RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 ZNF708P17019 499 aa14.1□□□□□ -0.15
HMGA1-206ENST00000478214 MSX1P28360 303 aa14.1□□□□□ -0.15
HMGA1-206ENST00000478214 MRPL19P49406 292 aaKnown RBP14.1□□□□□ -0.15
HMGA1-206ENST00000478214 KHKP50053 298 aa14.1□□□□□ -0.15
HMGA1-206ENST00000478214 CLDN18P56856 261 aa14.1□□□□□ -0.15
HMGA1-206ENST00000478214 STX1BP61266 288 aa14.1□□□□□ -0.15
HMGA1-206ENST00000478214 SF3B4Q15427 424 aaKnown RBP eCLIP14.1□□□□□ -0.153e-7■■□□□ 12.6
HMGA1-206ENST00000478214 GPR68Q15743 365 aa14.1□□□□□ -0.15
HMGA1-206ENST00000478214 NSUN5P2Q63ZY6 315 aa14.1□□□□□ -0.15
HMGA1-206ENST00000478214 HEPHL1Q6MZM0 1159 aa14.1□□□□□ -0.15
HMGA1-206ENST00000478214 LACC1Q8IV20 430 aa14.1□□□□□ -0.15
HMGA1-206ENST00000478214 LIX1LQ8IVB5 337 aa14.1□□□□□ -0.15
HMGA1-206ENST00000478214 ZNF614Q8N883 585 aa14.1□□□□□ -0.15
HMGA1-206ENST00000478214 ZNF527Q8NB42 609 aa14.1□□□□□ -0.15
HMGA1-206ENST00000478214 TNIP2Q8NFZ5 429 aa14.1□□□□□ -0.15
HMGA1-206ENST00000478214 PNPT1Q8TCS8 783 aaKnown RBP14.1□□□□□ -0.15
HMGA1-206ENST00000478214 PHOSPHO1Q8TCT1 267 aa14.1□□□□□ -0.15
HMGA1-206ENST00000478214 ZPLD1Q8TCW7 415 aa14.1□□□□□ -0.15
HMGA1-206ENST00000478214 ZNF350Q9GZX5 532 aa14.1□□□□□ -0.15
HMGA1-206ENST00000478214 HHATLQ9HCP6 504 aa14.1□□□□□ -0.15
HMGA1-206ENST00000478214 CHST11Q9NPF2 352 aa14.1□□□□□ -0.15
HMGA1-206ENST00000478214 MKLN1Q9UL63 735 aa14.1□□□□□ -0.15
HMGA1-206ENST00000478214 VDAC3Q9Y277 283 aa14.1□□□□□ -0.15
HMGA1-206ENST00000478214 ZNF337Q9Y3M9 751 aa14.1□□□□□ -0.15
HMGA1-206ENST00000478214 PHF3Q92576 2039 aaKnown RBP14.1□□□□□ -0.15
HMGA1-206ENST00000478214 CELSR2Q9HCU4 2923 aa14.1□□□□□ -0.15
HMGA1-206ENST00000478214 NOTCH2Q04721 2471 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 CENPVL1A0A0U1RR11 272 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 PRAMEF27A3QJZ7 478 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 NKX2-6A6NCS4 301 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 CD8B2A6NJW9 211 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 FAM47E-STBD1D6RA91 191 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 HCRTR2O43614 444 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 TNFRSF21O75509 655 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 AGR2O95994 175 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 POU3F2P20265 443 aaPredicted RBP14.09□□□□□ -0.15
HMGA1-206ENST00000478214 ZNF117Q03924 483 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 FUT5Q11128 374 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 RCAN2Q14206 197 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 TMEM44Q2T9K0 475 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 GLYR1Q49A26 553 aaPredicted RBP14.09□□□□□ -0.15
HMGA1-206ENST00000478214 GTDC1Q4AE62 458 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 COX20Q5RI15 118 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 PDZK1Q5T2W1 519 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 ATAD3BQ5T9A4 648 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 CBLN3Q6UW01 205 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 PLXDC2Q6UX71 529 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 MSANTD1Q6ZTZ1 278 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 FUNDC1Q8IVP5 155 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 UBQLNLQ8IYU4 475 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 NAXEQ8NCW5 288 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 B4GALNT2Q8NHY0 566 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 RFWD2Q8NHY2 731 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 ROPN1LQ96C74 230 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 NPAS1Q99742 590 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 PIGQQ9BRB3 760 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 NMUR2Q9GZQ4 415 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 RMND5AQ9H871 391 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 NPHS2Q9NP85 383 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 KCNE5Q9UJ90 142 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 DCTN4Q9UJW0 460 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 CARD8Q9Y2G2 431 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 DTNAQ9Y4J8 743 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 ADGRG4Q8IZF6 3080 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 CACNA1CQ13936 2221 aa14.09□□□□□ -0.15
HMGA1-206ENST00000478214 MAST4O15021 2626 aa14.08□□□□□ -0.16
HMGA1-206ENST00000478214 A0A087WZY1 265 aa14.08□□□□□ -0.16
HMGA1-206ENST00000478214 CLCA1A8K7I4 914 aa14.08□□□□□ -0.16
HMGA1-206ENST00000478214 HSPB2A8KAH6 182 aa14.08□□□□□ -0.16
HMGA1-206ENST00000478214 H0YC42 278 aa14.08□□□□□ -0.16
HMGA1-206ENST00000478214 H3BML4 177 aa14.08□□□□□ -0.16
HMGA1-206ENST00000478214 H3BNH8 94 aa14.08□□□□□ -0.16
HMGA1-206ENST00000478214 GTPBP1O00178 669 aaKnown RBP14.08□□□□□ -0.16
HMGA1-206ENST00000478214 HMGN4O00479 90 aa14.08□□□□□ -0.16
HMGA1-206ENST00000478214 PEPDP12955 493 aa14.08□□□□□ -0.16
HMGA1-206ENST00000478214 CEACAM8P31997 349 aaPredicted RBP14.08□□□□□ -0.16
HMGA1-206ENST00000478214 TIMP3P35625 211 aa14.08□□□□□ -0.16
HMGA1-206ENST00000478214 TPD52P55327 224 aaPredicted RBP14.08□□□□□ -0.16
HMGA1-206ENST00000478214 CLDN15P56746 228 aa14.08□□□□□ -0.16
HMGA1-206ENST00000478214 HSPB2Q16082 182 aa14.08□□□□□ -0.16
HMGA1-206ENST00000478214 BCL2A1Q16548 175 aa14.08□□□□□ -0.16
HMGA1-206ENST00000478214 NDUFAF6Q330K2 333 aa14.08□□□□□ -0.16
HMGA1-206ENST00000478214 HSP90B2PQ58FF3 399 aa14.08□□□□□ -0.16
HMGA1-206ENST00000478214 C6orf10Q5SRN2 563 aa14.08□□□□□ -0.16
HMGA1-206ENST00000478214 SLC2A7Q6PXP3 512 aa14.08□□□□□ -0.16
HMGA1-206ENST00000478214 MTERF4Q7Z6M4 381 aaKnown RBP14.08□□□□□ -0.16
HMGA1-206ENST00000478214 ADGRE4PQ86SQ3 457 aa14.08□□□□□ -0.16
HMGA1-206ENST00000478214 C9orf106Q8NAJ2 232 aa14.08□□□□□ -0.16
HMGA1-206ENST00000478214 ZFP90Q8TF47 636 aa14.08□□□□□ -0.16
HMGA1-206ENST00000478214 GTF2H4Q92759 462 aa14.08□□□□□ -0.16
HMGA1-206ENST00000478214 ITCHQ96J02 903 aa14.08□□□□□ -0.16
HMGA1-206ENST00000478214 CALHM2Q9HA72 323 aa14.08□□□□□ -0.16
HMGA1-206ENST00000478214 KCNJ16Q9NPI9 418 aa14.08□□□□□ -0.16
HMGA1-206ENST00000478214 MED17Q9NVC6 651 aa14.08□□□□□ -0.16
HMGA1-206ENST00000478214 CCDC167Q9P0B6 97 aa14.08□□□□□ -0.16
HMGA1-206ENST00000478214 NAV2Q8IVL1 2488 aa14.07□□□□□ -0.16
HMGA1-206ENST00000478214 PCNX3Q9H6A9 2034 aa14.07□□□□□ -0.16
HMGA1-206ENST00000478214 MBD3L4A6NDZ8 208 aaPredicted RBP14.07□□□□□ -0.16
HMGA1-206ENST00000478214 MBD3L3A6NE82 208 aaPredicted RBP14.07□□□□□ -0.16
HMGA1-206ENST00000478214 SERINC4A6NH21 518 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms