RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	BLOC1S6	Q9UL45	172 aa		11.34	□□□□□ -0.59
HDLBP-231	ENST00000467435	PCDHGA6	Q9Y5G7	932 aa		11.34	□□□□□ -0.59
HDLBP-231	ENST00000467435	ZNF318	Q5VUA4	2279 aa		11.34	□□□□□ -0.59
HDLBP-231	ENST00000467435	NCOR1	O75376	2440 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	SERINC4	A6NH21	518 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	ZAR1L	A6NP61	321 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	TNFRSF10A	O00220	468 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	T	O15178	435 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	PIP5K1C	O60331	668 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	UTS2	O95399	124 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	SOX14	O95416	240 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	NTN1	O95631	604 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	ANGPTL1	O95841	491 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	GSTM3	P21266	225 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	CHM	P24386	653 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	CRHBP	P24387	322 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	KRT20	P35900	424 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	ETV5	P41161	510 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	RPL5	P46777	297 aa	Known RBP	11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	GPR143	P51810	404 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	NR0B1	P51843	470 aa	Known RBP	11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	LSM11	P83369	360 aa	Known RBP eCLIP	11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	PLCXD2	Q0VAA5	305 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	CDK5R2	Q13319	367 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	RRM2B	Q7LG56	351 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	ZNF550	Q7Z398	422 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	CPEB2	Q7Z5Q1	589 aa	Known RBP	11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	ZER1	Q7Z7L7	766 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	SLCO6A1	Q86UG4	719 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	ENTHD1	Q8IYW4	607 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	PRR22	Q8IZ63	422 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	NLGN4X	Q8N0W4	816 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	SLC34A3	Q8N130	599 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	DEPDC4	Q8N2C3	294 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	ZNF441	Q8N8Z8	693 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	C17orf47	Q8NEP4	570 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	B3GNT7	Q8NFL0	401 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	GNPDA2	Q8TDQ7	276 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	TMEM255B	Q8WV15	326 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	ZNF566	Q969W8	418 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	ARSG	Q96EG1	525 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	VMP1	Q96GC9	406 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	MESP1	Q9BRJ9	268 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	SEMA4C	Q9C0C4	833 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	TMEM27	Q9HBJ8	222 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	ZNF223	Q9UK11	482 aa	Predicted RBP	11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	RNF6	Q9Y252	685 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	SLC35A3	Q9Y2D2	325 aa		11.33	□□□□□ -0.6
HDLBP-231	ENST00000467435	CDC14C	A4D256	554 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	TRIM64C	A6NLI5	447 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	C4orf47	A7E2U8	309 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435		H3BN98	237 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	TMX2-CTNND1	H3BSU7	103 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	SCD	O00767	359 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	ABCB7	O75027	752 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	CS	O75390	466 aa	Known RBP	11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	REM1	O75628	298 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	LYPD3	O95274	346 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	CSTA	P01040	98 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	TFAP2A	P05549	437 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	HPGD	P15428	266 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	EEF1B2	P24534	225 aa	Known RBP	11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	POU1F1	P28069	291 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	LCN1	P31025	176 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	FMO3	P31513	532 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	OMP	P47874	163 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	IDH2	P48735	452 aa	Known RBP	11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	NR1H2	P55055	460 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	RAB15	P59190	212 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	CDC42	P60953	191 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	RNF4	P78317	190 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	PSPH	P78330	225 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	ALDH6A1	Q02252	535 aa	Known RBP	11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	PTGES3	Q15185	160 aa	Known RBP	11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	CSRP2	Q16527	193 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	NDUFAF6	Q330K2	333 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	KLHL26	Q53HC5	615 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	DCAF12	Q5T6F0	453 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	CDCP2	Q5VXM1	449 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	FAM199X	Q6PEV8	388 aa	Predicted RBP	11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	ZNF613	Q6PF04	617 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	ZNF773	Q6PK81	442 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	TMEM205	Q6UW68	189 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	CD300LD	Q6UXZ3	194 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	MBOAT2	Q6ZWT7	520 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	PRICKLE2	Q7Z3G6	844 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	SATL1	Q86VE3	508 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	MEX3D	Q86XN8	651 aa	Known RBP	11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	NRM	Q8IXM6	262 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	GATS	Q8NAP1	163 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	GALNT6	Q8NCL4	622 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	NFAM1	Q8NET5	270 aa	Predicted RBP	11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	OR4C3	Q8NH37	302 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	RNF217	Q8TC41	542 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	GRHL3	Q8TE85	626 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	APH1B	Q8WW43	257 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	OMA1	Q96E52	524 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	HSPBAP1	Q96EW2	488 aa		11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	FAM46A	Q96IP4	442 aa	Known RBP	11.32	□□□□□ -0.6
HDLBP-231	ENST00000467435	LPAR4	Q99677	370 aa		11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms