RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 KCNE3Q9Y6H6 103 aa21.11■□□□□ 0.97
C9orf3-215ENST00000478473 ANKRD17O75179 2603 aaKnown RBP21.1■□□□□ 0.97
C9orf3-215ENST00000478473 PRSS51A0A1B0GVH4 220 aa21.1■□□□□ 0.97
C9orf3-215ENST00000478473 DUXAA6NLW8 204 aa21.1■□□□□ 0.97
C9orf3-215ENST00000478473 SDHDO14521 159 aa21.1■□□□□ 0.97
C9orf3-215ENST00000478473 HPGDP15428 266 aa21.1■□□□□ 0.97
C9orf3-215ENST00000478473 TCEA1P23193 301 aaKnown RBP21.1■□□□□ 0.97
C9orf3-215ENST00000478473 CLDN20P56880 219 aa21.1■□□□□ 0.97
C9orf3-215ENST00000478473 GUSBP1Q15486 140 aa21.1■□□□□ 0.97
C9orf3-215ENST00000478473 PGS1Q32NB8 556 aa21.1■□□□□ 0.97
C9orf3-215ENST00000478473 PLPPR5Q32ZL2 321 aa21.1■□□□□ 0.97
C9orf3-215ENST00000478473 SPDYE7PQ495Y7 208 aa21.1■□□□□ 0.97
C9orf3-215ENST00000478473 CLECL1Q8IZS7 167 aa21.1■□□□□ 0.97
C9orf3-215ENST00000478473 PPP1R36Q96LQ0 422 aa21.1■□□□□ 0.97
C9orf3-215ENST00000478473 OR7D2Q96RA2 312 aa21.1■□□□□ 0.97
C9orf3-215ENST00000478473 SERHL2Q9H4I8 314 aa21.1■□□□□ 0.97
C9orf3-215ENST00000478473 RNF122Q9H9V4 155 aa21.1■□□□□ 0.97
C9orf3-215ENST00000478473 MED17Q9NVC6 651 aa21.1■□□□□ 0.97
C9orf3-215ENST00000478473 A0A1W2PNV4 684 aa21.09■□□□□ 0.97
C9orf3-215ENST00000478473 SLC22A20A6NK97 555 aa21.09■□□□□ 0.97
C9orf3-215ENST00000478473 A8MXE2 369 aa21.09■□□□□ 0.97
C9orf3-215ENST00000478473 H0YC42 278 aa21.09■□□□□ 0.97
C9orf3-215ENST00000478473 HDAC3O15379 428 aa21.09■□□□□ 0.97
C9orf3-215ENST00000478473 CFLARO15519 480 aa21.09■□□□□ 0.97
C9orf3-215ENST00000478473 AK1P00568 194 aa21.09■□□□□ 0.97
C9orf3-215ENST00000478473 AGFG1P52594 562 aaKnown RBP21.09■□□□□ 0.97
C9orf3-215ENST00000478473 CLNS1AP54105 237 aaKnown RBP21.09■□□□□ 0.97
C9orf3-215ENST00000478473 ATP12AP54707 1039 aa21.09■□□□□ 0.97
C9orf3-215ENST00000478473 TPD52P55327 224 aaPredicted RBP21.09■□□□□ 0.97
C9orf3-215ENST00000478473 CASP8Q14790 479 aa21.09■□□□□ 0.97
C9orf3-215ENST00000478473 TESK1Q15569 626 aa21.09■□□□□ 0.97
C9orf3-215ENST00000478473 ANXA8L1Q5VT79 327 aa21.09■□□□□ 0.97
C9orf3-215ENST00000478473 PLXDC2Q6UX71 529 aa21.09■□□□□ 0.97
C9orf3-215ENST00000478473 CHMP1BQ7LBR1 199 aa21.09■□□□□ 0.97
C9orf3-215ENST00000478473 C6orf120Q7Z4R8 191 aa21.09■□□□□ 0.97
C9orf3-215ENST00000478473 CDH24Q86UP0 819 aa21.09■□□□□ 0.97
C9orf3-215ENST00000478473 ANKRD42Q8N9B4 389 aa21.09■□□□□ 0.97
C9orf3-215ENST00000478473 OR5M1Q8NGP8 315 aa21.09■□□□□ 0.97
C9orf3-215ENST00000478473 OIT3Q8WWZ8 545 aa21.09■□□□□ 0.97
C9orf3-215ENST00000478473 ADGRG7Q96K78 797 aa21.09■□□□□ 0.97
C9orf3-215ENST00000478473 SDF2Q99470 211 aa21.09■□□□□ 0.97
C9orf3-215ENST00000478473 STOML1Q9UBI4 398 aa21.09■□□□□ 0.97
C9orf3-215ENST00000478473 PACSIN3Q9UKS6 424 aa21.09■□□□□ 0.97
C9orf3-215ENST00000478473 SLCO1B7G3V0H7 640 aa21.08■□□□□ 0.97
C9orf3-215ENST00000478473 H3BML4 177 aa21.08■□□□□ 0.97
C9orf3-215ENST00000478473 MSTNO14793 375 aa21.08■□□□□ 0.97
C9orf3-215ENST00000478473 ADAMDEC1O15204 470 aa21.08■□□□□ 0.97
C9orf3-215ENST00000478473 GOSR1O95249 250 aa21.08■□□□□ 0.97
C9orf3-215ENST00000478473 ALDOCP09972 364 aaKnown RBP21.08■□□□□ 0.97
C9orf3-215ENST00000478473 LINGO3P0C6S8 592 aa21.08■□□□□ 0.97
C9orf3-215ENST00000478473 ATP6V1C1P21283 382 aa21.08■□□□□ 0.97
C9orf3-215ENST00000478473 SUMO3P55854 103 aaPredicted RBP21.08■□□□□ 0.97
C9orf3-215ENST00000478473 RPS3AP61247 264 aaKnown RBP21.08■□□□□ 0.97
C9orf3-215ENST00000478473 MAGOHP61326 146 aaKnown RBP21.08■□□□□ 0.97
C9orf3-215ENST00000478473 RAC1P63000 192 aa21.08■□□□□ 0.97
C9orf3-215ENST00000478473 HEPHL1Q6MZM0 1159 aa21.08■□□□□ 0.97
C9orf3-215ENST00000478473 SPATA19Q7Z5L4 167 aa21.08■□□□□ 0.97
C9orf3-215ENST00000478473 ZZZ3Q8IYH5 903 aa21.08■□□□□ 0.97
C9orf3-215ENST00000478473 UBQLNLQ8IYU4 475 aa21.08■□□□□ 0.97
C9orf3-215ENST00000478473 GCNT2Q8N0V5 402 aa21.08■□□□□ 0.97
C9orf3-215ENST00000478473 ZNF527Q8NB42 609 aa21.08■□□□□ 0.97
C9orf3-215ENST00000478473 B4GALNT2Q8NHY0 566 aa21.08■□□□□ 0.97
C9orf3-215ENST00000478473 FIG4Q92562 907 aa21.08■□□□□ 0.97
C9orf3-215ENST00000478473 PAIP2Q9BPZ3 127 aaKnown RBP21.08■□□□□ 0.97
C9orf3-215ENST00000478473 NMUR2Q9GZQ4 415 aa21.08■□□□□ 0.97
C9orf3-215ENST00000478473 AIG1Q9NVV5 245 aa21.08■□□□□ 0.97
C9orf3-215ENST00000478473 ICAM5Q9UMF0 924 aa21.08■□□□□ 0.97
C9orf3-215ENST00000478473 VDAC3Q9Y277 283 aa21.08■□□□□ 0.97
C9orf3-215ENST00000478473 EEF1E1-BLOC1S5C9J1V9 151 aa21.07■□□□□ 0.96
C9orf3-215ENST00000478473 KLF11O14901 512 aa21.07■□□□□ 0.96
C9orf3-215ENST00000478473 EEF1E1O43324 174 aaKnown RBP21.07■□□□□ 0.96
C9orf3-215ENST00000478473 EPXP11678 715 aa21.07■□□□□ 0.96
C9orf3-215ENST00000478473 ADH6P28332 368 aa21.07■□□□□ 0.96
C9orf3-215ENST00000478473 EIF1P41567 113 aaKnown RBP21.07■□□□□ 0.96
C9orf3-215ENST00000478473 CTU2Q2VPK5 515 aaKnown RBP21.07■□□□□ 0.96
C9orf3-215ENST00000478473 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.07■□□□□ 0.96
C9orf3-215ENST00000478473 ATG16L1Q676U5 607 aa21.07■□□□□ 0.96
C9orf3-215ENST00000478473 GATSQ8NAP1 163 aa21.07■□□□□ 0.96
C9orf3-215ENST00000478473 VPS37AQ8NEZ2 397 aa21.07■□□□□ 0.96
C9orf3-215ENST00000478473 OR5AK3PQ8NH89 298 aa21.07■□□□□ 0.96
C9orf3-215ENST00000478473 ZBTB9Q96C00 473 aa21.07■□□□□ 0.96
C9orf3-215ENST00000478473 STARD4Q96DR4 205 aa21.07■□□□□ 0.96
C9orf3-215ENST00000478473 MAELQ96JY0 434 aaKnown RBP21.07■□□□□ 0.96
C9orf3-215ENST00000478473 NPAS1Q99742 590 aa21.07■□□□□ 0.96
C9orf3-215ENST00000478473 KLHDC3Q9BQ90 382 aa21.07■□□□□ 0.96
C9orf3-215ENST00000478473 PINK1Q9BXM7 581 aa21.07■□□□□ 0.96
C9orf3-215ENST00000478473 RASSF1Q9NS23 344 aa21.07■□□□□ 0.96
C9orf3-215ENST00000478473 PAQR5Q9NXK6 330 aaPredicted RBP21.07■□□□□ 0.96
C9orf3-215ENST00000478473 PCDHGB4Q9UN71 923 aa21.07■□□□□ 0.96
C9orf3-215ENST00000478473 AKAP9Q99996 3911 aa21.07■□□□□ 0.96
C9orf3-215ENST00000478473 TUBAL3A6NHL2 446 aa21.06■□□□□ 0.96
C9orf3-215ENST00000478473 TRPC5OSA6NMA1 111 aa21.06■□□□□ 0.96
C9orf3-215ENST00000478473 E9PBE3 544 aa21.06■□□□□ 0.96
C9orf3-215ENST00000478473 ETV2O00321 342 aaPredicted RBP21.06■□□□□ 0.96
C9orf3-215ENST00000478473 DNAJA2O60884 412 aa21.06■□□□□ 0.96
C9orf3-215ENST00000478473 MATN1P21941 496 aa21.06■□□□□ 0.96
C9orf3-215ENST00000478473 UQCRC2P22695 453 aa21.06■□□□□ 0.96
C9orf3-215ENST00000478473 KIR2DL2P43627 348 aaPredicted RBP21.06■□□□□ 0.96
C9orf3-215ENST00000478473 ZNF117Q03924 483 aa21.06■□□□□ 0.96
C9orf3-215ENST00000478473 SNTB1Q13884 538 aaKnown RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms