RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 CMTM3Q96MX0 182 aa18.41■□□□□ 0.54
SDF4-205ENST00000465727 LINC00052Q96N35 136 aa18.41■□□□□ 0.54
SDF4-205ENST00000465727 PITHD1Q9GZP4 211 aaPredicted RBP18.41■□□□□ 0.54
SDF4-205ENST00000465727 KLHL1Q9NR64 748 aa18.41■□□□□ 0.54
SDF4-205ENST00000465727 SPG21Q9NZD8 308 aa18.41■□□□□ 0.54
SDF4-205ENST00000465727 ACSL5Q9ULC5 683 aa18.41■□□□□ 0.54
SDF4-205ENST00000465727 TRAV1-2A0A0B4J238 106 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 C17orf113A0A1B0GUU1 675 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 GSAPA4D1B5 854 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 TOXO94900 526 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 SLC2A10O95528 541 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 HPXP02790 462 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 TAS2R38P59533 333 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 MAPK14Q16539 360 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 ZSWIM7Q19AV6 140 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 SLC25A35Q3KQZ1 300 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 FAM27D1Q5T7N8 215 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 OLIG3Q7RTU3 272 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 SPICQ8N5J4 248 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 ZNF527Q8NB42 609 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 SGTBQ96EQ0 304 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 SFXN2Q96NB2 322 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 ZFP3Q96NJ6 502 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 VN1R3Q9BXE9 311 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 MFRPQ9BY79 579 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 TMPRSS13Q9BYE2 586 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 WDR26Q9H7D7 661 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 SLC35C2Q9NQQ7 365 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 NPDC1Q9NQX5 325 aaPredicted RBP18.4■□□□□ 0.54
SDF4-205ENST00000465727 MRPL17Q9NRX2 175 aaKnown RBP18.4■□□□□ 0.54
SDF4-205ENST00000465727 KLHL28Q9NXS3 571 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 CALML5Q9NZT1 146 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 NAP1L6A6NFF2 107 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 OR6C65A6NJZ3 312 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 NDUFS4O43181 175 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 LEFTY1O75610 366 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 WNT1P04628 370 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 TYRP14679 529 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 CPN1P15169 458 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 TYRP1P17643 537 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 KELP23276 732 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 ACADLP28330 430 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 GPR4P46093 362 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 TFAP2EQ6VUC0 442 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 KANSL1Q7Z3B3 1105 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 HMGN2P46Q86SG4 172 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 TRAPPC5Q8IUR0 188 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 OR6M1Q8NGM8 313 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 OR51Q1Q8NH59 317 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 CXorf40AQ8TE69 158 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 SORCS1Q8WY21 1168 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 IFT27Q9BW83 186 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 ZCCHC4Q9H5U6 513 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 LDAHQ9H6V9 325 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 WASH6PQ9NQA3 447 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 NANSQ9NR45 359 aa18.4■□□□□ 0.54
SDF4-205ENST00000465727 PLSCR5A0PG75 271 aa18.39■□□□□ 0.53
SDF4-205ENST00000465727 ANKRD61A6NGH8 418 aa18.39■□□□□ 0.53
SDF4-205ENST00000465727 A8MXK9 166 aa18.39■□□□□ 0.53
SDF4-205ENST00000465727 GIPP09681 153 aaPredicted RBP18.39■□□□□ 0.53
SDF4-205ENST00000465727 ANKRD34CP0C6C1 535 aa18.39■□□□□ 0.53
SDF4-205ENST00000465727 ELFN1P0C7U0 828 aa18.39■□□□□ 0.53
SDF4-205ENST00000465727 CTGFP29279 349 aa18.39■□□□□ 0.53
SDF4-205ENST00000465727 NCBP2P52298 156 aaKnown RBP eCLIP18.39■□□□□ 0.532e-6■■□□□ 13
SDF4-205ENST00000465727 ZNF273Q14593 569 aa18.39■□□□□ 0.53
SDF4-205ENST00000465727 TUSC1Q2TAM9 212 aa18.39■□□□□ 0.53
SDF4-205ENST00000465727 ELFN2Q5R3F8 820 aa18.39■□□□□ 0.53
SDF4-205ENST00000465727 RGS7BPQ6MZT1 257 aaPredicted RBP18.39■□□□□ 0.53
SDF4-205ENST00000465727 LIPIQ6XZB0 460 aa18.39■□□□□ 0.53
SDF4-205ENST00000465727 NRMQ8IXM6 262 aa18.39■□□□□ 0.53
SDF4-205ENST00000465727 SDR16C5Q8N3Y7 309 aa18.39■□□□□ 0.53
SDF4-205ENST00000465727 TMEM99Q8N816 258 aa18.39■□□□□ 0.53
SDF4-205ENST00000465727 OR56A1Q8NGH5 318 aa18.39■□□□□ 0.53
SDF4-205ENST00000465727 OR10Z1Q8NGY1 313 aa18.39■□□□□ 0.53
SDF4-205ENST00000465727 BRIX1Q8TDN6 353 aaKnown RBP18.39■□□□□ 0.53
SDF4-205ENST00000465727 POF1BQ8WVV4 589 aa18.39■□□□□ 0.53
SDF4-205ENST00000465727 DDOQ99489 341 aa18.39■□□□□ 0.53
SDF4-205ENST00000465727 UBQLN3Q9H347 655 aa18.39■□□□□ 0.53
SDF4-205ENST00000465727 OR6C2Q9NZP2 312 aa18.39■□□□□ 0.53
SDF4-205ENST00000465727 L7N2F9 121 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 OR5F1O95221 314 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 ECDO95905 644 aaPredicted RBP18.38■□□□□ 0.53
SDF4-205ENST00000465727 SERPINA3P01011 423 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 TFP02787 698 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 HMGN2P05204 90 aaKnown RBP18.38■□□□□ 0.53
SDF4-205ENST00000465727 ICAM2P13598 275 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 PRKAR1BP31321 381 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 CCR8P51685 355 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 LASP1Q14847 261 aaKnown RBP18.38■□□□□ 0.53
SDF4-205ENST00000465727 PLBD1Q6P4A8 553 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 NKAIN4Q8IVV8 208 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 CRIPAKQ8N1N5 446 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 ZNF514Q96K75 400 aaPredicted RBP18.38■□□□□ 0.53
SDF4-205ENST00000465727 LINC00615Q96LM1 132 aaPredicted RBP18.38■□□□□ 0.53
SDF4-205ENST00000465727 PLEKHA1Q9HB21 404 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 PFDN2Q9UHV9 154 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 SPATA2Q9UM82 520 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 MRPS7Q9Y2R9 242 aaKnown RBP18.38■□□□□ 0.53
SDF4-205ENST00000465727 INSL5Q9Y5Q6 135 aa18.38■□□□□ 0.53
SDF4-205ENST00000465727 DENND4CQ5VZ89 1909 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms