RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 TWF2Q6IBS0 349 aaKnown RBP3.61□□□□□ -1.83
VPS13D-207ENST00000476169 CAPRIN2Q6IMN6 1127 aaKnown RBP3.61□□□□□ -1.83
VPS13D-207ENST00000476169 HACD2Q6Y1H2 254 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 SSX9Q7RTT3 188 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 OR4N5Q8IXE1 308 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 MICU2Q8IYU8 434 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 SLC22A15Q8IZD6 547 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 FGFRL1Q8N441 504 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 KBTBD3Q8NAB2 608 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 ZSCAN4Q8NAM6 433 aaPredicted RBP3.61□□□□□ -1.83
VPS13D-207ENST00000476169 POC1AQ8NBT0 407 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 OR9Q2Q8NGE9 314 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 OR13F1Q8NGS4 319 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 LILRB4Q8NHJ6 448 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 HPSE2Q8WWQ2 592 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 ELMO1Q92556 727 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 DLX4Q92988 240 aaPredicted RBP3.61□□□□□ -1.83
VPS13D-207ENST00000476169 CD101Q93033 1021 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 TM4SF19Q96DZ7 209 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 PPP1R16AQ96I34 528 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 LYZL4Q96KX0 146 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 IL4I1Q96RQ9 567 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 FMO2Q99518 471 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 GAL3ST1Q99999 423 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 TEKT3Q9BXF9 490 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 PINK1Q9BXM7 581 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 PARD6BQ9BYG5 372 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 HIPK2Q9H2X6 1198 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 NARFLQ9H6Q4 476 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 MTHFD2LQ9H903 347 aaPredicted RBP3.61□□□□□ -1.83
VPS13D-207ENST00000476169 NMUR1Q9HB89 426 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 AHSPQ9NZD4 102 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 MBD2Q9UBB5 411 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 KLK11Q9UBX7 282 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 VANGL2Q9ULK5 521 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 DHRS7Q9Y394 339 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 EXOSC1Q9Y3B2 195 aaKnown RBP3.61□□□□□ -1.83
VPS13D-207ENST00000476169 RPAP1Q9BWH6 1393 aaPredicted RBP3.61□□□□□ -1.83
VPS13D-207ENST00000476169 UHRF1BP1LA0JNW5 1464 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 ATP10BO94823 1461 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 ARHGAP35Q9NRY4 1499 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 SMCHD1A6NHR9 2005 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 PBRM1Q86U86 1689 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 TRAV25A0A0B4J276 109 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 LOC100506127A0A0U1RQW1 187 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 ZNF879B4DU55 563 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 ZNF195O14628 629 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 CETN3O15182 167 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 MSH4O15457 936 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 RGS16O15492 202 aaPredicted RBP3.6□□□□□ -1.83
VPS13D-207ENST00000476169 TRMUO75648 421 aaKnown RBP3.6□□□□□ -1.83
VPS13D-207ENST00000476169 CDC123O75794 336 aaPredicted RBP3.6□□□□□ -1.83
VPS13D-207ENST00000476169 ATP5LO75964 103 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 PDE5AO76074 875 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 TSHBP01222 138 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 CRYGBP07316 175 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 ERCC1P07992 297 aaPredicted RBP3.6□□□□□ -1.83
VPS13D-207ENST00000476169 IGFBP1P08833 259 aaPredicted RBP3.6□□□□□ -1.83
VPS13D-207ENST00000476169 STAG3L2P0CL84 134 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 SNHG28P0DPA3 235 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 FGF3P11487 239 aaPredicted RBP3.6□□□□□ -1.83
VPS13D-207ENST00000476169 IMPDH1P20839 514 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 MSR1P21757 451 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 TUBG1P23258 451 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 MMP11P24347 488 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 ATP5A1P25705 553 aaKnown RBP3.6□□□□□ -1.83
VPS13D-207ENST00000476169 HSD17B2P37059 387 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 GNPDA1P46926 289 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 THBS3P49746 956 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 EMDP50402 254 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 NDST2P52849 883 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 ACLYP53396 1101 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 EMC2Q15006 297 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 RAB35Q15286 201 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 Q3ZCU0 254 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 GTDC1Q4AE62 458 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 HSP90AA4PQ58FG1 418 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 TECRLQ5HYJ1 363 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 DMRTC1Q5HYR2 192 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 BEND3Q5T5X7 828 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 ATRAIDQ6UW56 229 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 FOXL2NBQ6ZUU3 175 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 SH2D5Q6ZV89 423 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 CYS1Q717R9 158 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 APTXQ7Z2E3 356 aaKnown RBP3.6□□□□□ -1.83
VPS13D-207ENST00000476169 HSD11B1LQ7Z5J1 315 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 RBM23Q86U06 439 aaKnown RBP3.6□□□□□ -1.83
VPS13D-207ENST00000476169 CCDC65Q8IXS2 484 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 GTPBP8Q8N3Z3 284 aaPredicted RBP3.6□□□□□ -1.83
VPS13D-207ENST00000476169 DHRSXQ8N5I4 330 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 OR4C5Q8NGB2 326 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 OR5T2Q8NGG2 359 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 OR1L6Q8NGR2 347 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 OR1K1Q8NGR3 316 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 OR1B1Q8NGR6 318 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 OR9A1PQ8NGU1 263 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 OR6S1Q8NH40 331 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 HCAR2Q8TDS4 363 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 GPX8Q8TED1 209 aa3.6□□□□□ -1.83
VPS13D-207ENST00000476169 SLCO2A1Q92959 643 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms