4-206ENST00000478938 PDFQ9HBH1 243 aa19.84■□□□□ 0.77
SDF4-206ENST00000478938 GPN1Q9HCN4 374 aaPredicted RBP19.84■□□□□ 0.77
SDF4-206ENST00000478938 PIKFYVEQ9Y2I7 2098 aa19.83■□□□□ 0.77
SDF4-206ENST00000478938 GNG14A0A1W2PPG7 69 aa19.83■□□□□ 0.77
SDF4-206ENST00000478938 C5orf58C9J3I9 102 aa19.83■□□□□ 0.77
SDF4-206ENST00000478938 F5H5P2 479 aa19.83■□□□□ 0.77
SDF4-206ENST00000478938 GSTZ1O43708 216 aaPredicted RBP19.83■□□□□ 0.77
SDF4-206ENST00000478938 PPT1P50897 306 aa19.83■□□□□ 0.77
SDF4-206ENST00000478938 DLX5P56178 289 aa19.83■□□□□ 0.77
SDF4-206ENST00000478938 C21orf58P58505 322 aa19.83■□□□□ 0.77
SDF4-206ENST00000478938 DEFA6Q01524 100 aa19.83■□□□□ 0.77
SDF4-206ENST00000478938 DOC2AQ14183 400 aa19.83■□□□□ 0.77
SDF4-206ENST00000478938 LRRC70Q7Z2Q7 622 aa19.83■□□□□ 0.77
SDF4-206ENST00000478938 OR4K5Q8NGD3 323 aa19.83■□□□□ 0.77
SDF4-206ENST00000478938 TXNRD2Q9NNW7 524 aa19.83■□□□□ 0.77
SDF4-206ENST00000478938 KDM4EB2RXH2 506 aaPredicted RBP19.83■□□□□ 0.76
SDF4-206ENST00000478938 E9PI62 339 aa19.83■□□□□ 0.76
SDF4-206ENST00000478938 CLN5O75503 358 aa19.83■□□□□ 0.76
SDF4-206ENST00000478938 ZNF7P17097 686 aaPredicted RBP19.83■□□□□ 0.76
SDF4-206ENST00000478938 ATF1P18846 271 aa19.83■□□□□ 0.76
SDF4-206ENST00000478938 PSMD4P55036 377 aaKnown RBP19.83■□□□□ 0.76
SDF4-206ENST00000478938 SRSF3P84103 164 aaKnown RBP19.83■□□□□ 0.76
SDF4-206ENST00000478938 C21orf62-AS1Q17RA5 79 aa19.83■□□□□ 0.76
SDF4-206ENST00000478938 GPRC6AQ5T6X5 926 aa19.83■□□□□ 0.76
SDF4-206ENST00000478938 OR2W3Q7Z3T1 314 aa19.83■□□□□ 0.76
SDF4-206ENST00000478938 CEACAM19Q7Z692 300 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms