RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 ABTB1Q969K4 478 aaPredicted RBP10.58□□□□□ -0.72
CUX1-207ENST00000465461 MAL2Q969L2 176 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 ZNF524Q96C55 264 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 CCDC120Q96HB5 630 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 OR2B2Q9GZK3 357 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 HOXD1Q9GZZ0 328 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.58□□□□□ -0.72
CUX1-207ENST00000465461 LEF1Q9UJU2 399 aaPredicted RBP10.58□□□□□ -0.72
CUX1-207ENST00000465461 CARD8Q9Y2G2 431 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 MEMO1Q9Y316 297 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 DTNAQ9Y4J8 743 aa10.58□□□□□ -0.72
CUX1-207ENST00000465461 MYO7BQ6PIF6 2116 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 TRBV5-3A0A0A0MS03 114 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 A0A1W2PQD3 144 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 A1L4Q6 167 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 SERINC4A6NH21 518 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 GTPBP1O00178 669 aaKnown RBP10.57□□□□□ -0.72
CUX1-207ENST00000465461 BCKDKO14874 412 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 HCRTR2O43614 444 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 KIAA0513O60268 411 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 CYP7B1O75881 506 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 SOX30O94993 753 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 AGR2O95994 175 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 OPN1LWP04000 364 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 TFPTP0C1Z6 253 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 LCN1P31025 176 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 IRX1P78414 480 aaPredicted RBP10.57□□□□□ -0.72
CUX1-207ENST00000465461 ADORA2A-AS1P86434 159 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 NFYCQ13952 458 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 TOMM34Q15785 309 aaPredicted RBP10.57□□□□□ -0.72
CUX1-207ENST00000465461 ZNF141Q15928 474 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 WLSQ5T9L3 541 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 RAET1LQ5VY80 246 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 VASNQ6EMK4 673 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 RTL6Q6ICC9 239 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 CPLX4Q7Z7G2 160 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 DHDDSQ86SQ9 333 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 IFNEQ86WN2 208 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 SNX32Q86XE0 403 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 ZNF619Q8N2I2 560 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 POU5F2Q8N7G0 328 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 ZNF527Q8NB42 609 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 B4GALNT2Q8NHY0 566 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 SSC4DQ8WTU2 575 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 SARAFQ96BY9 339 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 C1GALT1C1Q96EU7 318 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 SFXN2Q96NB2 322 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 SLC39A3Q9BRY0 314 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 SLC38A1Q9H2H9 487 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 PTGES2Q9H7Z7 377 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 TMEM45AQ9NWC5 275 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 CAMK2AQ9UQM7 478 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 POLEQ07864 2286 aa10.57□□□□□ -0.72
CUX1-207ENST00000465461 GCN1Q92616 2671 aaKnown RBP10.57□□□□□ -0.72
CUX1-207ENST00000465461 HELZ2Q9BYK8 2649 aaKnown RBP10.56□□□□□ -0.72
CUX1-207ENST00000465461 PRRC2CQ9Y520 2896 aaKnown RBP10.56□□□□□ -0.72
CUX1-207ENST00000465461 RP1L1Q8IWN7 2480 aaPredicted RBP10.56□□□□□ -0.72
CUX1-207ENST00000465461 IGLV3-32A0A0A0MS00 114 aa10.56□□□□□ -0.72
CUX1-207ENST00000465461 OR14I1A6ND48 311 aa10.56□□□□□ -0.72
CUX1-207ENST00000465461 H0YC42 278 aa10.56□□□□□ -0.72
CUX1-207ENST00000465461 UBTFL6P0CB48 400 aaPredicted RBP10.56□□□□□ -0.72
CUX1-207ENST00000465461 ANXA11P50995 505 aaKnown RBP10.56□□□□□ -0.72
CUX1-207ENST00000465461 TPD52P55327 224 aaPredicted RBP10.56□□□□□ -0.72
CUX1-207ENST00000465461 GFRA1P56159 465 aa10.56□□□□□ -0.72
CUX1-207ENST00000465461 MTPNP58546 118 aa10.56□□□□□ -0.72
CUX1-207ENST00000465461 HPCAP84074 193 aa10.56□□□□□ -0.72
CUX1-207ENST00000465461 PLAURQ03405 335 aa10.56□□□□□ -0.72
CUX1-207ENST00000465461 CDSNQ15517 529 aa10.56□□□□□ -0.72
CUX1-207ENST00000465461 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.56□□□□□ -0.723e-14■□□□□ 9.1
CUX1-207ENST00000465461 RUNDC3AQ59EK9 446 aa10.56□□□□□ -0.72
CUX1-207ENST00000465461 REP15Q6BDI9 236 aa10.56□□□□□ -0.72
CUX1-207ENST00000465461 LRRC74BQ6ZQY2 392 aa10.56□□□□□ -0.72
CUX1-207ENST00000465461 MTDHQ86UE4 582 aaKnown RBP10.56□□□□□ -0.72
CUX1-207ENST00000465461 TMCO5AQ8N6Q1 288 aa10.56□□□□□ -0.72
CUX1-207ENST00000465461 SLC38A5Q8WUX1 472 aa10.56□□□□□ -0.72
CUX1-207ENST00000465461 WDYHV1Q96HA8 205 aa10.56□□□□□ -0.72
CUX1-207ENST00000465461 TMEM19Q96HH6 336 aa10.56□□□□□ -0.72
CUX1-207ENST00000465461 TRNT1Q96Q11 434 aaKnown RBP10.56□□□□□ -0.72
CUX1-207ENST00000465461 DMRTA2Q96SC8 542 aa10.56□□□□□ -0.72
CUX1-207ENST00000465461 CPPED1Q9BRF8 314 aaPredicted RBP10.56□□□□□ -0.72
CUX1-207ENST00000465461 SAP130Q9H0E3 1048 aa10.56□□□□□ -0.72
CUX1-207ENST00000465461 MED17Q9NVC6 651 aa10.56□□□□□ -0.72
CUX1-207ENST00000465461 FAM53CQ9NYF3 392 aa10.56□□□□□ -0.72
CUX1-207ENST00000465461 P2RX2Q9UBL9 471 aa10.56□□□□□ -0.72
CUX1-207ENST00000465461 ZNF337Q9Y3M9 751 aa10.56□□□□□ -0.72
CUX1-207ENST00000465461 L3MBTL1Q9Y468 752 aa10.56□□□□□ -0.72
CUX1-207ENST00000465461 FAM215AQ9Y5M1 114 aa10.56□□□□□ -0.72
CUX1-207ENST00000465461 HIVEP3Q5T1R4 2406 aa10.56□□□□□ -0.72
CUX1-207ENST00000465461 TENM4Q6N022 2769 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 OR2M5A3KFT3 312 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 WIPF3A6NGB9 483 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 H3BML4 177 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 H3BNH8 94 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 ZNF264O43296 627 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 SNX3O60493 162 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 NUDT14O95848 222 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 UBL4AP11441 157 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 IL11P20809 199 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 ACVR2AP27037 513 aa10.55□□□□□ -0.72
CUX1-207ENST00000465461 PGM1P36871 562 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms