RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 PBLDP30039 288 aaPredicted RBP4.04□□□□□ -1.76
PTCD3-205ENST00000464541 HSPA1LP34931 641 aa4.04□□□□□ -1.76
PTCD3-205ENST00000464541 ASMTP46597 345 aa4.04□□□□□ -1.76
PTCD3-205ENST00000464541 HNMTP50135 292 aa4.04□□□□□ -1.76
PTCD3-205ENST00000464541 KARSQ15046 597 aaKnown RBP4.04□□□□□ -1.76
PTCD3-205ENST00000464541 PDK1Q15118 436 aa4.04□□□□□ -1.76
PTCD3-205ENST00000464541 RBM43Q6ZSC3 357 aaKnown RBP4.04□□□□□ -1.76
PTCD3-205ENST00000464541 Q7L0L9 218 aa4.04□□□□□ -1.76
PTCD3-205ENST00000464541 ELMOD2Q8IZ81 293 aa4.04□□□□□ -1.76
PTCD3-205ENST00000464541 COMMD4Q9H0A8 199 aa4.04□□□□□ -1.76
PTCD3-205ENST00000464541 SLC35D1Q9NTN3 355 aa4.04□□□□□ -1.76
PTCD3-205ENST00000464541 ERICH4A6NGS2 130 aa4.03□□□□□ -1.76
PTCD3-205ENST00000464541 WASHC1A8K0Z3 465 aa4.03□□□□□ -1.76
PTCD3-205ENST00000464541 K7ENP7 123 aa4.03□□□□□ -1.76
PTCD3-205ENST00000464541 SGK1O00141 431 aa4.03□□□□□ -1.76
PTCD3-205ENST00000464541 RASGRF2O14827 1237 aa4.03□□□□□ -1.76
PTCD3-205ENST00000464541 KLHL41O60662 606 aa4.03□□□□□ -1.76
PTCD3-205ENST00000464541 ANP32DO95626 131 aa4.03□□□□□ -1.76
PTCD3-205ENST00000464541 ACTL6AO96019 429 aa4.03□□□□□ -1.76
PTCD3-205ENST00000464541 SEMG1P04279 462 aa4.03□□□□□ -1.76
PTCD3-205ENST00000464541 ANXA4P09525 319 aaPredicted RBP4.03□□□□□ -1.76
PTCD3-205ENST00000464541 CPN1P15169 458 aa4.03□□□□□ -1.76
PTCD3-205ENST00000464541 CD1EP15812 388 aa4.03□□□□□ -1.76
PTCD3-205ENST00000464541 RIPK4P57078 832 aa4.03□□□□□ -1.76
PTCD3-205ENST00000464541 OTUD4Q01804 1114 aaKnown RBP4.03□□□□□ -1.76
PTCD3-205ENST00000464541 GABPB1Q06547 395 aaPredicted RBP4.03□□□□□ -1.76
PTCD3-205ENST00000464541 TFDP1Q14186 410 aa4.03□□□□□ -1.76
PTCD3-205ENST00000464541 CDKN3Q16667 212 aa4.03□□□□□ -1.76
PTCD3-205ENST00000464541 HSP90AB3PQ58FF7 597 aa4.03□□□□□ -1.76
PTCD3-205ENST00000464541 FRA10AC1Q70Z53 315 aa4.03□□□□□ -1.76
PTCD3-205ENST00000464541 SERPINA9Q86WD7 417 aa4.03□□□□□ -1.76
PTCD3-205ENST00000464541 IL1F10Q8WWZ1 152 aa4.03□□□□□ -1.76
PTCD3-205ENST00000464541 FGGYQ96C11 551 aa4.03□□□□□ -1.76
PTCD3-205ENST00000464541 TUBGCP3Q96CW5 907 aa4.03□□□□□ -1.76
PTCD3-205ENST00000464541 DHTKD1Q96HY7 919 aaPredicted RBP4.03□□□□□ -1.76
PTCD3-205ENST00000464541 CNDP1Q96KN2 507 aa4.03□□□□□ -1.76
PTCD3-205ENST00000464541 NFKBIZQ9BYH8 718 aa4.03□□□□□ -1.76
PTCD3-205ENST00000464541 ISG20L2Q9H9L3 353 aaKnown RBP4.03□□□□□ -1.76
PTCD3-205ENST00000464541 LPAR2Q9HBW0 351 aa4.03□□□□□ -1.76
PTCD3-205ENST00000464541 PCSK1NQ9UHG2 260 aa4.03□□□□□ -1.76
PTCD3-205ENST00000464541 CAB39Q9Y376 341 aaPredicted RBP4.03□□□□□ -1.76
PTCD3-205ENST00000464541 ARHGAP23Q9P227 1491 aa4.03□□□□□ -1.76
PTCD3-205ENST00000464541 ANKRD30BQ9BXX2 1392 aa4.02□□□□□ -1.77
PTCD3-205ENST00000464541 H0YCG3 227 aa4.02□□□□□ -1.77
PTCD3-205ENST00000464541 PDXKO00764 312 aa4.02□□□□□ -1.77
PTCD3-205ENST00000464541 GMFGO60234 142 aa4.02□□□□□ -1.77
PTCD3-205ENST00000464541 CHRNA1P02708 482 aa4.02□□□□□ -1.77
PTCD3-205ENST00000464541 PDHBP11177 359 aa4.02□□□□□ -1.77
PTCD3-205ENST00000464541 TOP1P11387 765 aaKnown RBP4.02□□□□□ -1.77
PTCD3-205ENST00000464541 PRG2P13727 222 aa4.02□□□□□ -1.77
PTCD3-205ENST00000464541 TSPAN8P19075 237 aa4.02□□□□□ -1.77
PTCD3-205ENST00000464541 OR3A4PP47883 348 aa4.02□□□□□ -1.77
PTCD3-205ENST00000464541 CAMLGP49069 296 aa4.02□□□□□ -1.77
PTCD3-205ENST00000464541 ARFIP1P53367 373 aa4.02□□□□□ -1.77
PTCD3-205ENST00000464541 IFT88Q13099 833 aa4.02□□□□□ -1.77
PTCD3-205ENST00000464541 DPYSL3Q14195 570 aa4.02□□□□□ -1.77
PTCD3-205ENST00000464541 KRTAP13-3Q3SY46 172 aa4.02□□□□□ -1.77
PTCD3-205ENST00000464541 LRRC23Q53EV4 343 aaPredicted RBP4.02□□□□□ -1.77
PTCD3-205ENST00000464541 HSP90B2PQ58FF3 399 aa4.02□□□□□ -1.77
PTCD3-205ENST00000464541 SPATA46Q5T0L3 261 aa4.02□□□□□ -1.77
PTCD3-205ENST00000464541 LRRC70Q7Z2Q7 622 aa4.02□□□□□ -1.77
PTCD3-205ENST00000464541 TRPM8Q7Z2W7 1104 aa4.02□□□□□ -1.77
PTCD3-205ENST00000464541 HSD11B1LQ7Z5J1 315 aa4.02□□□□□ -1.77
PTCD3-205ENST00000464541 PPP1R27Q86WC6 154 aa4.02□□□□□ -1.77
PTCD3-205ENST00000464541 THRSPQ92748 146 aa4.02□□□□□ -1.77
PTCD3-205ENST00000464541 LINC00167Q96N53 147 aa4.02□□□□□ -1.77
PTCD3-205ENST00000464541 RIBC2Q9H4K1 309 aa4.02□□□□□ -1.77
PTCD3-205ENST00000464541 COG4Q9H9E3 785 aa4.02□□□□□ -1.77
PTCD3-205ENST00000464541 SPRR3Q9UBC9 169 aa4.02□□□□□ -1.77
PTCD3-205ENST00000464541 SPASTQ9UBP0 616 aa4.02□□□□□ -1.77
PTCD3-205ENST00000464541 RPS6KB2Q9UBS0 482 aa4.02□□□□□ -1.77
PTCD3-205ENST00000464541 NUDCQ9Y266 331 aa4.02□□□□□ -1.77
PTCD3-205ENST00000464541 CLCA3PQ9Y6N3 262 aa4.02□□□□□ -1.77
PTCD3-205ENST00000464541 CCDC7Q96M83 1385 aa4.02□□□□□ -1.77
PTCD3-205ENST00000464541 FAM231BA6NCW3 169 aa4.01□□□□□ -1.77
PTCD3-205ENST00000464541 WASH3PC4AMC7 463 aa4.01□□□□□ -1.77
PTCD3-205ENST00000464541 TBL1XO60907 577 aa4.01□□□□□ -1.77
PTCD3-205ENST00000464541 UQCRBP14927 111 aa4.01□□□□□ -1.77
PTCD3-205ENST00000464541 RABIFP47224 123 aa4.01□□□□□ -1.77
PTCD3-205ENST00000464541 OSTNP61366 133 aa4.01□□□□□ -1.77
PTCD3-205ENST00000464541 BCL2L1Q07817 233 aa4.01□□□□□ -1.77
PTCD3-205ENST00000464541 ZNF154Q13106 437 aa4.01□□□□□ -1.77
PTCD3-205ENST00000464541 BOLA3Q53S33 107 aa4.01□□□□□ -1.77
PTCD3-205ENST00000464541 EOGTQ5NDL2 527 aa4.01□□□□□ -1.77
PTCD3-205ENST00000464541 C16orf87Q6PH81 154 aa4.01□□□□□ -1.77
PTCD3-205ENST00000464541 WASH2PQ6VEQ5 465 aa4.01□□□□□ -1.77
PTCD3-205ENST00000464541 TMEM179BQ7Z7N9 219 aa4.01□□□□□ -1.77
PTCD3-205ENST00000464541 ZSCAN4Q8NAM6 433 aaPredicted RBP4.01□□□□□ -1.77
PTCD3-205ENST00000464541 BBS1Q8NFJ9 593 aa4.01□□□□□ -1.77
PTCD3-205ENST00000464541 FCGR1BQ92637 280 aa4.01□□□□□ -1.77
PTCD3-205ENST00000464541 PSMG2Q969U7 264 aa4.01□□□□□ -1.77
PTCD3-205ENST00000464541 UPRTQ96BW1 309 aa4.01□□□□□ -1.77
PTCD3-205ENST00000464541 SMIM14Q96QK8 99 aa4.01□□□□□ -1.77
PTCD3-205ENST00000464541 CHMP4BQ9H444 224 aaKnown RBP4.01□□□□□ -1.77
PTCD3-205ENST00000464541 GPN2Q9H9Y4 310 aaPredicted RBP4.01□□□□□ -1.77
PTCD3-205ENST00000464541 C1orf123Q9NWV4 160 aa4.01□□□□□ -1.77
PTCD3-205ENST00000464541 AIPL1Q9NZN9 384 aa4.01□□□□□ -1.77
PTCD3-205ENST00000464541 ANKMY1Q9P2S6 941 aa4.01□□□□□ -1.77
PTCD3-205ENST00000464541 RNF6Q9Y252 685 aa4.01□□□□□ -1.77
PTCD3-205ENST00000464541 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms