RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 UFM1P61960 85 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 ERVK-25P63136 954 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 SKP1P63208 163 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 CRADDP78560 199 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 MRPS10P82664 201 aaKnown RBP4.4□□□□□ -1.71
PTCD3-212ENST00000477520 HOXC5Q00444 222 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 BDH1Q02338 343 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 C2orf80Q0P641 193 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 HLXQ14774 488 aaPredicted RBP4.4□□□□□ -1.71
PTCD3-212ENST00000477520 PEA15Q15121 130 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 PTPRRQ15256 657 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 ZNF239Q16600 458 aaKnown RBP4.4□□□□□ -1.71
PTCD3-212ENST00000477520 ZRANB3Q5FWF4 1079 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 RNASE10Q5GAN6 216 aaKnown RBP4.4□□□□□ -1.71
PTCD3-212ENST00000477520 OR2B11Q5JQS5 317 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 SAPCD1Q5SSQ6 148 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 THEM4Q5T1C6 240 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 BCL2L15Q5TBC7 163 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 BSPRYQ5W0U4 402 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 CLEC6AQ6EIG7 209 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 LAIR1Q6GTX8 287 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 EIF5AL1Q6IS14 154 aaKnown RBP4.4□□□□□ -1.71
PTCD3-212ENST00000477520 CRTC1Q6UUV9 634 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 SUSD1Q6UWL2 747 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 DEF8Q6ZN54 512 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 TPGS1Q6ZTW0 290 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 MOB3CQ70IA8 216 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 HIST3H2AQ7L7L0 130 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 TRMT1LQ7Z2T5 733 aaKnown RBP4.4□□□□□ -1.71
PTCD3-212ENST00000477520 MAMDC2Q7Z304 686 aaPredicted RBP4.4□□□□□ -1.71
PTCD3-212ENST00000477520 DCXRQ7Z4W1 244 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 WDR53Q7Z5U6 358 aaPredicted RBP4.4□□□□□ -1.71
PTCD3-212ENST00000477520 ABI3BPQ7Z7G0 1075 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 TMEM179BQ7Z7N9 219 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 ANKRD46Q86W74 232 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 PAQR7Q86WK9 346 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 METTL23Q86XA0 190 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 ANGPTL5Q86XS5 388 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 CCDC71Q8IV32 467 aaPredicted RBP4.4□□□□□ -1.71
PTCD3-212ENST00000477520 MISPQ8IVT2 679 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 SLC30A8Q8IWU4 369 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 SYNPOQ8N3V7 929 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 LINC00471Q8N535 108 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 NKAPQ8N5F7 415 aaKnown RBP4.4□□□□□ -1.71
PTCD3-212ENST00000477520 ZBTB2Q8N680 514 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 FAM98AQ8NCA5 519 aaKnown RBP4.4□□□□□ -1.71
PTCD3-212ENST00000477520 BEND2Q8NDZ0 799 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 B3GNT7Q8NFL0 401 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 BEST4Q8NFU0 473 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 OR5M3Q8NGP4 307 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 OR5J2Q8NH18 312 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 OR10A6Q8NH74 314 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 OR1S1Q8NH92 325 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 OR14A16Q8NHC5 309 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 WDR20Q8TBZ3 569 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 XAGE5Q8WWM1 108 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 TFAP2BQ92481 460 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 TFGQ92734 400 aaPredicted RBP4.4□□□□□ -1.71
PTCD3-212ENST00000477520 HIST1H2ACQ93077 130 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 EXOSC8Q96B26 276 aaKnown RBP4.4□□□□□ -1.71
PTCD3-212ENST00000477520 RGMAQ96B86 450 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 PABPC5Q96DU9 382 aaKnown RBP4.4□□□□□ -1.71
PTCD3-212ENST00000477520 MALSU1Q96EH3 234 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 PHF21BQ96EK2 531 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 ATXN7L3BQ96GX2 97 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 SHDQ96IW2 340 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 PPM1MQ96MI6 270 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 LRFN5Q96NI6 719 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 FCRL5Q96RD9 977 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 ZNF382Q96SR6 550 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 NELL2Q99435 816 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 PCYT2Q99447 389 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 PKMYT1Q99640 499 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 ZNF559Q9BR84 538 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 UTP23Q9BRU9 249 aaKnown RBP4.4□□□□□ -1.71
PTCD3-212ENST00000477520 MSTO1Q9BUK6 570 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 MRI1Q9BV20 369 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 KATNB1Q9BVA0 655 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 RIOK2Q9BVS4 552 aaKnown RBP4.4□□□□□ -1.71
PTCD3-212ENST00000477520 CACNG6Q9BXT2 260 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 REEP4Q9H6H4 257 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 ARNT2Q9HBZ2 717 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 SLC25A19Q9HC21 320 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 TREX1Q9NSU2 369 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 NLE1Q9NVX2 485 aaPredicted RBP4.4□□□□□ -1.71
PTCD3-212ENST00000477520 MS4A12Q9NXJ0 267 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 RASL12Q9NYN1 266 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 WWOXQ9NZC7 414 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 KLHL42Q9P2K6 505 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 WRAP73Q9P2S5 460 aaPredicted RBP4.4□□□□□ -1.71
PTCD3-212ENST00000477520 SLC17A6Q9P2U8 582 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 FZD10Q9ULW2 581 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 CLCA2Q9UQC9 943 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 CA5BQ9Y2D0 317 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 DLGAP4Q9Y2H0 992 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 RPH3AQ9Y2J0 694 aaPredicted RBP4.4□□□□□ -1.71
PTCD3-212ENST00000477520 EXOSC1Q9Y3B2 195 aaKnown RBP4.4□□□□□ -1.71
PTCD3-212ENST00000477520 TMEM184BQ9Y519 407 aaPredicted RBP4.4□□□□□ -1.71
PTCD3-212ENST00000477520 HES2Q9Y543 173 aa4.4□□□□□ -1.71
PTCD3-212ENST00000477520 PCDHGA2Q9Y5H1 932 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms