RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 PDZD3Q86UT5 571 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 CILP2Q8IUL8 1156 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 CPXM2Q8N436 756 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 BEST4Q8NFU0 473 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 OR56A4Q8NGH8 313 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 MARS2Q96GW9 593 aaKnown RBP11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 KCTD7Q96MP8 289 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 HDHD2Q9H0R4 259 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 TSPAN10Q9H1Z9 355 aaPredicted RBP11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 DZANK1Q9NVP4 752 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 TXNL4BQ9NX01 149 aaKnown RBP11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 ZNF629Q9UEG4 869 aaPredicted RBP11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 OBSL1O75147 1896 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 PRRT4C9JH25 899 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 PIP5K1BO14986 540 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 RPP40O75818 363 aaKnown RBP11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 GLP2RO95838 553 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 OMPP47874 163 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 SELENOPP49908 381 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 PPT1P50897 306 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 MTPNP58546 118 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 TRAM1Q15629 374 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 USF2Q15853 346 aaPredicted RBP11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 MPPE1Q53F39 396 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 CARD16Q5EG05 197 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 FAM46CQ5VWP2 391 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 H3F3CQ6NXT2 135 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 TPGS1Q6ZTW0 290 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 B3GNT7Q8NFL0 401 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 OR6K3Q8NGY3 331 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 OR56A3Q8NH54 315 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 OR56B4Q8NH76 319 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 HUS1BQ8NHY5 278 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 XAGE5Q8WWM1 108 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 TRIB3Q96RU7 358 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 UBL7Q96S82 380 aaPredicted RBP11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 SPRTNQ9H040 489 aaPredicted RBP11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 AMBNQ9NP70 447 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 PRDM7Q9NQW5 492 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 SMCO4Q9NRQ5 59 aa11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 LSM2Q9Y333 95 aaKnown RBP11.86□□□□□ -0.51
RTFDC1-207ENST00000477573 TMEM72A0PK05 275 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 NUDT19A8MXV4 375 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 GFRA2O00451 464 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 AZIN1O14977 448 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 HCRTR2O43614 444 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 SCN2BO60939 215 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 FZD7O75084 574 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 IL33O95760 270 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 C6orf47O95873 294 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 F7P08709 466 aaPredicted RBP11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 LINC00271P0C7V0 271 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 UBBP0CG47 229 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 UBCP0CG48 685 aaKnown RBP11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 CSF2RBP32927 897 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 RPS27AP62979 156 aaKnown RBP11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 UBA52P62987 128 aaKnown RBP11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 ARF5P84085 180 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 MLLT11Q13015 90 aaPredicted RBP11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 LAPTM4AQ15012 233 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 INPP5JQ15735 1006 aaPredicted RBP11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 UGT8Q16880 541 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 ATP6AP1LQ52LC2 224 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 GCNT6Q5T4J0 391 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 RIPPLY2Q5TAB7 128 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 LIPKQ5VXJ0 399 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 TMEM91Q6ZNR0 172 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 CMIPQ8IY22 773 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 SLC35F3Q8IY50 421 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 PRSS35Q8N3Z0 413 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 DCAF4L2Q8NA75 395 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 OR5T3Q8NGG3 340 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 GPR150Q8NGU9 434 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 OR4Q3Q8NH05 313 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 ACOT11Q8WXI4 607 aaPredicted RBP11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 BADQ92934 168 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 MED8Q96G25 268 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 ELF4Q99607 663 aaPredicted RBP11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 BARD1Q99728 777 aaKnown RBP11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 SEC11CQ9BY50 192 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 ISYNA1Q9NPH2 558 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 CFAP97Q9P2B7 532 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 RAI2Q9Y5P3 530 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 DENND4CQ5VZ89 1909 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 MKI67P46013 3256 aaKnown RBP11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 CXorf65A6NEN9 183 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 AGAP14A8MT82 685 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 DLEU1O43261 78 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 GJB3O75712 270 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 MT-ND4LP03901 98 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 CD2P06729 351 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 ZNF14P17017 642 aaPredicted RBP11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 HTR2AP28223 471 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 S100A2P29034 98 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 AVPR1AP37288 418 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 LBX1P52954 281 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 TAS2R39P59534 338 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 RAP1AP62834 184 aa11.85□□□□□ -0.51
RTFDC1-207ENST00000477573 FAM69AQ5T7M9 428 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms