RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 SEMA7AO75326 666 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 ITGA10O75578 1167 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 DIRAS3O95661 229 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 STARD3NLO95772 234 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 C6orf47O95873 294 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 AK1P00568 194 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 TCRBP04435 133 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 UBBP0CG47 229 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 UBCP0CG48 685 aaKnown RBP4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 MGAT1P26572 445 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 GALNSP34059 522 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 GGT2P36268 569 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 SEC61A1P61619 476 aaKnown RBP4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 RPS27AP62979 156 aaKnown RBP4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 UBA52P62987 128 aaKnown RBP4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 CRHR2Q13324 411 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 GAB1Q13480 694 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 GRB14Q14449 540 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 INPP5JQ15735 1006 aaPredicted RBP4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 NTRK2Q16620 822 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 GSG1Q2KHT4 349 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 ZNF660Q6AZW8 331 aaPredicted RBP4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 MZT2AQ6P582 158 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 NPNTQ6UXI9 565 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 ALKAL1Q6UXT8 129 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 CYHR1Q6ZMK1 362 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 CBLL1Q75N03 491 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 PEG10Q86TG7 708 aaKnown RBP4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 GPR137CQ8N3F9 429 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 FAM86B1Q8N7N1 296 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 GPR26Q8NDV2 337 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 ZNF248Q8NDW4 579 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 BEST4Q8NFU0 473 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 OR2T12Q8NG77 320 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 OR56A4Q8NGH8 313 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 PPP1R35Q8TAP8 253 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 ACOT11Q8WXI4 607 aaPredicted RBP4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 GPR78Q96P69 363 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 CBWD1Q9BRT8 395 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 SPRTNQ9H040 489 aaPredicted RBP4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 HDHD2Q9H0R4 259 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 RHOJQ9H4E5 214 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 DCP1AQ9NPI6 582 aaPredicted RBP4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 NLE1Q9NVX2 485 aaPredicted RBP4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 VNN3Q9NY84 501 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 RASL12Q9NYN1 266 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 FAM50BQ9Y247 325 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 CITO14578 2027 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 MGAMO43451 1857 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 A0A087X1B8 175 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 A0A0U1RQV5 110 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 ASPDHA6ND91 283 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 CXorf65A6NEN9 183 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 H0YIV9 168 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 GALR3O60755 368 aaPredicted RBP4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 SCN2BO60939 215 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 TOXO94900 526 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 EGFP01133 1207 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 CALCAP01258 141 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 TFP02787 698 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 ADRB2P07550 413 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 SPARCP09486 303 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 SLC35E2BP0CK96 405 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 PIPP12273 146 aaPredicted RBP4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 ZNF25P17030 456 aaPredicted RBP4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 HNF1AP20823 631 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 S1PR1P21453 382 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 CERS1P27544 350 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 PRDX5P30044 214 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 TM4SF1P30408 202 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 CSF2RBP32927 897 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 GLRBP48167 497 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 HCCSP53701 268 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 SOX8P57073 446 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 ZP1P60852 638 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 MRPS11P82912 194 aaKnown RBP4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 TSNQ15631 228 aaKnown RBP4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 SNRNP35Q16560 246 aaKnown RBP4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 PAGE3Q5JUK9 113 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 PCID2Q5JVF3 399 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 H3F3CQ6NXT2 135 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 TAPT1Q6NXT6 567 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 FAHD1Q6P587 224 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 DET1Q7L5Y6 550 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 SSX6Q7RTT6 188 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 GPR149Q86SP6 731 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 LRRC28Q86X40 367 aaPredicted RBP4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 GID4Q8IVV7 300 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 ADPRHL1Q8NDY3 354 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 OR6K3Q8NGY3 331 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 FAM162AQ96A26 154 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 MALSU1Q96EH3 234 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 MRGPRX4Q96LA9 322 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 FDXACB1Q9BRP7 624 aaPredicted RBP4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 SEC11CQ9BY50 192 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 ACPTQ9BZG2 426 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 ABCG5Q9H222 651 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 PARD6AQ9NPB6 346 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 ISYNA1Q9NPH2 558 aa4.79□□□□□ -1.64
TMEM39A-206ENST00000473684 EXOSC3Q9NQT5 275 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms