RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 VEGFDO43915 354 aa14.89□□□□□ -0.03
SMC4-204ENST00000462787 SRPX2O60687 465 aaPredicted RBP14.89□□□□□ -0.03
SMC4-204ENST00000462787 SNAI1O95863 264 aaPredicted RBP14.89□□□□□ -0.03
SMC4-204ENST00000462787 SBK3P0C264 359 aa14.89□□□□□ -0.03
SMC4-204ENST00000462787 NR2C1P13056 603 aa14.89□□□□□ -0.03
SMC4-204ENST00000462787 GP1BBP13224 206 aa14.89□□□□□ -0.03
SMC4-204ENST00000462787 TUBG1P23258 451 aa14.89□□□□□ -0.03
SMC4-204ENST00000462787 GRPRP30550 384 aa14.89□□□□□ -0.03
SMC4-204ENST00000462787 TRIM23P36406 574 aa14.89□□□□□ -0.03
SMC4-204ENST00000462787 GAREM2Q75VX8 874 aa14.89□□□□□ -0.03
SMC4-204ENST00000462787 IFNL1Q8IU54 200 aa14.89□□□□□ -0.03
SMC4-204ENST00000462787 ZNF461Q8TAF7 563 aa14.89□□□□□ -0.03
SMC4-204ENST00000462787 GPR148Q8TDV2 347 aa14.89□□□□□ -0.03
SMC4-204ENST00000462787 EDDM13A0A1B0GTR0 161 aa14.89□□□□□ -0.03
SMC4-204ENST00000462787 RGS13O14921 159 aa14.89□□□□□ -0.03
SMC4-204ENST00000462787 DYRK1AQ13627 763 aa14.89□□□□□ -0.03
SMC4-204ENST00000462787 ZNF585AQ6P3V2 769 aa14.89□□□□□ -0.03
SMC4-204ENST00000462787 GPR26Q8NDV2 337 aa14.89□□□□□ -0.03
SMC4-204ENST00000462787 OR52N1Q8NH53 320 aa14.89□□□□□ -0.03
SMC4-204ENST00000462787 OR5B12Q96R08 314 aa14.89□□□□□ -0.03
SMC4-204ENST00000462787 ZNF587Q96SQ5 575 aaPredicted RBP14.89□□□□□ -0.03
SMC4-204ENST00000462787 ZDHHC4Q9NPG8 344 aa14.89□□□□□ -0.03
SMC4-204ENST00000462787 TMEM129A0AVI4 362 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 ZNF840PA6NDX5 716 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 CSTAP01040 98 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 CDK2P24941 298 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 AOAHP28039 575 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 CTNNB1P35222 781 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 TAS2R19P59542 299 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 ARF3P61204 181 aaPredicted RBP14.88□□□□□ -0.03
SMC4-204ENST00000462787 ARF1P84077 181 aaKnown RBP14.88□□□□□ -0.03
SMC4-204ENST00000462787 FAM124AQ86V42 546 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 NRSN1Q8IZ57 195 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 L3MBTL4Q8NA19 623 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 STEAP2Q8NFT2 490 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 FOXRED1Q96CU9 486 aaPredicted RBP14.88□□□□□ -0.03
SMC4-204ENST00000462787 ZMYND19Q96E35 227 aaPredicted RBP14.88□□□□□ -0.03
SMC4-204ENST00000462787 NECTIN4Q96NY8 510 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 IL17FQ96PD4 163 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 ARPC5LQ9BPX5 153 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 HRGP04196 525 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 SLC6A19Q695T7 634 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 TMEM239Q8WW34 195 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 ASB11Q8WXH4 323 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 SFXN2Q96NB2 322 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 DPH7Q9BTV6 452 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 LEFTY1O75610 366 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 IFNA1P01562 189 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 SLC11A1P49279 550 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 CHAF1BQ13112 559 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 DUSP7Q16829 419 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 ZNF674Q2M3X9 581 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 KIAA0319Q5VV43 1072 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 EID2Q8N6I1 236 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 KREMEN2Q8NCW0 462 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 OR4M1Q8NGD0 313 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 OR6F1Q8NGZ6 308 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 PITX2Q99697 317 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 SRRQ9GZT4 340 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 OR52D1Q9H346 318 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 SLC45A1Q9Y2W3 748 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 KCNK2O95069 426 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 CSF3P09919 207 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 SLC19A1P41440 591 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.88□□□□□ -0.032e-41■■■■■ 207.1
SMC4-204ENST00000462787 SPIN3Q5JUX0 258 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 CYB561A3Q8NBI2 242 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 SLC25A18Q9H1K4 315 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 C20orf85Q9H1P6 137 aa14.88□□□□□ -0.03
SMC4-204ENST00000462787 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.87□□□□□ -0.03
SMC4-204ENST00000462787 K7ERQ8 282 aa14.87□□□□□ -0.03
SMC4-204ENST00000462787 WASP42768 502 aa14.87□□□□□ -0.03
SMC4-204ENST00000462787 KIAA1024LP59773 190 aa14.87□□□□□ -0.03
SMC4-204ENST00000462787 C14orf28Q4W4Y0 310 aa14.87□□□□□ -0.03
SMC4-204ENST00000462787 LRRTM3Q86VH5 581 aa14.87□□□□□ -0.03
SMC4-204ENST00000462787 LRRC46Q96FV0 321 aa14.87□□□□□ -0.03
SMC4-204ENST00000462787 RBP7Q96R05 134 aa14.87□□□□□ -0.03
SMC4-204ENST00000462787 PAAF1Q9BRP4 392 aa14.87□□□□□ -0.03
SMC4-204ENST00000462787 TMEM38AQ9H6F2 299 aa14.87□□□□□ -0.03
SMC4-204ENST00000462787 C1GALT1Q9NS00 363 aa14.87□□□□□ -0.03
SMC4-204ENST00000462787 PRSS21Q9Y6M0 314 aa14.87□□□□□ -0.03
SMC4-204ENST00000462787 GGT3PA6NGU5 568 aa14.87□□□□□ -0.03
SMC4-204ENST00000462787 TVP23AA6NH52 213 aa14.87□□□□□ -0.03
SMC4-204ENST00000462787 SLC9B1P1A6NJY1 282 aa14.87□□□□□ -0.03
SMC4-204ENST00000462787 ZNF726A6NNF4 738 aa14.87□□□□□ -0.03
SMC4-204ENST00000462787 OR8U9P0C7N5 309 aa14.87□□□□□ -0.03
SMC4-204ENST00000462787 SNRPBP14678 240 aaKnown RBP14.87□□□□□ -0.03
SMC4-204ENST00000462787 AHRP35869 848 aa14.87□□□□□ -0.03
SMC4-204ENST00000462787 ACTR1BP42025 376 aa14.87□□□□□ -0.03
SMC4-204ENST00000462787 CCR9P51686 369 aa14.87□□□□□ -0.03
SMC4-204ENST00000462787 ACTR1AP61163 376 aa14.87□□□□□ -0.03
SMC4-204ENST00000462787 HMGN3Q15651 99 aa14.87□□□□□ -0.03
SMC4-204ENST00000462787 RPL22L1Q6P5R6 122 aaKnown RBP14.87□□□□□ -0.03
SMC4-204ENST00000462787 ZNF440Q8IYI8 595 aa14.87□□□□□ -0.03
SMC4-204ENST00000462787 NLGN4XQ8N0W4 816 aa14.87□□□□□ -0.03
SMC4-204ENST00000462787 VRK1Q99986 396 aaPredicted RBP14.87□□□□□ -0.03
SMC4-204ENST00000462787 C1QTNF3Q9BXJ4 246 aa14.87□□□□□ -0.03
SMC4-204ENST00000462787 QRSL1Q9H0R6 528 aaKnown RBP14.87□□□□□ -0.03
SMC4-204ENST00000462787 LTB4R2Q9NPC1 389 aa14.87□□□□□ -0.03
SMC4-204ENST00000462787 SLCO3A1Q9UIG8 710 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms