RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 SELENONQ9NZV5 590 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 RPS6KB2Q9UBS0 482 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 REV1Q9UBZ9 1251 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 C19orf25Q9UFG5 118 aaPredicted RBP8.64□□□□□ -1.03
SMC1A-205ENST00000469129 MKL2Q9ULH7 1088 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 SLC7A7Q9UM01 511 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 DTX4Q9Y2E6 619 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 PCDHGB1Q9Y5G3 927 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 R4GN57 208 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 CENPVL1A0A0U1RR11 272 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 IRGMA1A4Y4 181 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 EFCAB10A6NFE3 127 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 SNTNA6NMZ2 147 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 EFCAB7A8K855 629 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 PROB1E7EW31 1015 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 NPIPB9F8W1W9 429 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 HRKO00198 91 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 NTN3O00634 580 aaPredicted RBP8.63□□□□□ -1.03
SMC1A-205ENST00000469129 HYAL3O43820 417 aaPredicted RBP8.63□□□□□ -1.03
SMC1A-205ENST00000469129 OR6B1O95007 311 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 SOX14O95416 240 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 LDOC1O95751 146 aaPredicted RBP8.63□□□□□ -1.03
SMC1A-205ENST00000469129 IL33O95760 270 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 ONECUT2O95948 504 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 IGKV3-11P04433 115 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 HEXBP07686 556 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 FGF5P12034 268 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 PIPP12273 146 aaPredicted RBP8.63□□□□□ -1.03
SMC1A-205ENST00000469129 HPGDP15428 266 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 GABRB1P18505 474 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 ACP1P24666 158 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 IL12BP29460 328 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 HOXD11P31277 338 aaPredicted RBP8.63□□□□□ -1.03
SMC1A-205ENST00000469129 RBM34P42696 430 aaKnown RBP8.63□□□□□ -1.03
SMC1A-205ENST00000469129 FOXD4Q12950 439 aaPredicted RBP8.63□□□□□ -1.03
SMC1A-205ENST00000469129 COL9A2Q14055 689 aaPredicted RBP8.63□□□□□ -1.03
SMC1A-205ENST00000469129 RAB39AQ14964 217 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 OR1Q1Q15612 314 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 NKAIN1Q4KMZ8 207 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 VWA2Q5GFL6 755 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 TMEM201Q5SNT2 666 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 MEDAGQ5VYS4 303 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 B3GNT6Q6ZMB0 384 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 Q6ZPB1 254 aaPredicted RBP8.63□□□□□ -1.03
SMC1A-205ENST00000469129 COX15Q7KZN9 410 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 ZER1Q7Z7L7 766 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 CLVS1Q8IUQ0 354 aaPredicted RBP8.63□□□□□ -1.03
SMC1A-205ENST00000469129 CYP4Z2PQ8N1L4 340 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 SLC43A2Q8N370 569 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 RCBTB1Q8NDN9 531 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 C17orf47Q8NEP4 570 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 OR8J1Q8NGP2 316 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 OR1N1Q8NGS0 311 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 OR13F1Q8NGS4 319 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 OR2I1PQ8NGU4 316 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 C9orf43Q8TAL5 461 aaPredicted RBP8.63□□□□□ -1.03
SMC1A-205ENST00000469129 ZNF721Q8TF20 911 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 METTL21AQ8WXB1 218 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 RORBQ92753 470 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 OSTF1Q92882 214 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 MUL1Q969V5 352 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 HSPBAP1Q96EW2 488 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 SLC38A2Q96QD8 506 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 COPS4Q9BT78 406 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 POLDIP3Q9BY77 421 aaKnown RBP8.63□□□□□ -1.03
SMC1A-205ENST00000469129 SLC26A1Q9H2B4 701 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 TBC1D23Q9NUY8 699 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 FBXO34Q9NWN3 711 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 AKAP7Q9P0M2 348 aaPredicted RBP8.63□□□□□ -1.03
SMC1A-205ENST00000469129 KCNE5Q9UJ90 142 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 NXT1Q9UKK6 140 aaKnown RBP8.63□□□□□ -1.03
SMC1A-205ENST00000469129 CEPT1Q9Y6K0 416 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 SDK1Q7Z5N4 2213 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 DMDP11532 3685 aa8.63□□□□□ -1.03
SMC1A-205ENST00000469129 VPS13AQ96RL7 3174 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 A0A0B4J2E0 115 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 C2orf92A0A1B0GVN3 265 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 A0A1B0GX12 115 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 HTR3EA5X5Y0 456 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 SERINC4A6NH21 518 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 SAGE2PA6NJ88 616 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 CLDN24A6NM45 220 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 CLCA1A8K7I4 914 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 A8MUA0 341 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 ZNF99A8MXY4 864 aaPredicted RBP8.62□□□□□ -1.03
SMC1A-205ENST00000469129 PTGES3LE9PB15 166 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 SCDO00767 359 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 TO15178 435 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 GFRA3O60609 400 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 SEC14L2O76054 403 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 DDAH2O95865 285 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 CSTAP01040 98 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 IGKV1D-16P01601 117 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 HTR1AP08908 422 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 ZGLP1P0C6A0 271 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 GKN3PP0CG01 181 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 DCKP27707 260 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 HTR2AP28223 471 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 GSTT1P30711 240 aa8.62□□□□□ -1.03
SMC1A-205ENST00000469129 ADH7P40394 386 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms