RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 GAS1P54826 345 aa17.57■□□□□ 0.4
PSPC1-203ENST00000471658 HOXC5Q00444 222 aa17.57■□□□□ 0.4
PSPC1-203ENST00000471658 INPP5JQ15735 1006 aaPredicted RBP17.57■□□□□ 0.4
PSPC1-203ENST00000471658 RTL4Q6ZR62 310 aa17.57■□□□□ 0.4
PSPC1-203ENST00000471658 CATSPER1Q8NEC5 780 aa17.57■□□□□ 0.4
PSPC1-203ENST00000471658 VANGL1Q8TAA9 524 aaPredicted RBP17.57■□□□□ 0.4
PSPC1-203ENST00000471658 RNF145Q96MT1 663 aa17.57■□□□□ 0.4
PSPC1-203ENST00000471658 PRR14Q9BWN1 585 aa17.57■□□□□ 0.4
PSPC1-203ENST00000471658 TRIM45Q9H8W5 580 aaPredicted RBP17.57■□□□□ 0.4
PSPC1-203ENST00000471658 KLRF1Q9NZS2 232 aa17.57■□□□□ 0.4
PSPC1-203ENST00000471658 ANAPC2Q9UJX6 822 aa17.57■□□□□ 0.4
PSPC1-203ENST00000471658 BAG5Q9UL15 447 aa17.57■□□□□ 0.4
PSPC1-203ENST00000471658 AURKCQ9UQB9 309 aa17.57■□□□□ 0.4
PSPC1-203ENST00000471658 CSAG2Q9Y5P2 127 aa17.57■□□□□ 0.4
PSPC1-203ENST00000471658 MGAQ8IWI9 3026 aa17.56■□□□□ 0.4
PSPC1-203ENST00000471658 DHRS12A0PJE2 317 aa17.56■□□□□ 0.4
PSPC1-203ENST00000471658 CDHR4A6H8M9 788 aa17.56■□□□□ 0.4
PSPC1-203ENST00000471658 TMEM8BA6NDV4 472 aa17.56■□□□□ 0.4
PSPC1-203ENST00000471658 CYP7B1O75881 506 aa17.56■□□□□ 0.4
PSPC1-203ENST00000471658 CSTAP01040 98 aa17.56■□□□□ 0.4
PSPC1-203ENST00000471658 MT-ND1P03886 318 aa17.56■□□□□ 0.4
PSPC1-203ENST00000471658 UBTFL6P0CB48 400 aaPredicted RBP17.56■□□□□ 0.4
PSPC1-203ENST00000471658 GKN3PP0CG01 181 aa17.56■□□□□ 0.4
PSPC1-203ENST00000471658 OR1C1Q15619 314 aa17.56■□□□□ 0.4
PSPC1-203ENST00000471658 SLC22A10Q63ZE4 541 aa17.56■□□□□ 0.4
PSPC1-203ENST00000471658 OR5M10Q6IEU7 315 aa17.56■□□□□ 0.4
PSPC1-203ENST00000471658 DND1Q8IYX4 353 aaKnown RBP17.56■□□□□ 0.4
PSPC1-203ENST00000471658 DUSP19Q8WTR2 217 aa17.56■□□□□ 0.4
PSPC1-203ENST00000471658 PYDC1Q8WXC3 89 aa17.56■□□□□ 0.4
PSPC1-203ENST00000471658 LZICQ8WZA0 190 aa17.56■□□□□ 0.4
PSPC1-203ENST00000471658 SLC47A1Q96FL8 570 aa17.56■□□□□ 0.4
PSPC1-203ENST00000471658 SGCZQ96LD1 299 aa17.56■□□□□ 0.4
PSPC1-203ENST00000471658 HES7Q9BYE0 225 aa17.56■□□□□ 0.4
PSPC1-203ENST00000471658 CARD8Q9Y2G2 431 aa17.56■□□□□ 0.4
PSPC1-203ENST00000471658 ANKRD11Q6UB99 2663 aaPredicted RBP17.56■□□□□ 0.4
PSPC1-203ENST00000471658 A0A1W2PQD3 144 aa17.55■□□□□ 0.4
PSPC1-203ENST00000471658 B4DXG7 233 aa17.55■□□□□ 0.4
PSPC1-203ENST00000471658 K7EM74 188 aa17.55■□□□□ 0.4
PSPC1-203ENST00000471658 NDUFB5O43674 189 aa17.55■□□□□ 0.4
PSPC1-203ENST00000471658 GMFGO60234 142 aa17.55■□□□□ 0.4
PSPC1-203ENST00000471658 ADAM11O75078 769 aa17.55■□□□□ 0.4
PSPC1-203ENST00000471658 SEMG1P04279 462 aa17.55■□□□□ 0.4
PSPC1-203ENST00000471658 PRG2P13727 222 aa17.55■□□□□ 0.4
PSPC1-203ENST00000471658 CASRP41180 1078 aa17.55■□□□□ 0.4
PSPC1-203ENST00000471658 IFI44LQ53G44 452 aa17.55■□□□□ 0.4
PSPC1-203ENST00000471658 RNF220Q5VTB9 566 aa17.55■□□□□ 0.4
PSPC1-203ENST00000471658 CBLN3Q6UW01 205 aa17.55■□□□□ 0.4
PSPC1-203ENST00000471658 IGFL2Q6UWQ7 119 aa17.55■□□□□ 0.4
PSPC1-203ENST00000471658 TSEN54Q7Z6J9 526 aaKnown RBP17.55■□□□□ 0.4
PSPC1-203ENST00000471658 LSRQ86X29 649 aaPredicted RBP17.55■□□□□ 0.4
PSPC1-203ENST00000471658 CARM1Q86X55 608 aa17.55■□□□□ 0.4
PSPC1-203ENST00000471658 GPALPP1Q8IXQ4 340 aa17.55■□□□□ 0.4
PSPC1-203ENST00000471658 SNRNP27Q8WVK2 155 aaKnown RBP17.55■□□□□ 0.4
PSPC1-203ENST00000471658 RASSF5Q8WWW0 418 aa17.55■□□□□ 0.4
PSPC1-203ENST00000471658 PROX1Q92786 737 aa17.55■□□□□ 0.4
PSPC1-203ENST00000471658 HAS2Q92819 552 aa17.55■□□□□ 0.4
PSPC1-203ENST00000471658 SH3YL1Q96HL8 342 aaPredicted RBP17.55■□□□□ 0.4
PSPC1-203ENST00000471658 SMAD5Q99717 465 aaKnown RBP17.55■□□□□ 0.4
PSPC1-203ENST00000471658 ARHGDIGQ99819 225 aa17.55■□□□□ 0.4
PSPC1-203ENST00000471658 DNAJB12Q9NXW2 375 aaKnown RBP17.55■□□□□ 0.4
PSPC1-203ENST00000471658 ABCG2Q9UNQ0 655 aa17.55■□□□□ 0.4
PSPC1-203ENST00000471658 PTPRQQ9UMZ3 2332 aa17.55■□□□□ 0.4
PSPC1-203ENST00000471658 A0A0G2JMM0 328 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 A0A1W2PPB8 328 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 A0A1W2PRS3 328 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 OR5H15A6NDH6 313 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 KIR3DP1A8MWS1 328 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 GTPBP1O00178 669 aaKnown RBP17.54■□□□□ 0.4
PSPC1-203ENST00000471658 PDGFAP04085 211 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 ADH7P40394 386 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 CD97P48960 835 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 ARG2P78540 354 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 NPTX1Q15818 432 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 NRF1Q16656 503 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 GOLM1Q8NBJ4 401 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 PSD4Q8NDX1 1056 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 OR6T1Q8NGN1 323 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 C7orf34Q96L11 122 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 SECISBP2Q96T21 854 aaKnown RBP17.54■□□□□ 0.4
PSPC1-203ENST00000471658 OSBPL11Q9BXB4 747 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 UGT2B28Q9BY64 529 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 AMBRA1Q9C0C7 1298 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 ZMIZ1Q9ULJ6 1067 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 NTNG1Q9Y2I2 539 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 H0YHG0 523 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 hCG_2039718K7EN88 272 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 SYT5O00445 386 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 TPST2O60704 377 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 KRT36O76013 467 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 GPIP06744 558 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 UMPSP11172 480 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 UBL4AP11441 157 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 YAP1P46937 504 aaKnown RBP17.54■□□□□ 0.4
PSPC1-203ENST00000471658 CLK3P49761 638 aaKnown RBP17.54■□□□□ 0.4
PSPC1-203ENST00000471658 VLDLRP98155 873 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 ZNF117Q03924 483 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 CHRNB3Q05901 458 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 MDS2Q8NDY4 140 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 NTNG2Q96CW9 530 aa17.54■□□□□ 0.4
PSPC1-203ENST00000471658 ANGPTL4Q9BY76 406 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms