RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 HGDQ93099 445 aa8.34□□□□□ -1.07
SMC4-213ENST00000472282 SDCCAG3Q96C92 435 aa8.34□□□□□ -1.07
SMC4-213ENST00000472282 SLC35A4Q96G79 324 aa8.34□□□□□ -1.07
SMC4-213ENST00000472282 SGCZQ96LD1 299 aa8.34□□□□□ -1.07
SMC4-213ENST00000472282 COL21A1Q96P44 957 aa8.34□□□□□ -1.07
SMC4-213ENST00000472282 OR7D2Q96RA2 312 aa8.34□□□□□ -1.07
SMC4-213ENST00000472282 NODALQ96S42 347 aa8.34□□□□□ -1.07
SMC4-213ENST00000472282 ADOQ96SZ5 270 aa8.34□□□□□ -1.07
SMC4-213ENST00000472282 STACQ99469 402 aa8.34□□□□□ -1.07
SMC4-213ENST00000472282 VKORC1Q9BQB6 163 aa8.34□□□□□ -1.07
SMC4-213ENST00000472282 TTTY12Q9BZ98 90 aa8.34□□□□□ -1.07
SMC4-213ENST00000472282 PAIP1Q9H074 479 aaKnown RBP8.34□□□□□ -1.07
SMC4-213ENST00000472282 OR51I1Q9H343 314 aa8.34□□□□□ -1.07
SMC4-213ENST00000472282 PIGUQ9H490 435 aa8.34□□□□□ -1.07
SMC4-213ENST00000472282 DUSP22Q9NRW4 184 aa8.34□□□□□ -1.07
SMC4-213ENST00000472282 SACM1LQ9NTJ5 587 aa8.34□□□□□ -1.07
SMC4-213ENST00000472282 TUBA8Q9NY65 449 aaPredicted RBP8.34□□□□□ -1.07
SMC4-213ENST00000472282 LEF1Q9UJU2 399 aaPredicted RBP8.34□□□□□ -1.07
SMC4-213ENST00000472282 CNOT11Q9UKZ1 510 aaKnown RBP8.34□□□□□ -1.07
SMC4-213ENST00000472282 KCNE3Q9Y6H6 103 aa8.34□□□□□ -1.07
SMC4-213ENST00000472282 MED12Q93074 2177 aa8.34□□□□□ -1.08
SMC4-213ENST00000472282 OR6C70A6NIJ9 312 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 CCDC22O60826 627 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 KCNK2O95069 426 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 KRT75O95678 551 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 IL33O95760 270 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 P04436 131 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 ZCCHC18P0CG32 403 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 OR12D1P0DN82 309 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 CYP4B1P13584 511 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 COX6B1P14854 86 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 CNR1P21554 472 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 ADSLP30566 484 aaPredicted RBP8.33□□□□□ -1.08
SMC4-213ENST00000472282 PIGAP37287 484 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 MAGEA5P43359 124 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 KHKP50053 298 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 PNLIPRP2P54317 469 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 PPIAP62937 165 aaKnown RBP8.33□□□□□ -1.08
SMC4-213ENST00000472282 RPP38P78345 283 aaKnown RBP8.33□□□□□ -1.08
SMC4-213ENST00000472282 PLGLB1Q02325 96 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 FOXO1Q12778 655 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 EFR3AQ14156 821 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 MAPRE2Q15555 327 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 DCST2Q5T1A1 773 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 LRIF1Q5T3J3 769 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 CCNJQ5T5M9 372 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 NUP54Q7Z3B4 507 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 PIGWQ7Z7B1 504 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 ZAR1Q86SH2 424 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 DHDDSQ86SQ9 333 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 MTDHQ86UE4 582 aaKnown RBP8.33□□□□□ -1.08
SMC4-213ENST00000472282 SNX32Q86XE0 403 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 RNF130Q86XS8 419 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 MSRB3Q8IXL7 192 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 INTS1Q8N201 2190 aaKnown RBP8.33□□□□□ -1.08
SMC4-213ENST00000472282 TMEM251Q8N6I4 163 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 POU5F2Q8N7G0 328 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 SPPL2AQ8TCT8 520 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 MIPOL1Q8TD10 442 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 TSPEARQ8WU66 669 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 RAB8BQ92930 207 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 CCT8L2Q96SF2 557 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 BTBD2Q9BX70 525 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 ZDHHC11Q9H8X9 412 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 TPT1P8Q9HAU6 139 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 PROK2Q9HC23 129 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 SH2D2AQ9NP31 389 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 CHST11Q9NPF2 352 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 PNPLA3Q9NST1 481 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 FBXO34Q9NWN3 711 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 SLC25A37Q9NYZ2 338 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 FLRT3Q9NZU0 649 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 CNIH4Q9P003 139 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 VAPAQ9P0L0 249 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 SLAMF8Q9P0V8 285 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 MRTO4Q9UKD2 239 aaKnown RBP8.33□□□□□ -1.08
SMC4-213ENST00000472282 NDUFAF1Q9Y375 327 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 PCDHB14Q9Y5E9 798 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 MPDZO75970 2070 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 FBN2P35556 2912 aa8.33□□□□□ -1.08
SMC4-213ENST00000472282 TRBV5-3A0A0A0MS03 114 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 NKX2-6A6NCS4 301 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 PRAMEF25A6NGN4 478 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 NPIPA2E9PIF3 369 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 NPIPA3F8WFD2 350 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 FBP2O00757 339 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 SLC22A2O15244 555 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 PAX4O43316 350 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 SCO2O43819 266 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 ICOSLGO75144 302 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 SMNDC1O75940 238 aaKnown RBP eCLIP8.32□□□□□ -1.082e-16■■■■■ 67.6
SMC4-213ENST00000472282 FAM107AO95990 144 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 RFPL3SP0C7P2 107 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 ENDOUP21128 410 aaKnown RBP8.32□□□□□ -1.08
SMC4-213ENST00000472282 CASP3P42574 277 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 ANXA11P50995 505 aaKnown RBP8.32□□□□□ -1.08
SMC4-213ENST00000472282 MVDP53602 400 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 PSMD4P55036 377 aaKnown RBP8.32□□□□□ -1.08
SMC4-213ENST00000472282 NUP107P57740 925 aa8.32□□□□□ -1.08
SMC4-213ENST00000472282 KCNJ2P63252 427 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms