RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 BCORP1Q8N888 145 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 CHDHQ8NE62 594 aaPredicted RBP6.33□□□□□ -1.4
SCAF4-204ENST00000467731 HIPK4Q8NE63 616 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 TMBIM1Q969X1 311 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 TP53INP1Q96A56 240 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 TRNT1Q96Q11 434 aaKnown RBP6.33□□□□□ -1.4
SCAF4-204ENST00000467731 ZNF184Q99676 751 aaPredicted RBP6.33□□□□□ -1.4
SCAF4-204ENST00000467731 TREX2Q9BQ50 279 aaPredicted RBP6.33□□□□□ -1.4
SCAF4-204ENST00000467731 SLC38A1Q9H2H9 487 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 IFT22Q9H7X7 185 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 ATP13A2Q9NQ11 1180 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 MKLN1Q9UL63 735 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 LIPT1Q9Y234 373 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 POLHQ9Y253 713 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 RAXQ9Y2V3 346 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 HEATR5AQ86XA9 2040 aa6.33□□□□□ -1.4
SCAF4-204ENST00000467731 CXCR6O00574 342 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 TO15178 435 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 GSTA4O15217 222 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 ACOX3O15254 700 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 RRP8O43159 456 aaKnown RBP6.32□□□□□ -1.4
SCAF4-204ENST00000467731 ITGA10O75578 1167 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 PGM3O95394 542 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 ITGA3P26006 1051 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 NRG3P56975 720 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 TLE3Q04726 772 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 PLCXD2Q0VAA5 305 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 BNIP2Q12982 314 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 DECR1Q16698 335 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 CYP27C1Q4G0S4 372 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 CLVS2Q5SYC1 327 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 SHEQ5VZ18 495 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 B3GNTL1Q67FW5 361 aaPredicted RBP6.32□□□□□ -1.4
SCAF4-204ENST00000467731 GLYATQ6IB77 296 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 UNQ6494/PRO21346Q6UXR6 183 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 CYP2R1Q6VVX0 501 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 FRRS1Q6ZNA5 592 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 ZNF704Q6ZNC4 412 aaPredicted RBP6.32□□□□□ -1.4
SCAF4-204ENST00000467731 ZAR1Q86SH2 424 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 PSMF1Q92530 271 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 ZG16BQ96DA0 208 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 RASL10BQ96S79 203 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 ZNF350Q9GZX5 532 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 QRSL1Q9H0R6 528 aaKnown RBP6.32□□□□□ -1.4
SCAF4-204ENST00000467731 ING2Q9H160 280 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 CDCP1Q9H5V8 836 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 PFDN2Q9UHV9 154 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 ANGPT4Q9Y264 503 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 WDR45Q9Y484 360 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 SNX13Q9Y5W8 968 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 PCNX3Q9H6A9 2034 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 SMG1Q96Q15 3661 aaKnown RBP6.32□□□□□ -1.4
SCAF4-204ENST00000467731 H3BUI4 141 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 ACOT8O14734 319 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 STX11O75558 287 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 GCM2O75603 506 aaPredicted RBP6.32□□□□□ -1.4
SCAF4-204ENST00000467731 DNAJB5O75953 348 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 AK1P00568 194 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 ERFP50548 548 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 RRADP55042 308 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 P2RX3P56373 397 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 PCBP3P57721 371 aaKnown RBP6.32□□□□□ -1.4
SCAF4-204ENST00000467731 RELQ04864 619 aaPredicted RBP6.32□□□□□ -1.4
SCAF4-204ENST00000467731 RAPSNQ13702 412 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 FLOT2Q14254 428 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 GPR68Q15743 365 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 C1orf146Q5VVC0 180 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 DESI1Q6ICB0 168 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 TYW3Q6IPR3 259 aaKnown RBP6.32□□□□□ -1.4
SCAF4-204ENST00000467731 LRRC74BQ6ZQY2 392 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 ERMP1Q7Z2K6 904 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 HMGN2P46Q86SG4 172 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 RPS19BP1Q86WX3 136 aaKnown RBP6.32□□□□□ -1.4
SCAF4-204ENST00000467731 TAGAPQ8N103 731 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 GALNT16Q8N428 558 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 SLC5A8Q8N695 610 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 FAM110BQ8TC76 370 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 DIO2Q92813 273 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 OMA1Q96E52 524 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 ADOQ96SZ5 270 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 LHPPQ9H008 270 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 TBC1D23Q9NUY8 699 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 ACTR3BQ9P1U1 418 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 MAGEL2Q9UJ55 1249 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 TMEM5Q9Y2B1 443 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 NPFFR2Q9Y5X5 522 aa6.32□□□□□ -1.4
SCAF4-204ENST00000467731 MAP1BP46821 2468 aaKnown RBP6.32□□□□□ -1.4
SCAF4-204ENST00000467731 DSPPQ9NZW4 1301 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 NPIPA5A0A0B4J1W7 369 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 NPIPA7E9PJI5 369 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 RGS13O14921 159 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 GMNNO75496 209 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 REM1O75628 298 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 NADKO95544 446 aaPredicted RBP6.31□□□□□ -1.4
SCAF4-204ENST00000467731 OPN1SWP03999 348 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 ALPPP05187 535 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 NPIPA8P0DM63 369 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 ATP6V1B2P21281 511 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 ITPKBP27987 946 aa6.31□□□□□ -1.4
SCAF4-204ENST00000467731 CRYBA2P53672 197 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms