RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 NOVA1P51513 510 aaKnown RBP6.09□□□□□ -1.43
ATG4A-207ENST00000474825 PNLIPRP2P54317 469 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 CLDN6P56747 220 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 FOXL2P58012 376 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 EPS8Q12929 822 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 TARDBPQ13148 414 aaKnown RBP eCLIP6.09□□□□□ -1.43
ATG4A-207ENST00000474825 SSPNQ14714 243 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 TAF11Q15544 211 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 GPR68Q15743 365 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 EXT1Q16394 746 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 DECR1Q16698 335 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 MICAQ29983 383 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 RFX4Q33E94 735 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 SLC36A3Q495N2 470 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 FLYWCH1Q4VC44 716 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 MRPL2Q5T653 305 aaKnown RBP6.09□□□□□ -1.43
ATG4A-207ENST00000474825 MFSD4BQ5TF39 518 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 PLAG1Q6DJT9 500 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 FIGNL1Q6PIW4 674 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 KIRREL2Q6UWL6 708 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 CD300LDQ6UXZ3 194 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 HSDL2Q6YN16 418 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 ZNF836Q6ZNA1 936 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 SHISA6Q6ZSJ9 500 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 SLC29A4Q7RTT9 530 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 TMPRSS7Q7RTY8 843 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 STK32CQ86UX6 486 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 CYP4Z1Q86W10 505 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 DTX1Q86Y01 620 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 CHERPQ8IWX8 916 aaKnown RBP6.09□□□□□ -1.43
ATG4A-207ENST00000474825 PRSS58Q8IYP2 241 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 HS3ST5Q8IZT8 346 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 SLC34A3Q8N130 599 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 GALNT4Q8N4A0 578 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 LINC00471Q8N535 108 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 SLC15A4Q8N697 577 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 OR4C3Q8NH37 302 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 M1APQ8TC57 530 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 VPS50Q96JG6 964 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 ZNF570Q96NI8 536 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 BARD1Q99728 777 aaKnown RBP6.09□□□□□ -1.43
ATG4A-207ENST00000474825 MESP1Q9BRJ9 268 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 GPR87Q9BY21 358 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 ANKRD60Q9BZ19 345 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 MMP25Q9NPA2 562 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 EXOSC3Q9NQT5 275 aaKnown RBP6.09□□□□□ -1.43
ATG4A-207ENST00000474825 UBQLN4Q9NRR5 601 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.09□□□□□ -1.43
ATG4A-207ENST00000474825 MAN2C1Q9NTJ4 1040 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 DNAJB12Q9NXW2 375 aaKnown RBP6.09□□□□□ -1.43
ATG4A-207ENST00000474825 SMPD3Q9NY59 655 aaPredicted RBP6.09□□□□□ -1.43
ATG4A-207ENST00000474825 FOXJ2Q9P0K8 574 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 PISDQ9UG56 409 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 MRTO4Q9UKD2 239 aaKnown RBP6.09□□□□□ -1.43
ATG4A-207ENST00000474825 TCFL5Q9UL49 500 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 FARSAQ9Y285 508 aaKnown RBP6.09□□□□□ -1.43
ATG4A-207ENST00000474825 SAMHD1Q9Y3Z3 626 aaKnown RBP6.09□□□□□ -1.43
ATG4A-207ENST00000474825 FAM32AQ9Y421 112 aaKnown RBP6.09□□□□□ -1.43
ATG4A-207ENST00000474825 MAGED1Q9Y5V3 778 aaPredicted RBP6.09□□□□□ -1.43
ATG4A-207ENST00000474825 AP4B1Q9Y6B7 739 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 SPTBN2O15020 2390 aa6.09□□□□□ -1.43
ATG4A-207ENST00000474825 IGHV3-20A0A0C4DH32 117 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 TEX51A0A1B0GUA7 166 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 SPAARA0A1B0GVQ0 90 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 SH3PXD2BA1X283 911 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 CLDN24A6NM45 220 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 ALG1L2C9J202 215 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 M0R3H8 397 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 FAAHO00519 579 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 FADS1O60427 444 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 BCAS1O75363 584 aaPredicted RBP6.08□□□□□ -1.44
ATG4A-207ENST00000474825 E2F6O75461 281 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 ZFAND5O76080 213 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 GADD45GO95257 159 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 THY1P04216 161 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 H1F0P07305 194 aaKnown RBP6.08□□□□□ -1.44
ATG4A-207ENST00000474825 ITGAMP11215 1152 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 ANXA8P13928 327 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 ENDOUP21128 410 aaKnown RBP6.08□□□□□ -1.44
ATG4A-207ENST00000474825 PRKACGP22612 351 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 ELAVL4P26378 380 aaKnown RBP6.08□□□□□ -1.44
ATG4A-207ENST00000474825 ABCD3P28288 659 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 STAT5AP42229 794 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 ACAA2P42765 397 aaKnown RBP6.08□□□□□ -1.44
ATG4A-207ENST00000474825 RPS6KA3P51812 740 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 ARHGDIAP52565 204 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 DLX5P56178 289 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 MERTKQ12866 999 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 PIN1Q13526 163 aaPredicted RBP6.08□□□□□ -1.44
ATG4A-207ENST00000474825 H3F3CQ6NXT2 135 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 TMEM81Q6P7N7 255 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 ZNF613Q6PF04 617 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 APOOLQ6UXV4 268 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 LINC00114Q6XXX2 140 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 NDUFAF7Q7L592 441 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 PPP1R32Q7Z5V6 425 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 KRTAP1-3Q8IUG1 177 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 ZNF440Q8IYI8 595 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 NLGN4XQ8N0W4 816 aa6.08□□□□□ -1.44
ATG4A-207ENST00000474825 PARP8Q8N3A8 854 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms