RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 OR5M1Q8NGP8 315 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 GOT1L1Q8NHS2 421 aaPredicted RBP12.88□□□□□ -0.35
VAMP4-203ENST00000474047 B4GALNT2Q8NHY0 566 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 ZPLD1Q8TCW7 415 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 MIPOL1Q8TD10 442 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 RAB8BQ92930 207 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 THOC1Q96FV9 657 aaKnown RBP12.88□□□□□ -0.35
VAMP4-203ENST00000474047 EBF4Q9BQW3 602 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 CALHM2Q9HA72 323 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 Q9UFV3 132 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 UQCRHLA0A096LP55 91 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 IGLV3-32A0A0A0MS00 114 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 FAM234BA2RU67 622 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 H3BML4 177 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 HNRNPRO43390 633 aaKnown RBP12.88□□□□□ -0.35
VAMP4-203ENST00000474047 KRT75O95678 551 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 SNRPB2P08579 225 aaKnown RBP12.88□□□□□ -0.35
VAMP4-203ENST00000474047 COX6B1P14854 86 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 EEFSECP57772 596 aaKnown RBP12.88□□□□□ -0.35
VAMP4-203ENST00000474047 TIGD2Q4W5G0 525 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 GPAT3Q53EU6 434 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 NSUN5P2Q63ZY6 315 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 ARSKQ6UWY0 536 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 DNAJC14Q6Y2X3 702 aaPredicted RBP12.88□□□□□ -0.35
VAMP4-203ENST00000474047 RNF130Q86XS8 419 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 CHDHQ8NE62 594 aaPredicted RBP12.88□□□□□ -0.35
VAMP4-203ENST00000474047 OR9I1Q8NGQ6 314 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 SMPDL3BQ92485 455 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 TUBA1CQ9BQE3 449 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 UCK2Q9BZX2 261 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 SERHL2Q9H4I8 314 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 ZNF446Q9NWS9 450 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 DTNAQ9Y4J8 743 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 MED12Q93074 2177 aa12.87□□□□□ -0.35
VAMP4-203ENST00000474047 A0A087WZY1 265 aa12.87□□□□□ -0.35
VAMP4-203ENST00000474047 NKX2-6A6NCS4 301 aa12.87□□□□□ -0.35
VAMP4-203ENST00000474047 B4DXG7 233 aa12.87□□□□□ -0.35
VAMP4-203ENST00000474047 ADH7P40394 386 aa12.87□□□□□ -0.35
VAMP4-203ENST00000474047 CDKN2CP42773 168 aa12.87□□□□□ -0.35
VAMP4-203ENST00000474047 LHX2P50458 406 aa12.87□□□□□ -0.35
VAMP4-203ENST00000474047 RNF144AP50876 292 aaPredicted RBP12.87□□□□□ -0.35
VAMP4-203ENST00000474047 KLHL26Q53HC5 615 aa12.87□□□□□ -0.35
VAMP4-203ENST00000474047 MSANTD1Q6ZTZ1 278 aa12.87□□□□□ -0.35
VAMP4-203ENST00000474047 TMCO5AQ8N6Q1 288 aa12.87□□□□□ -0.35
VAMP4-203ENST00000474047 TNIP2Q8NFZ5 429 aa12.87□□□□□ -0.35
VAMP4-203ENST00000474047 RFWD2Q8NHY2 731 aa12.87□□□□□ -0.35
VAMP4-203ENST00000474047 MARVELD3Q96A59 401 aa12.87□□□□□ -0.35
VAMP4-203ENST00000474047 VPS33AQ96AX1 596 aa12.87□□□□□ -0.35
VAMP4-203ENST00000474047 ROPN1LQ96C74 230 aa12.87□□□□□ -0.35
VAMP4-203ENST00000474047 MKLN1Q9UL63 735 aa12.87□□□□□ -0.35
VAMP4-203ENST00000474047 CARD8Q9Y2G2 431 aa12.87□□□□□ -0.35
VAMP4-203ENST00000474047 ZNF337Q9Y3M9 751 aa12.87□□□□□ -0.35
VAMP4-203ENST00000474047 WDR45Q9Y484 360 aa12.87□□□□□ -0.35
VAMP4-203ENST00000474047 ARHGAP21Q5T5U3 1957 aa12.86□□□□□ -0.35
VAMP4-203ENST00000474047 OR2M5A3KFT3 312 aa12.86□□□□□ -0.35
VAMP4-203ENST00000474047 CD8B2A6NJW9 211 aa12.86□□□□□ -0.35
VAMP4-203ENST00000474047 DVL2O14641 736 aa12.86□□□□□ -0.35
VAMP4-203ENST00000474047 SEC14L5O43304 696 aa12.86□□□□□ -0.35
VAMP4-203ENST00000474047 ZNF708P17019 499 aa12.86□□□□□ -0.35
VAMP4-203ENST00000474047 NCF2P19878 526 aaPredicted RBP12.86□□□□□ -0.35
VAMP4-203ENST00000474047 TIMP3P35625 211 aa12.86□□□□□ -0.35
VAMP4-203ENST00000474047 B3GALT5-AS1P59052 145 aa12.86□□□□□ -0.35
VAMP4-203ENST00000474047 TXNL4AP83876 142 aaKnown RBP12.86□□□□□ -0.35
VAMP4-203ENST00000474047 CD226Q15762 336 aa12.86□□□□□ -0.35
VAMP4-203ENST00000474047 BCL2A1Q16548 175 aa12.86□□□□□ -0.35
VAMP4-203ENST00000474047 PDZK1Q5T2W1 519 aa12.86□□□□□ -0.35
VAMP4-203ENST00000474047 P4HA3Q7Z4N8 544 aa12.86□□□□□ -0.35
VAMP4-203ENST00000474047 GRAMD2AQ8IUY3 354 aa12.86□□□□□ -0.35
VAMP4-203ENST00000474047 PNPT1Q8TCS8 783 aaKnown RBP12.86□□□□□ -0.35
VAMP4-203ENST00000474047 TM9SF2Q99805 663 aa12.86□□□□□ -0.35
VAMP4-203ENST00000474047 NMUR2Q9GZQ4 415 aa12.86□□□□□ -0.35
VAMP4-203ENST00000474047 NPHS2Q9NP85 383 aa12.86□□□□□ -0.35
VAMP4-203ENST00000474047 DCTN4Q9UJW0 460 aa12.86□□□□□ -0.35
VAMP4-203ENST00000474047 PCNX3Q9H6A9 2034 aa12.86□□□□□ -0.35
VAMP4-203ENST00000474047 CLCA1A8K7I4 914 aa12.85□□□□□ -0.35
VAMP4-203ENST00000474047 FCMRO60667 390 aa12.85□□□□□ -0.35
VAMP4-203ENST00000474047 EDF1O60869 148 aaKnown RBP12.85□□□□□ -0.35
VAMP4-203ENST00000474047 CYP7B1O75881 506 aa12.85□□□□□ -0.35
VAMP4-203ENST00000474047 UBL4AP11441 157 aa12.85□□□□□ -0.35
VAMP4-203ENST00000474047 ME2P23368 584 aa12.85□□□□□ -0.35
VAMP4-203ENST00000474047 CCR4P51679 360 aa12.85□□□□□ -0.35
VAMP4-203ENST00000474047 CLDN18P56856 261 aa12.85□□□□□ -0.35
VAMP4-203ENST00000474047 SLC25A35Q3KQZ1 300 aa12.85□□□□□ -0.35
VAMP4-203ENST00000474047 ZBTB8AQ96BR9 441 aa12.85□□□□□ -0.35
VAMP4-203ENST00000474047 LRRC46Q96FV0 321 aa12.85□□□□□ -0.35
VAMP4-203ENST00000474047 RABEP2Q9H5N1 569 aa12.85□□□□□ -0.35
VAMP4-203ENST00000474047 POLE3Q9NRF9 147 aa12.85□□□□□ -0.35
VAMP4-203ENST00000474047 MED17Q9NVC6 651 aa12.85□□□□□ -0.35
VAMP4-203ENST00000474047 CCDC167Q9P0B6 97 aa12.85□□□□□ -0.35
VAMP4-203ENST00000474047 TRIM33Q9UPN9 1127 aa12.85□□□□□ -0.35
VAMP4-203ENST00000474047 LIPT1Q9Y234 373 aa12.85□□□□□ -0.35
VAMP4-203ENST00000474047 AP4B1Q9Y6B7 739 aa12.85□□□□□ -0.35
VAMP4-203ENST00000474047 CACNA1CQ13936 2221 aa12.85□□□□□ -0.35
VAMP4-203ENST00000474047 SERINC4A6NH21 518 aa12.85□□□□□ -0.35
VAMP4-203ENST00000474047 KDM4EB2RXH2 506 aaPredicted RBP12.85□□□□□ -0.35
VAMP4-203ENST00000474047 SHISA8B8ZZ34 492 aa12.85□□□□□ -0.35
VAMP4-203ENST00000474047 NR5A2O00482 541 aa12.85□□□□□ -0.35
VAMP4-203ENST00000474047 ZNF264O43296 627 aa12.85□□□□□ -0.35
VAMP4-203ENST00000474047 NR2F1P10589 423 aa12.85□□□□□ -0.35
VAMP4-203ENST00000474047 BMP5P22003 454 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms